RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 SLC38A1Q9H2H9 487 aa8.64□□□□□ -1.03
TMEM39A-207ENST00000482162 WDR55Q9H6Y2 383 aaPredicted RBP8.64□□□□□ -1.03
TMEM39A-207ENST00000482162 FANCFQ9NPI8 374 aa8.64□□□□□ -1.03
TMEM39A-207ENST00000482162 SDR39U1Q9NRG7 319 aaPredicted RBP8.64□□□□□ -1.03
TMEM39A-207ENST00000482162 ZNF701Q9NV72 531 aaPredicted RBP8.64□□□□□ -1.03
TMEM39A-207ENST00000482162 LIPT1Q9Y234 373 aa8.64□□□□□ -1.03
TMEM39A-207ENST00000482162 SLC35A3Q9Y2D2 325 aa8.64□□□□□ -1.03
TMEM39A-207ENST00000482162 WDR45Q9Y484 360 aa8.64□□□□□ -1.03
TMEM39A-207ENST00000482162 A0A1W2PNR3 127 aa8.63□□□□□ -1.03
TMEM39A-207ENST00000482162 TRPC5OSA6NMA1 111 aa8.63□□□□□ -1.03
TMEM39A-207ENST00000482162 FAAHO00519 579 aa8.63□□□□□ -1.03
TMEM39A-207ENST00000482162 KLF11O14901 512 aa8.63□□□□□ -1.03
TMEM39A-207ENST00000482162 SMAD9O15198 467 aaKnown RBP8.63□□□□□ -1.03
TMEM39A-207ENST00000482162 CPSF4O95639 269 aaKnown RBP8.63□□□□□ -1.03
TMEM39A-207ENST00000482162 ZCCHC18P0CG32 403 aa8.63□□□□□ -1.03
TMEM39A-207ENST00000482162 PGCP20142 388 aa8.63□□□□□ -1.03
TMEM39A-207ENST00000482162 APOBEC1P41238 236 aaKnown RBP8.63□□□□□ -1.03
TMEM39A-207ENST00000482162 CDKN2CP42773 168 aa8.63□□□□□ -1.03
TMEM39A-207ENST00000482162 OR3A2P47893 321 aa8.63□□□□□ -1.03
TMEM39A-207ENST00000482162 CLK1P49759 484 aaKnown RBP8.63□□□□□ -1.03
TMEM39A-207ENST00000482162 NR1H2P55055 460 aa8.63□□□□□ -1.03
TMEM39A-207ENST00000482162 CASP9P55211 416 aa8.63□□□□□ -1.03
TMEM39A-207ENST00000482162 CHRNEQ04844 493 aa8.63□□□□□ -1.03
TMEM39A-207ENST00000482162 EXOC3L2Q2M3D2 409 aa8.63□□□□□ -1.03
TMEM39A-207ENST00000482162 TMEM201Q5SNT2 666 aa8.63□□□□□ -1.03
TMEM39A-207ENST00000482162 SFRP5Q5T4F7 317 aa8.63□□□□□ -1.03
TMEM39A-207ENST00000482162 HHATQ5VTY9 493 aa8.63□□□□□ -1.03
TMEM39A-207ENST00000482162 C3orf33Q6P1S2 294 aa8.63□□□□□ -1.03
TMEM39A-207ENST00000482162 TNFAIP8L2Q6P589 184 aaPredicted RBP8.63□□□□□ -1.03
TMEM39A-207ENST00000482162 LRRC74BQ6ZQY2 392 aa8.63□□□□□ -1.03
TMEM39A-207ENST00000482162 MAVSQ7Z434 540 aa8.63□□□□□ -1.03
TMEM39A-207ENST00000482162 MTDHQ86UE4 582 aaKnown RBP8.63□□□□□ -1.03
TMEM39A-207ENST00000482162 RNF130Q86XS8 419 aa8.63□□□□□ -1.03
TMEM39A-207ENST00000482162 ADGRG3Q86Y34 549 aa8.63□□□□□ -1.03
TMEM39A-207ENST00000482162 CMIPQ8IY22 773 aa8.63□□□□□ -1.03
TMEM39A-207ENST00000482162 SLC25A43Q8WUT9 341 aaPredicted RBP8.63□□□□□ -1.03
TMEM39A-207ENST00000482162 CNOT9Q92600 299 aaKnown RBP8.63□□□□□ -1.03
TMEM39A-207ENST00000482162 REXO5Q96IC2 774 aaKnown RBP8.63□□□□□ -1.03
TMEM39A-207ENST00000482162 OR52E6Q96RD3 313 aa8.63□□□□□ -1.03
TMEM39A-207ENST00000482162 SLC35A5Q9BS91 424 aa8.63□□□□□ -1.03
TMEM39A-207ENST00000482162 INPP5KQ9BT40 448 aa8.63□□□□□ -1.03
TMEM39A-207ENST00000482162 GSX2Q9BZM3 304 aa8.63□□□□□ -1.03
TMEM39A-207ENST00000482162 ACTR6Q9GZN1 396 aa8.63□□□□□ -1.03
TMEM39A-207ENST00000482162 MTHFD2LQ9H903 347 aaPredicted RBP8.63□□□□□ -1.03
TMEM39A-207ENST00000482162 SERINC1Q9NRX5 453 aa8.63□□□□□ -1.03
TMEM39A-207ENST00000482162 FAM53CQ9NYF3 392 aa8.63□□□□□ -1.03
TMEM39A-207ENST00000482162 KLHL9Q9P2J3 617 aa8.63□□□□□ -1.03
TMEM39A-207ENST00000482162 MARCOQ9UEW3 520 aaPredicted RBP8.63□□□□□ -1.03
TMEM39A-207ENST00000482162 CLDN24A6NM45 220 aa8.62□□□□□ -1.03
TMEM39A-207ENST00000482162 ARHGEF9O43307 516 aa8.62□□□□□ -1.03
TMEM39A-207ENST00000482162 DNPH1O43598 174 aa8.62□□□□□ -1.03
TMEM39A-207ENST00000482162 IL6P05231 212 aa8.62□□□□□ -1.03
TMEM39A-207ENST00000482162 CHRM4P08173 479 aa8.62□□□□□ -1.03
TMEM39A-207ENST00000482162 UBTFL6P0CB48 400 aaPredicted RBP8.62□□□□□ -1.03
TMEM39A-207ENST00000482162 IDO1P14902 403 aa8.62□□□□□ -1.03
TMEM39A-207ENST00000482162 COX5AP20674 150 aa8.62□□□□□ -1.03
TMEM39A-207ENST00000482162 EDNRAP25101 427 aa8.62□□□□□ -1.03
TMEM39A-207ENST00000482162 EPHA3P29320 983 aa8.62□□□□□ -1.03
TMEM39A-207ENST00000482162 SLC7A1P30825 629 aa8.62□□□□□ -1.03
TMEM39A-207ENST00000482162 NTF4P34130 210 aa8.62□□□□□ -1.03
TMEM39A-207ENST00000482162 MRPL19P49406 292 aaKnown RBP8.62□□□□□ -1.03
TMEM39A-207ENST00000482162 DIO1P49895 249 aa8.62□□□□□ -1.03
TMEM39A-207ENST00000482162 KHKP50053 298 aa8.62□□□□□ -1.03
TMEM39A-207ENST00000482162 MAP2K6P52564 334 aa8.62□□□□□ -1.03
TMEM39A-207ENST00000482162 SLC16A1P53985 500 aa8.62□□□□□ -1.03
TMEM39A-207ENST00000482162 MERTKQ12866 999 aa8.62□□□□□ -1.03
TMEM39A-207ENST00000482162 ITGADQ13349 1161 aa8.62□□□□□ -1.03
TMEM39A-207ENST00000482162 PDCD4Q53EL6 469 aaKnown RBP8.62□□□□□ -1.03
TMEM39A-207ENST00000482162 SYT14P1Q58G82 188 aa8.62□□□□□ -1.03
TMEM39A-207ENST00000482162 COX20Q5RI15 118 aa8.62□□□□□ -1.03
TMEM39A-207ENST00000482162 ABLIM2Q6H8Q1 611 aa8.62□□□□□ -1.03
TMEM39A-207ENST00000482162 Q6ZT83 130 aa8.62□□□□□ -1.03
TMEM39A-207ENST00000482162 GRINAQ7Z429 371 aa8.62□□□□□ -1.03
TMEM39A-207ENST00000482162 BIVMQ86UB2 503 aa8.62□□□□□ -1.03
TMEM39A-207ENST00000482162 TRIML2Q8N7C3 387 aa8.62□□□□□ -1.03
TMEM39A-207ENST00000482162 ZNF611Q8N823 705 aa8.62□□□□□ -1.03
TMEM39A-207ENST00000482162 ZNF614Q8N883 585 aa8.62□□□□□ -1.03
TMEM39A-207ENST00000482162 ANKFN1Q8N957 763 aa8.62□□□□□ -1.03
TMEM39A-207ENST00000482162 ANKRD42Q8N9B4 389 aa8.62□□□□□ -1.03
TMEM39A-207ENST00000482162 LILRB1Q8NHL6 650 aaPredicted RBP8.62□□□□□ -1.03
TMEM39A-207ENST00000482162 PIWIL2Q8TC59 973 aaKnown RBP8.62□□□□□ -1.03
TMEM39A-207ENST00000482162 HSD17B8Q92506 261 aa8.62□□□□□ -1.03
TMEM39A-207ENST00000482162 S100PBPQ96BU1 408 aa8.62□□□□□ -1.03
TMEM39A-207ENST00000482162 ZC3HAV1LQ96H79 300 aaKnown RBP8.62□□□□□ -1.03
TMEM39A-207ENST00000482162 C18orf12Q96KH6 178 aa8.62□□□□□ -1.03
TMEM39A-207ENST00000482162 PANX1Q96RD7 426 aa8.62□□□□□ -1.03
TMEM39A-207ENST00000482162 ADAM19Q9H013 955 aa8.62□□□□□ -1.03
TMEM39A-207ENST00000482162 GSX1Q9H4S2 264 aaPredicted RBP8.62□□□□□ -1.03
TMEM39A-207ENST00000482162 C12orf49Q9H741 205 aa8.62□□□□□ -1.03
TMEM39A-207ENST00000482162 MANSC1Q9H8J5 431 aa8.62□□□□□ -1.03
TMEM39A-207ENST00000482162 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.62□□□□□ -1.03
TMEM39A-207ENST00000482162 SLC6A13Q9NSD5 602 aa8.62□□□□□ -1.03
TMEM39A-207ENST00000482162 INTS9Q9NV88 658 aaKnown RBP8.62□□□□□ -1.03
TMEM39A-207ENST00000482162 ZIM2Q9NZV7 527 aa8.62□□□□□ -1.03
TMEM39A-207ENST00000482162 TRAPPC4Q9Y296 219 aa8.62□□□□□ -1.03
TMEM39A-207ENST00000482162 HDGFL3Q9Y3E1 203 aa8.62□□□□□ -1.03
TMEM39A-207ENST00000482162 TLN2Q9Y4G6 2542 aa8.62□□□□□ -1.03
TMEM39A-207ENST00000482162 FN1P02751 2386 aaKnown RBP8.62□□□□□ -1.03
TMEM39A-207ENST00000482162 NSD1Q96L73 2696 aaPredicted RBP8.61□□□□□ -1.03
TMEM39A-207ENST00000482162 DSPPQ9NZW4 1301 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms