RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 MTRF1O75570 445 aaKnown RBP8.1□□□□□ -1.11
CDC42SE1-204ENST00000483763 REM1O75628 298 aa8.1□□□□□ -1.11
CDC42SE1-204ENST00000483763 HBQ1P09105 142 aa8.1□□□□□ -1.11
CDC42SE1-204ENST00000483763 ABCD3P28288 659 aa8.1□□□□□ -1.11
CDC42SE1-204ENST00000483763 RGS6P49758 472 aa8.1□□□□□ -1.11
CDC42SE1-204ENST00000483763 DUSP3P51452 185 aaPredicted RBP8.1□□□□□ -1.11
CDC42SE1-204ENST00000483763 CTBP2P56545 445 aa8.1□□□□□ -1.11
CDC42SE1-204ENST00000483763 SKP2Q13309 424 aa8.1□□□□□ -1.11
CDC42SE1-204ENST00000483763 FCRLBQ6BAA4 426 aa8.1□□□□□ -1.11
CDC42SE1-204ENST00000483763 FAM199XQ6PEV8 388 aaPredicted RBP8.1□□□□□ -1.11
CDC42SE1-204ENST00000483763 ULK3Q6PHR2 472 aa8.1□□□□□ -1.11
CDC42SE1-204ENST00000483763 SLCO6A1Q86UG4 719 aa8.1□□□□□ -1.11
CDC42SE1-204ENST00000483763 SLC34A3Q8N130 599 aa8.1□□□□□ -1.11
CDC42SE1-204ENST00000483763 BMPERQ8N8U9 685 aa8.1□□□□□ -1.11
CDC42SE1-204ENST00000483763 ZNF441Q8N8Z8 693 aa8.1□□□□□ -1.11
CDC42SE1-204ENST00000483763 OR2T33Q8NG76 320 aa8.1□□□□□ -1.11
CDC42SE1-204ENST00000483763 OR52I1Q8NGK6 324 aa8.1□□□□□ -1.11
CDC42SE1-204ENST00000483763 OR14A16Q8NHC5 309 aa8.1□□□□□ -1.11
CDC42SE1-204ENST00000483763 FANK1Q8TC84 345 aa8.1□□□□□ -1.11
CDC42SE1-204ENST00000483763 PHOSPHO1Q8TCT1 267 aa8.1□□□□□ -1.11
CDC42SE1-204ENST00000483763 BRIX1Q8TDN6 353 aaKnown RBP8.1□□□□□ -1.11
CDC42SE1-204ENST00000483763 THAP3Q8WTV1 239 aaPredicted RBP8.1□□□□□ -1.11
CDC42SE1-204ENST00000483763 FCGR1BQ92637 280 aa8.1□□□□□ -1.11
CDC42SE1-204ENST00000483763 C3orf49Q96BT1 292 aa8.1□□□□□ -1.11
CDC42SE1-204ENST00000483763 C8orf44Q96CB5 159 aa8.1□□□□□ -1.11
CDC42SE1-204ENST00000483763 LGALS12Q96DT0 336 aa8.1□□□□□ -1.11
CDC42SE1-204ENST00000483763 TMEM80Q96HE8 168 aa8.1□□□□□ -1.11
CDC42SE1-204ENST00000483763 LOXL4Q96JB6 756 aa8.1□□□□□ -1.11
CDC42SE1-204ENST00000483763 HS6ST2Q96MM7 605 aa8.1□□□□□ -1.11
CDC42SE1-204ENST00000483763 TNFRSF13CQ96RJ3 184 aa8.1□□□□□ -1.11
CDC42SE1-204ENST00000483763 TRIM2Q9C040 744 aa8.1□□□□□ -1.11
CDC42SE1-204ENST00000483763 HINT3Q9NQE9 182 aaKnown RBP8.1□□□□□ -1.11
CDC42SE1-204ENST00000483763 C14orf105Q9NVL8 296 aa8.1□□□□□ -1.11
CDC42SE1-204ENST00000483763 PCDHGA5Q9Y5G8 931 aa8.1□□□□□ -1.11
CDC42SE1-204ENST00000483763 NUP210LQ5VU65 1888 aa8.09□□□□□ -1.11
CDC42SE1-204ENST00000483763 PCNX3Q9H6A9 2034 aa8.09□□□□□ -1.11
CDC42SE1-204ENST00000483763 CHD8Q9HCK8 2581 aa8.09□□□□□ -1.11
CDC42SE1-204ENST00000483763 TEX51A0A1B0GUA7 166 aa8.09□□□□□ -1.11
CDC42SE1-204ENST00000483763 LNP1A1A4G5 178 aa8.09□□□□□ -1.11
CDC42SE1-204ENST00000483763 ZC3H12DA2A288 527 aaKnown RBP8.09□□□□□ -1.11
CDC42SE1-204ENST00000483763 EFCAB7A8K855 629 aa8.09□□□□□ -1.11
CDC42SE1-204ENST00000483763 NOL3O60936 208 aaKnown RBP8.09□□□□□ -1.11
CDC42SE1-204ENST00000483763 CSO75390 466 aaKnown RBP8.09□□□□□ -1.11
CDC42SE1-204ENST00000483763 HPGDP15428 266 aa8.09□□□□□ -1.11
CDC42SE1-204ENST00000483763 GADD45AP24522 165 aa8.09□□□□□ -1.11
CDC42SE1-204ENST00000483763 ETV5P41161 510 aa8.09□□□□□ -1.11
CDC42SE1-204ENST00000483763 ETV1P50549 477 aa8.09□□□□□ -1.11
CDC42SE1-204ENST00000483763 DCDP81605 110 aaKnown RBP8.09□□□□□ -1.11
CDC42SE1-204ENST00000483763 ZFP36L1Q07352 338 aaKnown RBP8.09□□□□□ -1.11
CDC42SE1-204ENST00000483763 CRYZQ08257 329 aaKnown RBP8.09□□□□□ -1.11
CDC42SE1-204ENST00000483763 NCF4Q15080 339 aa8.09□□□□□ -1.11
CDC42SE1-204ENST00000483763 SSX1Q16384 188 aa8.09□□□□□ -1.11
CDC42SE1-204ENST00000483763 GXYLT1Q4G148 440 aa8.09□□□□□ -1.11
CDC42SE1-204ENST00000483763 ZNF550Q7Z398 422 aa8.09□□□□□ -1.11
CDC42SE1-204ENST00000483763 SLC46A3Q7Z3Q1 461 aa8.09□□□□□ -1.11
CDC42SE1-204ENST00000483763 ANKRD37Q7Z713 158 aa8.09□□□□□ -1.11
CDC42SE1-204ENST00000483763 CMIPQ8IY22 773 aa8.09□□□□□ -1.11
CDC42SE1-204ENST00000483763 CLDN22Q8N7P3 220 aa8.09□□□□□ -1.11
CDC42SE1-204ENST00000483763 NFAM1Q8NET5 270 aaPredicted RBP8.09□□□□□ -1.11
CDC42SE1-204ENST00000483763 TBC1D15Q8TC07 691 aa8.09□□□□□ -1.11
CDC42SE1-204ENST00000483763 RHBDD1Q8TEB9 315 aa8.09□□□□□ -1.11
CDC42SE1-204ENST00000483763 SH3YL1Q96HL8 342 aaPredicted RBP8.09□□□□□ -1.11
CDC42SE1-204ENST00000483763 SLC38A2Q96QD8 506 aa8.09□□□□□ -1.11
CDC42SE1-204ENST00000483763 SPSB2Q99619 263 aa8.09□□□□□ -1.11
CDC42SE1-204ENST00000483763 MGLLQ99685 303 aa8.09□□□□□ -1.11
CDC42SE1-204ENST00000483763 WDR77Q9BQA1 342 aaPredicted RBP8.09□□□□□ -1.11
CDC42SE1-204ENST00000483763 OR51E2Q9H255 320 aa8.09□□□□□ -1.11
CDC42SE1-204ENST00000483763 MED20Q9H944 212 aa8.09□□□□□ -1.11
CDC42SE1-204ENST00000483763 PMF1-BGLAPU3KQ54 211 aa8.09□□□□□ -1.11
CDC42SE1-204ENST00000483763 IGKV1D-42A0A075B6H8 117 aa8.08□□□□□ -1.12
CDC42SE1-204ENST00000483763 A0A087WUJ7 227 aa8.08□□□□□ -1.12
CDC42SE1-204ENST00000483763 TMEM200CA6NKL6 621 aa8.08□□□□□ -1.12
CDC42SE1-204ENST00000483763 VSTM2BA6NLU5 285 aa8.08□□□□□ -1.12
CDC42SE1-204ENST00000483763 KDM4EB2RXH2 506 aaPredicted RBP8.08□□□□□ -1.12
CDC42SE1-204ENST00000483763 B4DXG7 233 aa8.08□□□□□ -1.12
CDC42SE1-204ENST00000483763 MEN1O00255 615 aa8.08□□□□□ -1.12
CDC42SE1-204ENST00000483763 PRODHO43272 600 aa8.08□□□□□ -1.12
CDC42SE1-204ENST00000483763 TSPAN2O60636 221 aa8.08□□□□□ -1.12
CDC42SE1-204ENST00000483763 BCL10O95999 233 aa8.08□□□□□ -1.12
CDC42SE1-204ENST00000483763 GNALP38405 381 aa8.08□□□□□ -1.12
CDC42SE1-204ENST00000483763 CD79BP40259 229 aa8.08□□□□□ -1.12
CDC42SE1-204ENST00000483763 ADH7P40394 386 aa8.08□□□□□ -1.12
CDC42SE1-204ENST00000483763 SOX3P41225 446 aa8.08□□□□□ -1.12
CDC42SE1-204ENST00000483763 ENTPD1P49961 510 aa8.08□□□□□ -1.12
CDC42SE1-204ENST00000483763 CCR4P51679 360 aa8.08□□□□□ -1.12
CDC42SE1-204ENST00000483763 LIMK1P53667 647 aa8.08□□□□□ -1.12
CDC42SE1-204ENST00000483763 PSMD4P55036 377 aaKnown RBP8.08□□□□□ -1.12
CDC42SE1-204ENST00000483763 RNF4P78317 190 aa8.08□□□□□ -1.12
CDC42SE1-204ENST00000483763 TOMM34Q15785 309 aaPredicted RBP8.08□□□□□ -1.12
CDC42SE1-204ENST00000483763 MEDAGQ5VYS4 303 aa8.08□□□□□ -1.12
CDC42SE1-204ENST00000483763 OVCH1Q7RTY7 1134 aa8.08□□□□□ -1.12
CDC42SE1-204ENST00000483763 OAFQ86UD1 273 aa8.08□□□□□ -1.12
CDC42SE1-204ENST00000483763 MARCH3Q86UD3 253 aa8.08□□□□□ -1.12
CDC42SE1-204ENST00000483763 ATCAYQ86WG3 371 aa8.08□□□□□ -1.12
CDC42SE1-204ENST00000483763 CPOQ8IVL8 374 aa8.08□□□□□ -1.12
CDC42SE1-204ENST00000483763 SLC7A5P1Q8MH63 180 aa8.08□□□□□ -1.12
CDC42SE1-204ENST00000483763 PTP4A1Q93096 173 aa8.08□□□□□ -1.12
CDC42SE1-204ENST00000483763 OMA1Q96E52 524 aa8.08□□□□□ -1.12
CDC42SE1-204ENST00000483763 OPALINQ96PE5 141 aa8.08□□□□□ -1.12
CDC42SE1-204ENST00000483763 ZBTB20Q9HC78 741 aaPredicted RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms