RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 SNRNP35Q16560 246 aaKnown RBP3.39□□□□□ -1.87
SMARCC1-207ENST00000485833 C14orf28Q4W4Y0 310 aa3.39□□□□□ -1.87
SMARCC1-207ENST00000485833 RFTN2Q52LD8 501 aaPredicted RBP3.39□□□□□ -1.87
SMARCC1-207ENST00000485833 NHLRC3Q5JS37 347 aa3.39□□□□□ -1.87
SMARCC1-207ENST00000485833 C1orf220Q5T0J3 134 aa3.39□□□□□ -1.87
SMARCC1-207ENST00000485833 MPP7Q5T2T1 576 aa3.39□□□□□ -1.87
SMARCC1-207ENST00000485833 SPECC1LQ69YQ0 1117 aa3.39□□□□□ -1.87
SMARCC1-207ENST00000485833 PM20D1Q6GTS8 502 aa3.39□□□□□ -1.87
SMARCC1-207ENST00000485833 CCBE1Q6UXH8 406 aaPredicted RBP3.39□□□□□ -1.87
SMARCC1-207ENST00000485833 C17orf107Q6ZR85 190 aa3.39□□□□□ -1.87
SMARCC1-207ENST00000485833 NCCRP1Q6ZVX7 275 aaPredicted RBP3.39□□□□□ -1.87
SMARCC1-207ENST00000485833 MEX3DQ86XN8 651 aaKnown RBP3.39□□□□□ -1.87
SMARCC1-207ENST00000485833 SYCP3Q8IZU3 236 aa3.39□□□□□ -1.87
SMARCC1-207ENST00000485833 SLC43A2Q8N370 569 aa3.39□□□□□ -1.87
SMARCC1-207ENST00000485833 FDCSPQ8NFU4 85 aa3.39□□□□□ -1.87
SMARCC1-207ENST00000485833 OR6K2Q8NGY2 324 aa3.39□□□□□ -1.87
SMARCC1-207ENST00000485833 KIAA1524Q8TCG1 905 aa3.39□□□□□ -1.87
SMARCC1-207ENST00000485833 RFT1Q96AA3 541 aa3.39□□□□□ -1.87
SMARCC1-207ENST00000485833 KIAA1143Q96AT1 154 aaPredicted RBP3.39□□□□□ -1.87
SMARCC1-207ENST00000485833 TMEM159Q96B96 161 aa3.39□□□□□ -1.87
SMARCC1-207ENST00000485833 CYYR1Q96J86 154 aa3.39□□□□□ -1.87
SMARCC1-207ENST00000485833 RADILQ96JH8 1075 aa3.39□□□□□ -1.87
SMARCC1-207ENST00000485833 TMEM121Q9BTD3 319 aa3.39□□□□□ -1.87
SMARCC1-207ENST00000485833 DUSP16Q9BY84 665 aa3.39□□□□□ -1.87
SMARCC1-207ENST00000485833 SUDS3Q9H7L9 328 aaPredicted RBP3.39□□□□□ -1.87
SMARCC1-207ENST00000485833 PLEKHA3Q9HB20 300 aa3.39□□□□□ -1.87
SMARCC1-207ENST00000485833 PFDN4Q9NQP4 134 aa3.39□□□□□ -1.87
SMARCC1-207ENST00000485833 ZNF346Q9UL40 294 aaKnown RBP3.39□□□□□ -1.87
SMARCC1-207ENST00000485833 HBS1LQ9Y450 684 aaKnown RBP3.39□□□□□ -1.87
SMARCC1-207ENST00000485833 SNX10Q9Y5X0 201 aa3.39□□□□□ -1.87
SMARCC1-207ENST00000485833 NBEAL2Q6ZNJ1 2754 aa3.39□□□□□ -1.87
SMARCC1-207ENST00000485833 INTS1Q8N201 2190 aaKnown RBP3.38□□□□□ -1.87
SMARCC1-207ENST00000485833 IGHV1OR21-1A0A087WYE8 117 aa3.38□□□□□ -1.87
SMARCC1-207ENST00000485833 C2orf92A0A1B0GVN3 265 aa3.38□□□□□ -1.87
SMARCC1-207ENST00000485833 LOC390937A0A1W2PQ73 354 aa3.38□□□□□ -1.87
SMARCC1-207ENST00000485833 PLOD3O60568 738 aa3.38□□□□□ -1.87
SMARCC1-207ENST00000485833 GBAP04062 536 aa3.38□□□□□ -1.87
SMARCC1-207ENST00000485833 QDPRP09417 244 aa3.38□□□□□ -1.87
SMARCC1-207ENST00000485833 ANKRD34CP0C6C1 535 aa3.38□□□□□ -1.87
SMARCC1-207ENST00000485833 ZNF18P17022 549 aa3.38□□□□□ -1.87
SMARCC1-207ENST00000485833 AK4P27144 223 aaPredicted RBP3.38□□□□□ -1.87
SMARCC1-207ENST00000485833 SRD5A2P31213 254 aa3.38□□□□□ -1.87
SMARCC1-207ENST00000485833 CA5AP35218 305 aa3.38□□□□□ -1.87
SMARCC1-207ENST00000485833 RPL34P49207 117 aaKnown RBP3.38□□□□□ -1.87
SMARCC1-207ENST00000485833 SRP54P61011 504 aaKnown RBP3.38□□□□□ -1.87
SMARCC1-207ENST00000485833 RPS21P63220 83 aaKnown RBP3.38□□□□□ -1.87
SMARCC1-207ENST00000485833 RBBP4Q09028 425 aa3.38□□□□□ -1.87
SMARCC1-207ENST00000485833 INCA1Q0VD86 236 aa3.38□□□□□ -1.87
SMARCC1-207ENST00000485833 FASTKQ14296 549 aaKnown RBP3.38□□□□□ -1.87
SMARCC1-207ENST00000485833 WSCD2Q2TBF2 565 aa3.38□□□□□ -1.87
SMARCC1-207ENST00000485833 ARMCX4Q5H9R4 360 aa3.38□□□□□ -1.87
SMARCC1-207ENST00000485833 DCAF12Q5T6F0 453 aa3.38□□□□□ -1.87
SMARCC1-207ENST00000485833 LINC00242Q5T6M2 205 aa3.38□□□□□ -1.87
SMARCC1-207ENST00000485833 RSBN1Q5VWQ0 802 aaPredicted RBP3.38□□□□□ -1.87
SMARCC1-207ENST00000485833 NEK5Q6P3R8 708 aa3.38□□□□□ -1.87
SMARCC1-207ENST00000485833 FAM199XQ6PEV8 388 aaPredicted RBP3.38□□□□□ -1.87
SMARCC1-207ENST00000485833 SPATA21Q7Z572 469 aa3.38□□□□□ -1.87
SMARCC1-207ENST00000485833 TAC4Q86UU9 113 aa3.38□□□□□ -1.87
SMARCC1-207ENST00000485833 C17orf82Q86X59 251 aaPredicted RBP3.38□□□□□ -1.87
SMARCC1-207ENST00000485833 HSCBQ8IWL3 235 aa3.38□□□□□ -1.87
SMARCC1-207ENST00000485833 Q8N7P7 452 aa3.38□□□□□ -1.87
SMARCC1-207ENST00000485833 OR6F1Q8NGZ6 308 aa3.38□□□□□ -1.87
SMARCC1-207ENST00000485833 UBA3Q8TBC4 463 aa3.38□□□□□ -1.87
SMARCC1-207ENST00000485833 DQX1Q8TE96 717 aaKnown RBP3.38□□□□□ -1.87
SMARCC1-207ENST00000485833 CT55Q8WUE5 264 aa3.38□□□□□ -1.87
SMARCC1-207ENST00000485833 LIPHQ8WWY8 451 aa3.38□□□□□ -1.87
SMARCC1-207ENST00000485833 SMPDL3AQ92484 453 aa3.38□□□□□ -1.87
SMARCC1-207ENST00000485833 RIT1Q92963 219 aa3.38□□□□□ -1.87
SMARCC1-207ENST00000485833 SYAP1Q96A49 352 aaPredicted RBP3.38□□□□□ -1.87
SMARCC1-207ENST00000485833 PNPLA2Q96AD5 504 aa3.38□□□□□ -1.87
SMARCC1-207ENST00000485833 EPSTI1Q96J88 318 aa3.38□□□□□ -1.87
SMARCC1-207ENST00000485833 ELMO2Q96JJ3 720 aa3.38□□□□□ -1.87
SMARCC1-207ENST00000485833 C8orf76Q96K31 380 aa3.38□□□□□ -1.87
SMARCC1-207ENST00000485833 RCHY1Q96PM5 261 aa3.38□□□□□ -1.87
SMARCC1-207ENST00000485833 PRMT1Q99873 361 aaKnown RBP3.38□□□□□ -1.87
SMARCC1-207ENST00000485833 FERMT1Q9BQL6 677 aa3.38□□□□□ -1.87
SMARCC1-207ENST00000485833 LIME1Q9H400 295 aa3.38□□□□□ -1.87
SMARCC1-207ENST00000485833 AGPAT3Q9NRZ7 376 aa3.38□□□□□ -1.87
SMARCC1-207ENST00000485833 CHCHD3Q9NX63 227 aaKnown RBP3.38□□□□□ -1.87
SMARCC1-207ENST00000485833 MGAT4AQ9UM21 535 aa3.38□□□□□ -1.87
SMARCC1-207ENST00000485833 DOCK4Q8N1I0 1966 aa3.38□□□□□ -1.87
SMARCC1-207ENST00000485833 A0A0D9SEW6 157 aa3.37□□□□□ -1.87
SMARCC1-207ENST00000485833 C5orf52A6NGY3 159 aa3.37□□□□□ -1.87
SMARCC1-207ENST00000485833 ALOX15BO15296 676 aa3.37□□□□□ -1.87
SMARCC1-207ENST00000485833 NUDT21O43809 227 aaKnown RBP3.37□□□□□ -1.87
SMARCC1-207ENST00000485833 SCO2O43819 266 aa3.37□□□□□ -1.87
SMARCC1-207ENST00000485833 KIAA0754O94854 1291 aa3.37□□□□□ -1.87
SMARCC1-207ENST00000485833 CD160O95971 181 aa3.37□□□□□ -1.87
SMARCC1-207ENST00000485833 ASS1P00966 412 aaKnown RBP3.37□□□□□ -1.87
SMARCC1-207ENST00000485833 HLA-DRAP01903 254 aa3.37□□□□□ -1.87
SMARCC1-207ENST00000485833 FGF1P05230 155 aa3.37□□□□□ -1.87
SMARCC1-207ENST00000485833 VIMP08670 466 aaKnown RBP3.37□□□□□ -1.87
SMARCC1-207ENST00000485833 FAM58BPP0C7Q3 252 aa3.37□□□□□ -1.87
SMARCC1-207ENST00000485833 CTSEP14091 401 aa3.37□□□□□ -1.87
SMARCC1-207ENST00000485833 COX6B1P14854 86 aa3.37□□□□□ -1.87
SMARCC1-207ENST00000485833 CASP1P29466 404 aa3.37□□□□□ -1.87
SMARCC1-207ENST00000485833 TIA1P31483 386 aaKnown RBP eCLIP3.37□□□□□ -1.87
SMARCC1-207ENST00000485833 SPRP35270 261 aaPredicted RBP3.37□□□□□ -1.87
SMARCC1-207ENST00000485833 OR3A1P47881 315 aa3.37□□□□□ -1.87
SMARCC1-207ENST00000485833 PLK1P53350 603 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms