RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 CDC20BQ86Y33 519 aa10.96□□□□□ -0.65
MSH5-216ENST00000484309 TUSC5Q8IXB3 177 aa10.96□□□□□ -0.65
MSH5-216ENST00000484309 PEX5LQ8IYB4 626 aa10.96□□□□□ -0.65
MSH5-216ENST00000484309 OR52P1PQ8NH57 321 aa10.96□□□□□ -0.65
MSH5-216ENST00000484309 SLC38A5Q8WUX1 472 aa10.96□□□□□ -0.65
MSH5-216ENST00000484309 OIT3Q8WWZ8 545 aa10.96□□□□□ -0.65
MSH5-216ENST00000484309 MAL2Q969L2 176 aa10.96□□□□□ -0.65
MSH5-216ENST00000484309 WFIKKN1Q96NZ8 548 aa10.96□□□□□ -0.65
MSH5-216ENST00000484309 KLHL4Q9C0H6 718 aa10.96□□□□□ -0.65
MSH5-216ENST00000484309 OR11A1Q9GZK7 315 aa10.96□□□□□ -0.65
MSH5-216ENST00000484309 MTHFD2LQ9H903 347 aaPredicted RBP10.96□□□□□ -0.65
MSH5-216ENST00000484309 TIGARQ9NQ88 270 aa10.96□□□□□ -0.65
MSH5-216ENST00000484309 EXOSC3Q9NQT5 275 aaKnown RBP10.96□□□□□ -0.65
MSH5-216ENST00000484309 RLIMQ9NVW2 624 aa10.96□□□□□ -0.65
MSH5-216ENST00000484309 SLC25A37Q9NYZ2 338 aa10.96□□□□□ -0.65
MSH5-216ENST00000484309 F8P00451 2351 aa10.95□□□□□ -0.66
MSH5-216ENST00000484309 MED13LQ71F56 2210 aa10.95□□□□□ -0.66
MSH5-216ENST00000484309 DSPPQ9NZW4 1301 aa10.95□□□□□ -0.66
MSH5-216ENST00000484309 AKAP9Q99996 3911 aa10.95□□□□□ -0.66
MSH5-216ENST00000484309 A0A0G2JND7 137 aa10.95□□□□□ -0.66
MSH5-216ENST00000484309 FAM221AA4D161 298 aa10.95□□□□□ -0.66
MSH5-216ENST00000484309 SMAD9O15198 467 aaKnown RBP10.95□□□□□ -0.66
MSH5-216ENST00000484309 GKN3PP0CG01 181 aa10.95□□□□□ -0.66
MSH5-216ENST00000484309 NID1P14543 1247 aa10.95□□□□□ -0.66
MSH5-216ENST00000484309 DNAJA1P31689 397 aaKnown RBP10.95□□□□□ -0.66
MSH5-216ENST00000484309 UGT2B10P36537 528 aa10.95□□□□□ -0.66
MSH5-216ENST00000484309 ATP4BP51164 291 aa10.95□□□□□ -0.66
MSH5-216ENST00000484309 CRISP3P54108 245 aa10.95□□□□□ -0.66
MSH5-216ENST00000484309 DAZAP2Q15038 168 aaPredicted RBP10.95□□□□□ -0.66
MSH5-216ENST00000484309 RGNQ15493 299 aa10.95□□□□□ -0.66
MSH5-216ENST00000484309 SYT14P1Q58G82 188 aa10.95□□□□□ -0.66
MSH5-216ENST00000484309 TMEM201Q5SNT2 666 aa10.95□□□□□ -0.66
MSH5-216ENST00000484309 AP1ARQ63HQ0 302 aa10.95□□□□□ -0.66
MSH5-216ENST00000484309 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.95□□□□□ -0.66
MSH5-216ENST00000484309 NUFIP2Q7Z417 695 aaKnown RBP10.95□□□□□ -0.66
MSH5-216ENST00000484309 GRINAQ7Z429 371 aa10.95□□□□□ -0.66
MSH5-216ENST00000484309 C10orf111Q8N326 155 aa10.95□□□□□ -0.66
MSH5-216ENST00000484309 ZNF775Q96BV0 537 aaPredicted RBP10.95□□□□□ -0.66
MSH5-216ENST00000484309 SLC39A3Q9BRY0 314 aa10.95□□□□□ -0.66
MSH5-216ENST00000484309 MED18Q9BUE0 208 aa10.95□□□□□ -0.66
MSH5-216ENST00000484309 CCDC106Q9BWC9 280 aa10.95□□□□□ -0.66
MSH5-216ENST00000484309 SLC52A3Q9NQ40 469 aa10.95□□□□□ -0.66
MSH5-216ENST00000484309 SERINC1Q9NRX5 453 aa10.95□□□□□ -0.66
MSH5-216ENST00000484309 ELOVL5Q9NYP7 299 aa10.95□□□□□ -0.66
MSH5-216ENST00000484309 VAPAQ9P0L0 249 aa10.95□□□□□ -0.66
MSH5-216ENST00000484309 C6orf203Q9P0P8 240 aaPredicted RBP10.95□□□□□ -0.66
MSH5-216ENST00000484309 NDRG3Q9UGV2 375 aa10.95□□□□□ -0.66
MSH5-216ENST00000484309 ZNF443Q9Y2A4 671 aaPredicted RBP10.95□□□□□ -0.66
MSH5-216ENST00000484309 TESMINQ9Y4I5 508 aa10.95□□□□□ -0.66
MSH5-216ENST00000484309 TMED7-TICAM2A0A0A6YYA0 188 aa10.94□□□□□ -0.66
MSH5-216ENST00000484309 TMEM72A0PK05 275 aa10.94□□□□□ -0.66
MSH5-216ENST00000484309 TMEM247A6NEH6 219 aa10.94□□□□□ -0.66
MSH5-216ENST00000484309 C16orf97H3BN30 126 aa10.94□□□□□ -0.66
MSH5-216ENST00000484309 SULT2B1O00204 365 aa10.94□□□□□ -0.66
MSH5-216ENST00000484309 CASKO14936 926 aa10.94□□□□□ -0.66
MSH5-216ENST00000484309 FRS3O43559 492 aa10.94□□□□□ -0.66
MSH5-216ENST00000484309 PRKD3O94806 890 aa10.94□□□□□ -0.66
MSH5-216ENST00000484309 FESP07332 822 aa10.94□□□□□ -0.66
MSH5-216ENST00000484309 PABPC4LP0CB38 370 aaKnown RBP10.94□□□□□ -0.66
MSH5-216ENST00000484309 TACR3P29371 465 aa10.94□□□□□ -0.66
MSH5-216ENST00000484309 APOBEC1P41238 236 aaKnown RBP10.94□□□□□ -0.66
MSH5-216ENST00000484309 DIO1P49895 249 aa10.94□□□□□ -0.66
MSH5-216ENST00000484309 RAC3P60763 192 aa10.94□□□□□ -0.66
MSH5-216ENST00000484309 EPS8Q12929 822 aa10.94□□□□□ -0.66
MSH5-216ENST00000484309 GNA13Q14344 377 aa10.94□□□□□ -0.66
MSH5-216ENST00000484309 RNPS1Q15287 305 aaKnown RBP10.94□□□□□ -0.66
MSH5-216ENST00000484309 LIN52Q52LA3 116 aa10.94□□□□□ -0.66
MSH5-216ENST00000484309 LRIF1Q5T3J3 769 aa10.94□□□□□ -0.66
MSH5-216ENST00000484309 GTF2IRD2BQ6EKJ0 949 aa10.94□□□□□ -0.66
MSH5-216ENST00000484309 C22orf34Q6ZV56 151 aa10.94□□□□□ -0.66
MSH5-216ENST00000484309 GTF2IRD2Q86UP8 949 aa10.94□□□□□ -0.66
MSH5-216ENST00000484309 ADGRG3Q86Y34 549 aa10.94□□□□□ -0.66
MSH5-216ENST00000484309 CMIPQ8IY22 773 aa10.94□□□□□ -0.66
MSH5-216ENST00000484309 CLIP4Q8N3C7 705 aa10.94□□□□□ -0.66
MSH5-216ENST00000484309 NFKBIDQ8NI38 313 aa10.94□□□□□ -0.66
MSH5-216ENST00000484309 ARL5BQ96KC2 179 aa10.94□□□□□ -0.66
MSH5-216ENST00000484309 DACH2Q96NX9 599 aa10.94□□□□□ -0.66
MSH5-216ENST00000484309 ZNF300Q96RE9 604 aaPredicted RBP10.94□□□□□ -0.66
MSH5-216ENST00000484309 TMEM120AQ9BXJ8 343 aa10.94□□□□□ -0.66
MSH5-216ENST00000484309 RAD21L1Q9H4I0 556 aa10.94□□□□□ -0.66
MSH5-216ENST00000484309 IKZF5Q9H5V7 419 aa10.94□□□□□ -0.66
MSH5-216ENST00000484309 PLSCR4Q9NRQ2 329 aa10.94□□□□□ -0.66
MSH5-216ENST00000484309 GLRX2Q9NS18 164 aa10.94□□□□□ -0.66
MSH5-216ENST00000484309 CALML5Q9NZT1 146 aa10.94□□□□□ -0.66
MSH5-216ENST00000484309 KLHL13Q9P2N7 655 aa10.94□□□□□ -0.66
MSH5-216ENST00000484309 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.94□□□□□ -0.66
MSH5-216ENST00000484309 CHRNA9Q9UGM1 479 aa10.94□□□□□ -0.66
MSH5-216ENST00000484309 PLEKHA6Q9Y2H5 1048 aa10.94□□□□□ -0.66
MSH5-216ENST00000484309 TMED7Q9Y3B3 224 aa10.94□□□□□ -0.66
MSH5-216ENST00000484309 DSCAMO60469 2012 aa10.94□□□□□ -0.66
MSH5-216ENST00000484309 A0A1W2PPR1 153 aa10.93□□□□□ -0.66
MSH5-216ENST00000484309 CDHR4A6H8M9 788 aa10.93□□□□□ -0.66
MSH5-216ENST00000484309 CFAP73A6NFT4 308 aa10.93□□□□□ -0.66
MSH5-216ENST00000484309 C5orf58C9J3I9 102 aa10.93□□□□□ -0.66
MSH5-216ENST00000484309 SIAH2O43255 324 aa10.93□□□□□ -0.66
MSH5-216ENST00000484309 HRGP04196 525 aa10.93□□□□□ -0.66
MSH5-216ENST00000484309 PRG2P13727 222 aa10.93□□□□□ -0.66
MSH5-216ENST00000484309 MAGEA8P43361 318 aa10.93□□□□□ -0.66
MSH5-216ENST00000484309 IST1P53990 364 aa10.93□□□□□ -0.66
MSH5-216ENST00000484309 RASGEF1BQ0VAM2 473 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms