RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 USP6P35125 1406 aa4.35□□□□□ -1.71
COPA-203ENST00000481040 IGHV4-30-2A0A087WSY4 118 aa4.34□□□□□ -1.71
COPA-203ENST00000481040 CCDC182A6NF36 153 aa4.34□□□□□ -1.71
COPA-203ENST00000481040 PP2D1A8MPX8 630 aa4.34□□□□□ -1.71
COPA-203ENST00000481040 FAM72CH0Y354 149 aa4.34□□□□□ -1.71
COPA-203ENST00000481040 PDHXO00330 501 aa4.34□□□□□ -1.71
COPA-203ENST00000481040 CLOCKO15516 846 aa4.34□□□□□ -1.71
COPA-203ENST00000481040 CXCL13O43927 109 aa4.34□□□□□ -1.71
COPA-203ENST00000481040 CRYGCP07315 174 aa4.34□□□□□ -1.71
COPA-203ENST00000481040 CCNB1P14635 433 aa4.34□□□□□ -1.71
COPA-203ENST00000481040 PRKACAP17612 351 aa4.34□□□□□ -1.71
COPA-203ENST00000481040 SERPINA2P20848 420 aa4.34□□□□□ -1.71
COPA-203ENST00000481040 TUBG1P23258 451 aa4.34□□□□□ -1.71
COPA-203ENST00000481040 IGFBP5P24593 272 aa4.34□□□□□ -1.71
COPA-203ENST00000481040 YWHABP31946 246 aaKnown RBP4.34□□□□□ -1.71
COPA-203ENST00000481040 SPRP35270 261 aaPredicted RBP4.34□□□□□ -1.71
COPA-203ENST00000481040 NUP62P37198 522 aaPredicted RBP4.34□□□□□ -1.71
COPA-203ENST00000481040 ETV5P41161 510 aa4.34□□□□□ -1.71
COPA-203ENST00000481040 CSRP3P50461 194 aa4.34□□□□□ -1.71
COPA-203ENST00000481040 RIDAP52758 137 aaKnown RBP4.34□□□□□ -1.71
COPA-203ENST00000481040 VLDLRP98155 873 aa4.34□□□□□ -1.71
COPA-203ENST00000481040 STK11Q15831 433 aa4.34□□□□□ -1.71
COPA-203ENST00000481040 MRPL23Q16540 153 aaKnown RBP4.34□□□□□ -1.71
COPA-203ENST00000481040 ISXQ2M1V0 245 aa4.34□□□□□ -1.71
COPA-203ENST00000481040 GLYR1Q49A26 553 aaPredicted RBP4.34□□□□□ -1.71
COPA-203ENST00000481040 NKAIN1Q4KMZ8 207 aa4.34□□□□□ -1.71
COPA-203ENST00000481040 C14orf28Q4W4Y0 310 aa4.34□□□□□ -1.71
COPA-203ENST00000481040 FBXO48Q5FWF7 155 aa4.34□□□□□ -1.71
COPA-203ENST00000481040 FAM72AQ5TYM5 149 aa4.34□□□□□ -1.71
COPA-203ENST00000481040 MEDAGQ5VYS4 303 aa4.34□□□□□ -1.71
COPA-203ENST00000481040 BSPRYQ5W0U4 402 aa4.34□□□□□ -1.71
COPA-203ENST00000481040 ZNF57Q68EA5 555 aaPredicted RBP4.34□□□□□ -1.71
COPA-203ENST00000481040 FAM72DQ6L9T8 149 aa4.34□□□□□ -1.71
COPA-203ENST00000481040 FAM199XQ6PEV8 388 aaPredicted RBP4.34□□□□□ -1.71
COPA-203ENST00000481040 LRRC31Q6UY01 552 aa4.34□□□□□ -1.71
COPA-203ENST00000481040 FAM72BQ86X60 149 aa4.34□□□□□ -1.71
COPA-203ENST00000481040 MICU2Q8IYU8 434 aa4.34□□□□□ -1.71
COPA-203ENST00000481040 MTURNQ8N3F0 131 aa4.34□□□□□ -1.71
COPA-203ENST00000481040 AQP11Q8NBQ7 271 aa4.34□□□□□ -1.71
COPA-203ENST00000481040 BEST4Q8NFU0 473 aa4.34□□□□□ -1.71
COPA-203ENST00000481040 OR4F6Q8NGB9 312 aa4.34□□□□□ -1.71
COPA-203ENST00000481040 OR13F1Q8NGS4 319 aa4.34□□□□□ -1.71
COPA-203ENST00000481040 OR8K3Q8NH51 312 aa4.34□□□□□ -1.71
COPA-203ENST00000481040 OR2T6Q8NHC8 308 aa4.34□□□□□ -1.71
COPA-203ENST00000481040 NRGNQ92686 78 aa4.34□□□□□ -1.71
COPA-203ENST00000481040 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.34□□□□□ -1.71
COPA-203ENST00000481040 PLEKHA8Q96JA3 519 aa4.34□□□□□ -1.71
COPA-203ENST00000481040 SYT15Q9BQS2 421 aa4.34□□□□□ -1.71
COPA-203ENST00000481040 NIPAL2Q9H841 368 aa4.34□□□□□ -1.71
COPA-203ENST00000481040 TUBG2Q9NRH3 451 aa4.34□□□□□ -1.71
COPA-203ENST00000481040 CUTCQ9NTM9 273 aa4.34□□□□□ -1.71
COPA-203ENST00000481040 TMEM181Q9P2C4 612 aa4.34□□□□□ -1.71
COPA-203ENST00000481040 KIF27Q86VH2 1401 aa4.34□□□□□ -1.71
COPA-203ENST00000481040 TMEM94Q12767 1356 aa4.33□□□□□ -1.72
COPA-203ENST00000481040 TRDCB7Z8K6 153 aa4.33□□□□□ -1.72
COPA-203ENST00000481040 TEX46H3BTG2 121 aa4.33□□□□□ -1.72
COPA-203ENST00000481040 NTN3O00634 580 aaPredicted RBP4.33□□□□□ -1.72
COPA-203ENST00000481040 OR10H3O60404 316 aa4.33□□□□□ -1.72
COPA-203ENST00000481040 SNAP91O60641 907 aa4.33□□□□□ -1.72
COPA-203ENST00000481040 OR2J3O76001 311 aa4.33□□□□□ -1.72
COPA-203ENST00000481040 NTN1O95631 604 aa4.33□□□□□ -1.72
COPA-203ENST00000481040 CSTAP01040 98 aa4.33□□□□□ -1.72
COPA-203ENST00000481040 MMP1P03956 469 aa4.33□□□□□ -1.72
COPA-203ENST00000481040 HCKP08631 526 aa4.33□□□□□ -1.72
COPA-203ENST00000481040 CT62P0C5K7 136 aa4.33□□□□□ -1.72
COPA-203ENST00000481040 ZSCAN5DPP0CG00 497 aa4.33□□□□□ -1.72
COPA-203ENST00000481040 RNH1P13489 461 aaKnown RBP4.33□□□□□ -1.72
COPA-203ENST00000481040 ZNF24P17028 368 aa4.33□□□□□ -1.72
COPA-203ENST00000481040 GSTM3P21266 225 aa4.33□□□□□ -1.72
COPA-203ENST00000481040 FGF9P31371 208 aaPredicted RBP4.33□□□□□ -1.72
COPA-203ENST00000481040 ACVR1BP36896 505 aa4.33□□□□□ -1.72
COPA-203ENST00000481040 OPRD1P41143 372 aa4.33□□□□□ -1.72
COPA-203ENST00000481040 XCR1P46094 333 aa4.33□□□□□ -1.72
COPA-203ENST00000481040 CD151P48509 253 aa4.33□□□□□ -1.72
COPA-203ENST00000481040 DAP3P51398 398 aaKnown RBP4.33□□□□□ -1.72
COPA-203ENST00000481040 HADHBP55084 474 aaKnown RBP4.33□□□□□ -1.72
COPA-203ENST00000481040 LIM2P55344 173 aa4.33□□□□□ -1.72
COPA-203ENST00000481040 TMEM50BP56557 158 aa4.33□□□□□ -1.72
COPA-203ENST00000481040 RIPK4P57078 832 aa4.33□□□□□ -1.72
COPA-203ENST00000481040 SLC8A3P57103 927 aa4.33□□□□□ -1.72
COPA-203ENST00000481040 KCNJ2P63252 427 aa4.33□□□□□ -1.72
COPA-203ENST00000481040 ACY1Q03154 408 aa4.33□□□□□ -1.72
COPA-203ENST00000481040 LIPEQ05469 1076 aa4.33□□□□□ -1.72
COPA-203ENST00000481040 PUDPQ08623 228 aa4.33□□□□□ -1.72
COPA-203ENST00000481040 PPIL2Q13356 520 aa4.33□□□□□ -1.72
COPA-203ENST00000481040 ILKQ13418 452 aa4.33□□□□□ -1.72
COPA-203ENST00000481040 MOGAT2Q3SYC2 334 aa4.33□□□□□ -1.72
COPA-203ENST00000481040 VPS26BQ4G0F5 336 aa4.33□□□□□ -1.72
COPA-203ENST00000481040 MFSD6LQ8IWD5 586 aa4.33□□□□□ -1.72
COPA-203ENST00000481040 GABRG1Q8N1C3 465 aa4.33□□□□□ -1.72
COPA-203ENST00000481040 FBXL16Q8N461 479 aa4.33□□□□□ -1.72
COPA-203ENST00000481040 PQLC3Q8N755 202 aa4.33□□□□□ -1.72
COPA-203ENST00000481040 OR4K14Q8NGD5 310 aa4.33□□□□□ -1.72
COPA-203ENST00000481040 OR52H1Q8NGJ2 320 aa4.33□□□□□ -1.72
COPA-203ENST00000481040 FLVCR1-AS1Q8TAF5 88 aa4.33□□□□□ -1.72
COPA-203ENST00000481040 GPX8Q8TED1 209 aa4.33□□□□□ -1.72
COPA-203ENST00000481040 ARNTL2Q8WYA1 636 aa4.33□□□□□ -1.72
COPA-203ENST00000481040 MRPS31Q92665 395 aaKnown RBP4.33□□□□□ -1.72
COPA-203ENST00000481040 TAF15Q92804 592 aaKnown RBP eCLIP4.33□□□□□ -1.72
COPA-203ENST00000481040 LRRC39Q96DD0 335 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms