RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 PCDHGB4Q9UN71 923 aa12.79□□□□□ -0.36
ATG4B-218ENST00000479554 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.78□□□□□ -0.36
ATG4B-218ENST00000479554 SERINC4A6NH21 518 aa12.78□□□□□ -0.36
ATG4B-218ENST00000479554 EFNA2O43921 213 aa12.78□□□□□ -0.36
ATG4B-218ENST00000479554 EIF4E2O60573 245 aaKnown RBP12.78□□□□□ -0.36
ATG4B-218ENST00000479554 STX11O75558 287 aa12.78□□□□□ -0.36
ATG4B-218ENST00000479554 SLC7A1P30825 629 aa12.78□□□□□ -0.36
ATG4B-218ENST00000479554 MXRA7P84157 204 aa12.78□□□□□ -0.36
ATG4B-218ENST00000479554 CYLC2Q14093 348 aaPredicted RBP12.78□□□□□ -0.36
ATG4B-218ENST00000479554 QPRTQ15274 297 aa12.78□□□□□ -0.36
ATG4B-218ENST00000479554 GPR68Q15743 365 aa12.78□□□□□ -0.36
ATG4B-218ENST00000479554 GSTA3Q16772 222 aa12.78□□□□□ -0.36
ATG4B-218ENST00000479554 TMEM176BQ3YBM2 270 aaPredicted RBP12.78□□□□□ -0.36
ATG4B-218ENST00000479554 DNAL1Q4LDG9 190 aa12.78□□□□□ -0.36
ATG4B-218ENST00000479554 Q5PR19 223 aa12.78□□□□□ -0.36
ATG4B-218ENST00000479554 LRRC75A-AS1Q8N1F1 130 aa12.78□□□□□ -0.36
ATG4B-218ENST00000479554 CLEC4FQ8N1N0 589 aa12.78□□□□□ -0.36
ATG4B-218ENST00000479554 ARHGAP24Q8N264 748 aa12.78□□□□□ -0.36
ATG4B-218ENST00000479554 POU5F2Q8N7G0 328 aa12.78□□□□□ -0.36
ATG4B-218ENST00000479554 OR8J2Q8NGG1 315 aa12.78□□□□□ -0.36
ATG4B-218ENST00000479554 POM121Q96HA1 1249 aa12.78□□□□□ -0.36
ATG4B-218ENST00000479554 ACTR6Q9GZN1 396 aa12.78□□□□□ -0.36
ATG4B-218ENST00000479554 OR10A4Q9H209 315 aa12.78□□□□□ -0.36
ATG4B-218ENST00000479554 GSX1Q9H4S2 264 aaPredicted RBP12.78□□□□□ -0.36
ATG4B-218ENST00000479554 COQ10BQ9H8M1 238 aa12.78□□□□□ -0.36
ATG4B-218ENST00000479554 EXD2Q9NVH0 621 aa12.78□□□□□ -0.36
ATG4B-218ENST00000479554 TAS2R1Q9NYW7 299 aa12.78□□□□□ -0.36
ATG4B-218ENST00000479554 KLHL13Q9P2N7 655 aa12.78□□□□□ -0.36
ATG4B-218ENST00000479554 GPR52Q9Y2T5 361 aa12.78□□□□□ -0.36
ATG4B-218ENST00000479554 GSC2O15499 205 aa12.77□□□□□ -0.37
ATG4B-218ENST00000479554 CYP7B1O75881 506 aa12.77□□□□□ -0.37
ATG4B-218ENST00000479554 NTN1O95631 604 aa12.77□□□□□ -0.37
ATG4B-218ENST00000479554 AGR2O95994 175 aa12.77□□□□□ -0.37
ATG4B-218ENST00000479554 NID1P14543 1247 aa12.77□□□□□ -0.37
ATG4B-218ENST00000479554 IDO1P14902 403 aa12.77□□□□□ -0.37
ATG4B-218ENST00000479554 PSMB1P20618 241 aaKnown RBP12.77□□□□□ -0.37
ATG4B-218ENST00000479554 MRPL19P49406 292 aaKnown RBP12.77□□□□□ -0.37
ATG4B-218ENST00000479554 SKP2Q13309 424 aa12.77□□□□□ -0.37
ATG4B-218ENST00000479554 ZNF141Q15928 474 aa12.77□□□□□ -0.37
ATG4B-218ENST00000479554 ARHGAP11BQ3KRB8 267 aa12.77□□□□□ -0.37
ATG4B-218ENST00000479554 SLC25A53Q5H9E4 307 aa12.77□□□□□ -0.37
ATG4B-218ENST00000479554 ATAD3BQ5T9A4 648 aa12.77□□□□□ -0.37
ATG4B-218ENST00000479554 ANXA8L1Q5VT79 327 aa12.77□□□□□ -0.37
ATG4B-218ENST00000479554 C3orf33Q6P1S2 294 aa12.77□□□□□ -0.37
ATG4B-218ENST00000479554 FCRLAQ7L513 359 aa12.77□□□□□ -0.37
ATG4B-218ENST00000479554 BIVMQ86UB2 503 aa12.77□□□□□ -0.37
ATG4B-218ENST00000479554 ANKRD46Q86W74 232 aa12.77□□□□□ -0.37
ATG4B-218ENST00000479554 SNX32Q86XE0 403 aa12.77□□□□□ -0.37
ATG4B-218ENST00000479554 WFDC8Q8IUA0 241 aa12.77□□□□□ -0.37
ATG4B-218ENST00000479554 RBM15BQ8NDT2 890 aaKnown RBP12.77□□□□□ -0.37
ATG4B-218ENST00000479554 VPS37AQ8NEZ2 397 aa12.77□□□□□ -0.37
ATG4B-218ENST00000479554 ARSGQ96EG1 525 aa12.77□□□□□ -0.37
ATG4B-218ENST00000479554 C18orf12Q96KH6 178 aa12.77□□□□□ -0.37
ATG4B-218ENST00000479554 ZNF350Q9GZX5 532 aa12.77□□□□□ -0.37
ATG4B-218ENST00000479554 LAT2Q9GZY6 243 aa12.77□□□□□ -0.37
ATG4B-218ENST00000479554 OR51I1Q9H343 314 aa12.77□□□□□ -0.37
ATG4B-218ENST00000479554 GP6Q9HCN6 339 aa12.77□□□□□ -0.37
ATG4B-218ENST00000479554 MKLN1Q9UL63 735 aa12.77□□□□□ -0.37
ATG4B-218ENST00000479554 CENPVL1A0A0U1RR11 272 aa12.76□□□□□ -0.37
ATG4B-218ENST00000479554 LOC100653049A0A140TA62 436 aa12.76□□□□□ -0.37
ATG4B-218ENST00000479554 PRSS51A0A1B0GVH4 220 aa12.76□□□□□ -0.37
ATG4B-218ENST00000479554 A0A1W2PNR3 127 aa12.76□□□□□ -0.37
ATG4B-218ENST00000479554 ETV2O00321 342 aaPredicted RBP12.76□□□□□ -0.37
ATG4B-218ENST00000479554 KLF4O43474 513 aa12.76□□□□□ -0.37
ATG4B-218ENST00000479554 FCMRO60667 390 aa12.76□□□□□ -0.37
ATG4B-218ENST00000479554 KRT34O76011 436 aa12.76□□□□□ -0.37
ATG4B-218ENST00000479554 PRKD3O94806 890 aa12.76□□□□□ -0.37
ATG4B-218ENST00000479554 CPSF4O95639 269 aaKnown RBP12.76□□□□□ -0.37
ATG4B-218ENST00000479554 CSTAP01040 98 aa12.76□□□□□ -0.37
ATG4B-218ENST00000479554 ALDOCP09972 364 aaKnown RBP12.76□□□□□ -0.37
ATG4B-218ENST00000479554 UQCRC2P22695 453 aa12.76□□□□□ -0.37
ATG4B-218ENST00000479554 CLNS1AP54105 237 aaKnown RBP12.76□□□□□ -0.37
ATG4B-218ENST00000479554 NR1H2P55055 460 aa12.76□□□□□ -0.37
ATG4B-218ENST00000479554 CASP9P55211 416 aa12.76□□□□□ -0.37
ATG4B-218ENST00000479554 DPY19L1Q2PZI1 675 aa12.76□□□□□ -0.37
ATG4B-218ENST00000479554 KRTAP21-3Q3LHN1 58 aa12.76□□□□□ -0.37
ATG4B-218ENST00000479554 TNFAIP8L2Q6P589 184 aaPredicted RBP12.76□□□□□ -0.37
ATG4B-218ENST00000479554 TFAP2EQ6VUC0 442 aa12.76□□□□□ -0.37
ATG4B-218ENST00000479554 ZNF704Q6ZNC4 412 aaPredicted RBP12.76□□□□□ -0.37
ATG4B-218ENST00000479554 EIF3MQ7L2H7 374 aaKnown RBP12.76□□□□□ -0.37
ATG4B-218ENST00000479554 OLIG3Q7RTU3 272 aa12.76□□□□□ -0.37
ATG4B-218ENST00000479554 NUFIP2Q7Z417 695 aaKnown RBP12.76□□□□□ -0.37
ATG4B-218ENST00000479554 TUSC5Q8IXB3 177 aa12.76□□□□□ -0.37
ATG4B-218ENST00000479554 MIER2Q8N344 545 aa12.76□□□□□ -0.37
ATG4B-218ENST00000479554 SLC43A2Q8N370 569 aa12.76□□□□□ -0.37
ATG4B-218ENST00000479554 STEAP2Q8NFT2 490 aa12.76□□□□□ -0.37
ATG4B-218ENST00000479554 MIPOL1Q8TD10 442 aa12.76□□□□□ -0.37
ATG4B-218ENST00000479554 MCUR1Q96AQ8 359 aa12.76□□□□□ -0.37
ATG4B-218ENST00000479554 TESCQ96BS2 214 aa12.76□□□□□ -0.37
ATG4B-218ENST00000479554 ZNF524Q96C55 264 aa12.76□□□□□ -0.37
ATG4B-218ENST00000479554 TACO1Q9BSH4 297 aaKnown RBP12.76□□□□□ -0.37
ATG4B-218ENST00000479554 THUMPD3Q9BV44 507 aaKnown RBP12.76□□□□□ -0.37
ATG4B-218ENST00000479554 CADM1Q9BY67 442 aaKnown RBP12.76□□□□□ -0.37
ATG4B-218ENST00000479554 MMADHCQ9H3L0 296 aaPredicted RBP12.76□□□□□ -0.37
ATG4B-218ENST00000479554 TMEM45AQ9NWC5 275 aa12.76□□□□□ -0.37
ATG4B-218ENST00000479554 KLHL9Q9P2J3 617 aa12.76□□□□□ -0.37
ATG4B-218ENST00000479554 KCNE5Q9UJ90 142 aa12.76□□□□□ -0.37
ATG4B-218ENST00000479554 NUP214P35658 2090 aaPredicted RBP12.76□□□□□ -0.37
ATG4B-218ENST00000479554 IGHV3-15A0A0B4J1V0 119 aa12.75□□□□□ -0.37
ATG4B-218ENST00000479554 KIAA0513O60268 411 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms