RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 HAVCR1Q96D42 359 aa3.37□□□□□ -1.87
SMC4-218ENST00000486711 SLC25A38Q96DW6 304 aa3.37□□□□□ -1.87
SMC4-218ENST00000486711 IL4I1Q96RQ9 567 aa3.37□□□□□ -1.87
SMC4-218ENST00000486711 MAPKAP1Q9BPZ7 522 aa3.37□□□□□ -1.87
SMC4-218ENST00000486711 PTGES2Q9H7Z7 377 aa3.37□□□□□ -1.87
SMC4-218ENST00000486711 TNFRSF19Q9NS68 423 aa3.37□□□□□ -1.87
SMC4-218ENST00000486711 VNN3Q9NY84 501 aa3.37□□□□□ -1.87
SMC4-218ENST00000486711 SIGLEC8Q9NYZ4 499 aa3.37□□□□□ -1.87
SMC4-218ENST00000486711 PHF11Q9UIL8 331 aa3.37□□□□□ -1.87
SMC4-218ENST00000486711 CDH9Q9ULB4 789 aa3.37□□□□□ -1.87
SMC4-218ENST00000486711 COPS3Q9UNS2 423 aa3.37□□□□□ -1.87
SMC4-218ENST00000486711 IKBKGQ9Y6K9 419 aa3.37□□□□□ -1.87
SMC4-218ENST00000486711 TRAV26-1A0A087WT03 109 aa3.36□□□□□ -1.87
SMC4-218ENST00000486711 IGHV7-81A0A0B4J1V7 117 aa3.36□□□□□ -1.87
SMC4-218ENST00000486711 KLF18A0A0U1RQI7 1052 aa3.36□□□□□ -1.87
SMC4-218ENST00000486711 ZNF705EA8MWA4 302 aaPredicted RBP3.36□□□□□ -1.87
SMC4-218ENST00000486711 F5H6K3 240 aa3.36□□□□□ -1.87
SMC4-218ENST00000486711 OR10H3O60404 316 aa3.36□□□□□ -1.87
SMC4-218ENST00000486711 ECI2O75521 394 aa3.36□□□□□ -1.87
SMC4-218ENST00000486711 LYPLA1O75608 230 aaPredicted RBP3.36□□□□□ -1.87
SMC4-218ENST00000486711 IGLL1P15814 213 aa3.36□□□□□ -1.87
SMC4-218ENST00000486711 POLR2EP19388 210 aaKnown RBP3.36□□□□□ -1.87
SMC4-218ENST00000486711 MMP11P24347 488 aa3.36□□□□□ -1.87
SMC4-218ENST00000486711 RPL13AP40429 203 aaKnown RBP3.36□□□□□ -1.87
SMC4-218ENST00000486711 LEPP41159 167 aa3.36□□□□□ -1.87
SMC4-218ENST00000486711 GRIA1P42261 906 aa3.36□□□□□ -1.87
SMC4-218ENST00000486711 HNRNPA3P51991 378 aaKnown RBP3.36□□□□□ -1.87
SMC4-218ENST00000486711 HSPA2P54652 639 aa3.36□□□□□ -1.87
SMC4-218ENST00000486711 AIF1P55008 147 aa3.36□□□□□ -1.87
SMC4-218ENST00000486711 RPS8P62241 208 aaKnown RBP3.36□□□□□ -1.87
SMC4-218ENST00000486711 IGLV3-21P80748 117 aaPredicted RBP3.36□□□□□ -1.87
SMC4-218ENST00000486711 KLRC3Q07444 240 aa3.36□□□□□ -1.87
SMC4-218ENST00000486711 DPYSL2Q16555 572 aa3.36□□□□□ -1.87
SMC4-218ENST00000486711 CEP55Q53EZ4 464 aa3.36□□□□□ -1.87
SMC4-218ENST00000486711 ZSCAN25Q6NSZ9 544 aa3.36□□□□□ -1.87
SMC4-218ENST00000486711 CXCL17Q6UXB2 119 aa3.36□□□□□ -1.87
SMC4-218ENST00000486711 SKA3Q8IX90 412 aa3.36□□□□□ -1.87
SMC4-218ENST00000486711 CCDC65Q8IXS2 484 aa3.36□□□□□ -1.87
SMC4-218ENST00000486711 ZNF679Q8IYX0 411 aa3.36□□□□□ -1.87
SMC4-218ENST00000486711 EIF1ADQ8N9N8 165 aaKnown RBP3.36□□□□□ -1.87
SMC4-218ENST00000486711 BHLHE23Q8NDY6 225 aa3.36□□□□□ -1.87
SMC4-218ENST00000486711 OR4D9Q8NGE8 314 aa3.36□□□□□ -1.87
SMC4-218ENST00000486711 ZNF606Q8WXB4 792 aa3.36□□□□□ -1.87
SMC4-218ENST00000486711 RAPGEF5Q92565 580 aa3.36□□□□□ -1.87
SMC4-218ENST00000486711 NEIL2Q969S2 332 aa3.36□□□□□ -1.87
SMC4-218ENST00000486711 EFHD2Q96C19 240 aaPredicted RBP3.36□□□□□ -1.87
SMC4-218ENST00000486711 PSKH2Q96QS6 385 aa3.36□□□□□ -1.87
SMC4-218ENST00000486711 ZBTB18Q99592 522 aa3.36□□□□□ -1.87
SMC4-218ENST00000486711 NPAS2Q99743 824 aa3.36□□□□□ -1.87
SMC4-218ENST00000486711 TMEM43Q9BTV4 400 aa3.36□□□□□ -1.87
SMC4-218ENST00000486711 CAPS2Q9BXY5 557 aa3.36□□□□□ -1.87
SMC4-218ENST00000486711 CHIAQ9BZP6 476 aa3.36□□□□□ -1.87
SMC4-218ENST00000486711 NMUR2Q9GZQ4 415 aa3.36□□□□□ -1.87
SMC4-218ENST00000486711 LRRN3Q9H3W5 708 aa3.36□□□□□ -1.87
SMC4-218ENST00000486711 EHD1Q9H4M9 534 aa3.36□□□□□ -1.87
SMC4-218ENST00000486711 SMOXQ9NWM0 555 aa3.36□□□□□ -1.87
SMC4-218ENST00000486711 B3GNT2Q9NY97 397 aa3.36□□□□□ -1.87
SMC4-218ENST00000486711 DCDC2Q9UHG0 476 aa3.36□□□□□ -1.87
SMC4-218ENST00000486711 ANGPTL2Q9UKU9 493 aa3.36□□□□□ -1.87
SMC4-218ENST00000486711 CLSPNQ9HAW4 1339 aa3.36□□□□□ -1.87
SMC4-218ENST00000486711 A0A1B0GWB2 263 aa3.35□□□□□ -1.87
SMC4-218ENST00000486711 TRDCB7Z8K6 153 aa3.35□□□□□ -1.87
SMC4-218ENST00000486711 HIP1O00291 1037 aa3.35□□□□□ -1.87
SMC4-218ENST00000486711 CXCL13O43927 109 aa3.35□□□□□ -1.87
SMC4-218ENST00000486711 SLITRK3O94933 977 aa3.35□□□□□ -1.87
SMC4-218ENST00000486711 AP2A1O95782 977 aa3.35□□□□□ -1.87
SMC4-218ENST00000486711 OPN1MWP04001 364 aa3.35□□□□□ -1.87
SMC4-218ENST00000486711 GIG44P09565 113 aaPredicted RBP3.35□□□□□ -1.87
SMC4-218ENST00000486711 OPN1MW2P0DN77 364 aa3.35□□□□□ -1.87
SMC4-218ENST00000486711 OPN1MW3P0DN78 364 aa3.35□□□□□ -1.87
SMC4-218ENST00000486711 KLK2P20151 261 aa3.35□□□□□ -1.87
SMC4-218ENST00000486711 PSMB1P20618 241 aaKnown RBP3.35□□□□□ -1.87
SMC4-218ENST00000486711 GCAP28676 217 aa3.35□□□□□ -1.87
SMC4-218ENST00000486711 UBE2HP62256 183 aa3.35□□□□□ -1.87
SMC4-218ENST00000486711 CCDC173Q0VFZ6 552 aa3.35□□□□□ -1.87
SMC4-218ENST00000486711 ZMYND11Q15326 602 aa3.35□□□□□ -1.87
SMC4-218ENST00000486711 KYAT1Q16773 422 aa3.35□□□□□ -1.87
SMC4-218ENST00000486711 ISXQ2M1V0 245 aa3.35□□□□□ -1.87
SMC4-218ENST00000486711 EFL1Q7Z2Z2 1120 aaKnown RBP3.35□□□□□ -1.87
SMC4-218ENST00000486711 HSD17B13Q7Z5P4 300 aaPredicted RBP3.35□□□□□ -1.87
SMC4-218ENST00000486711 PPP1R27Q86WC6 154 aa3.35□□□□□ -1.87
SMC4-218ENST00000486711 FBXO16Q8IX29 292 aaPredicted RBP3.35□□□□□ -1.87
SMC4-218ENST00000486711 ZNF100Q8IYN0 542 aa3.35□□□□□ -1.87
SMC4-218ENST00000486711 SVOPLQ8N434 492 aa3.35□□□□□ -1.87
SMC4-218ENST00000486711 HTR3CQ8WXA8 447 aa3.35□□□□□ -1.87
SMC4-218ENST00000486711 FAM122AQ96E09 287 aa3.35□□□□□ -1.87
SMC4-218ENST00000486711 SLC41A3Q96GZ6 507 aa3.35□□□□□ -1.87
SMC4-218ENST00000486711 COQ2Q96H96 371 aa3.35□□□□□ -1.87
SMC4-218ENST00000486711 B3GALT6Q96L58 329 aa3.35□□□□□ -1.87
SMC4-218ENST00000486711 MAGEB18Q96M61 343 aa3.35□□□□□ -1.87
SMC4-218ENST00000486711 SMIM14Q96QK8 99 aa3.35□□□□□ -1.87
SMC4-218ENST00000486711 SRXN1Q9BYN0 137 aa3.35□□□□□ -1.87
SMC4-218ENST00000486711 RAB34Q9BZG1 259 aa3.35□□□□□ -1.87
SMC4-218ENST00000486711 ZNF702PQ9H963 129 aa3.35□□□□□ -1.87
SMC4-218ENST00000486711 PRPF19Q9UMS4 504 aaKnown RBP3.35□□□□□ -1.87
SMC4-218ENST00000486711 UBQLN1Q9UMX0 589 aaKnown RBP3.35□□□□□ -1.87
SMC4-218ENST00000486711 MOKQ9UQ07 419 aa3.35□□□□□ -1.87
SMC4-218ENST00000486711 MEMO1Q9Y316 297 aa3.35□□□□□ -1.87
SMC4-218ENST00000486711 TIMM10BQ9Y5J6 103 aa3.35□□□□□ -1.87
SMC4-218ENST00000486711 PNPLA6Q8IY17 1366 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms