RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 GRINAQ7Z429 371 aa17.15■□□□□ 0.34
SNX17-206ENST00000484886 KRT73Q86Y46 540 aa17.15■□□□□ 0.34
SNX17-206ENST00000484886 C10orf111Q8N326 155 aa17.15■□□□□ 0.34
SNX17-206ENST00000484886 C10orf82Q8WW14 230 aa17.15■□□□□ 0.34
SNX17-206ENST00000484886 ROBO4Q8WZ75 1007 aa17.15■□□□□ 0.34
SNX17-206ENST00000484886 CPNE4Q96A23 557 aaPredicted RBP17.15■□□□□ 0.34
SNX17-206ENST00000484886 ANKRD27Q96NW4 1050 aa17.15■□□□□ 0.34
SNX17-206ENST00000484886 FAM107BQ9H098 131 aa17.15■□□□□ 0.34
SNX17-206ENST00000484886 SLC24A3Q9HC58 644 aa17.15■□□□□ 0.34
SNX17-206ENST00000484886 BCL2L10Q9HD36 194 aa17.15■□□□□ 0.34
SNX17-206ENST00000484886 EMC9Q9Y3B6 208 aa17.15■□□□□ 0.34
SNX17-206ENST00000484886 CAPN7Q9Y6W3 813 aa17.15■□□□□ 0.34
SNX17-206ENST00000484886 ADAM11O75078 769 aa17.14■□□□□ 0.33
SNX17-206ENST00000484886 TNFSF13O75888 250 aa17.14■□□□□ 0.33
SNX17-206ENST00000484886 PABPC4LP0CB38 370 aaKnown RBP17.14■□□□□ 0.33
SNX17-206ENST00000484886 HTR3AP46098 478 aa17.14■□□□□ 0.33
SNX17-206ENST00000484886 COPZ1P61923 177 aa17.14■□□□□ 0.33
SNX17-206ENST00000484886 EPS8Q12929 822 aa17.14■□□□□ 0.33
SNX17-206ENST00000484886 ZNF239Q16600 458 aaKnown RBP17.14■□□□□ 0.33
SNX17-206ENST00000484886 ZSWIM7Q19AV6 140 aa17.14■□□□□ 0.33
SNX17-206ENST00000484886 FBXL19-AS1Q494R0 122 aa17.14■□□□□ 0.33
SNX17-206ENST00000484886 SNX32Q86XE0 403 aa17.14■□□□□ 0.33
SNX17-206ENST00000484886 KIF18BQ86Y91 864 aa17.14■□□□□ 0.33
SNX17-206ENST00000484886 CADM2Q8N3J6 435 aa17.14■□□□□ 0.33
SNX17-206ENST00000484886 ACBD4Q8NC06 268 aa17.14■□□□□ 0.33
SNX17-206ENST00000484886 SLC25A43Q8WUT9 341 aaPredicted RBP17.14■□□□□ 0.33
SNX17-206ENST00000484886 CCDC106Q9BWC9 280 aa17.14■□□□□ 0.33
SNX17-206ENST00000484886 SPATA9Q9BWV2 254 aa17.14■□□□□ 0.33
SNX17-206ENST00000484886 SRXN1Q9BYN0 137 aa17.14■□□□□ 0.33
SNX17-206ENST00000484886 CHRNA9Q9UGM1 479 aa17.14■□□□□ 0.33
SNX17-206ENST00000484886 ANGPT4Q9Y264 503 aa17.14■□□□□ 0.33
SNX17-206ENST00000484886 GMEB1Q9Y692 573 aa17.14■□□□□ 0.33
SNX17-206ENST00000484886 LOC100653049A0A140TA62 436 aa17.13■□□□□ 0.33
SNX17-206ENST00000484886 FBP2O00757 339 aa17.13■□□□□ 0.33
SNX17-206ENST00000484886 MRASO14807 208 aa17.13■□□□□ 0.33
SNX17-206ENST00000484886 KRT34O76011 436 aa17.13■□□□□ 0.33
SNX17-206ENST00000484886 ETS2P15036 469 aa17.13■□□□□ 0.33
SNX17-206ENST00000484886 AQP1P29972 269 aa17.13■□□□□ 0.33
SNX17-206ENST00000484886 SSTR2P30874 369 aa17.13■□□□□ 0.33
SNX17-206ENST00000484886 PEX19P40855 299 aa17.13■□□□□ 0.33
SNX17-206ENST00000484886 KIR2DL2P43627 348 aaPredicted RBP17.13■□□□□ 0.33
SNX17-206ENST00000484886 KIR2DL3P43628 341 aa17.13■□□□□ 0.33
SNX17-206ENST00000484886 POLR2HP52434 150 aaKnown RBP17.13■□□□□ 0.33
SNX17-206ENST00000484886 CYLC2Q14093 348 aaPredicted RBP17.13■□□□□ 0.33
SNX17-206ENST00000484886 SELPLGQ14242 412 aa17.13■□□□□ 0.33
SNX17-206ENST00000484886 TRMT5Q32P41 509 aaKnown RBP17.13■□□□□ 0.33
SNX17-206ENST00000484886 SYT14P1Q58G82 188 aa17.13■□□□□ 0.33
SNX17-206ENST00000484886 REP15Q6BDI9 236 aa17.13■□□□□ 0.33
SNX17-206ENST00000484886 GTF2IRD2BQ6EKJ0 949 aa17.13■□□□□ 0.33
SNX17-206ENST00000484886 FCRLAQ7L513 359 aa17.13■□□□□ 0.33
SNX17-206ENST00000484886 FAM214BQ7L5A3 538 aa17.13■□□□□ 0.33
SNX17-206ENST00000484886 ZNF550Q7Z398 422 aa17.13■□□□□ 0.33
SNX17-206ENST00000484886 BTLAQ7Z6A9 289 aa17.13■□□□□ 0.33
SNX17-206ENST00000484886 GTF2IRD2Q86UP8 949 aa17.13■□□□□ 0.33
SNX17-206ENST00000484886 CLIP4Q8N3C7 705 aa17.13■□□□□ 0.33
SNX17-206ENST00000484886 STARD4Q96DR4 205 aa17.13■□□□□ 0.33
SNX17-206ENST00000484886 GMPPAQ96IJ6 420 aaPredicted RBP17.13■□□□□ 0.33
SNX17-206ENST00000484886 ZNF559Q9BR84 538 aa17.13■□□□□ 0.33
SNX17-206ENST00000484886 SPATA5L1Q9BVQ7 753 aa17.13■□□□□ 0.33
SNX17-206ENST00000484886 NSRP1Q9H0G5 558 aaKnown RBP17.13■□□□□ 0.33
SNX17-206ENST00000484886 OPN3Q9H1Y3 402 aaPredicted RBP17.13■□□□□ 0.33
SNX17-206ENST00000484886 TMEM38AQ9H6F2 299 aa17.13■□□□□ 0.33
SNX17-206ENST00000484886 COQ10BQ9H8M1 238 aa17.13■□□□□ 0.33
SNX17-206ENST00000484886 GALNT8Q9NY28 637 aa17.13■□□□□ 0.33
SNX17-206ENST00000484886 JKAMPQ9P055 326 aa17.13■□□□□ 0.33
SNX17-206ENST00000484886 ARMCX1Q9P291 453 aa17.13■□□□□ 0.33
SNX17-206ENST00000484886 PROCRQ9UNN8 238 aa17.13■□□□□ 0.33
SNX17-206ENST00000484886 CELSR2Q9HCU4 2923 aa17.12■□□□□ 0.33
SNX17-206ENST00000484886 TMED7-TICAM2A0A0A6YYA0 188 aa17.12■□□□□ 0.33
SNX17-206ENST00000484886 BBIP1A8MTZ0 92 aa17.12■□□□□ 0.33
SNX17-206ENST00000484886 SULT2B1O00204 365 aa17.12■□□□□ 0.33
SNX17-206ENST00000484886 TACR3P29371 465 aa17.12■□□□□ 0.33
SNX17-206ENST00000484886 SLC1A3P43003 542 aa17.12■□□□□ 0.33
SNX17-206ENST00000484886 KCNJ5P48544 419 aa17.12■□□□□ 0.33
SNX17-206ENST00000484886 SEC24CP53992 1094 aa17.12■□□□□ 0.33
SNX17-206ENST00000484886 TLE4Q04727 773 aa17.12■□□□□ 0.33
SNX17-206ENST00000484886 SPATA21Q7Z572 469 aa17.12■□□□□ 0.33
SNX17-206ENST00000484886 ZNF295-AS1Q8N0V1 137 aa17.12■□□□□ 0.33
SNX17-206ENST00000484886 C11orf65Q8NCR3 313 aa17.12■□□□□ 0.33
SNX17-206ENST00000484886 HIPK4Q8NE63 616 aa17.12■□□□□ 0.33
SNX17-206ENST00000484886 DNAJA3Q96EY1 480 aa17.12■□□□□ 0.33
SNX17-206ENST00000484886 ZNF607Q96SK3 696 aa17.12■□□□□ 0.33
SNX17-206ENST00000484886 ELAC2Q9BQ52 826 aaKnown RBP17.12■□□□□ 0.33
SNX17-206ENST00000484886 SLC39A3Q9BRY0 314 aa17.12■□□□□ 0.33
SNX17-206ENST00000484886 GLRX2Q9NS18 164 aa17.12■□□□□ 0.33
SNX17-206ENST00000484886 KCNN3Q9UGI6 736 aa17.12■□□□□ 0.33
SNX17-206ENST00000484886 SLC13A4Q9UKG4 626 aa17.12■□□□□ 0.33
SNX17-206ENST00000484886 TMED7Q9Y3B3 224 aa17.12■□□□□ 0.33
SNX17-206ENST00000484886 IGHV3-15A0A0B4J1V0 119 aa17.11■□□□□ 0.33
SNX17-206ENST00000484886 FAAHO00519 579 aa17.11■□□□□ 0.33
SNX17-206ENST00000484886 DYNC1I1O14576 645 aa17.11■□□□□ 0.33
SNX17-206ENST00000484886 MSTNO14793 375 aa17.11■□□□□ 0.33
SNX17-206ENST00000484886 FRS3O43559 492 aa17.11■□□□□ 0.33
SNX17-206ENST00000484886 DIO1P49895 249 aa17.11■□□□□ 0.33
SNX17-206ENST00000484886 GYS2P54840 703 aa17.11■□□□□ 0.33
SNX17-206ENST00000484886 RAC3P60763 192 aa17.11■□□□□ 0.33
SNX17-206ENST00000484886 CSNK2A1P68400 391 aaPredicted RBP17.11■□□□□ 0.33
SNX17-206ENST00000484886 RNPS1Q15287 305 aaKnown RBP17.11■□□□□ 0.33
SNX17-206ENST00000484886 WBP2NLQ6ICG8 309 aa17.11■□□□□ 0.33
SNX17-206ENST00000484886 CPLX4Q7Z7G2 160 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms