RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 ZNF559Q9BR84 538 aa9.97□□□□□ -0.81
VPS52-217ENST00000478934 MED17Q9NVC6 651 aa9.97□□□□□ -0.81
VPS52-217ENST00000478934 ZNF346Q9UL40 294 aaKnown RBP9.97□□□□□ -0.81
VPS52-217ENST00000478934 ADAM18Q9Y3Q7 739 aa9.97□□□□□ -0.81
VPS52-217ENST00000478934 A0A087WV48 116 aa9.97□□□□□ -0.81
VPS52-217ENST00000478934 PRR23D1E9PI22 279 aaPredicted RBP9.97□□□□□ -0.81
VPS52-217ENST00000478934 ERVH48-1M5A8F1 160 aa9.97□□□□□ -0.81
VPS52-217ENST00000478934 CHST10O43529 356 aa9.97□□□□□ -0.81
VPS52-217ENST00000478934 AGR2O95994 175 aa9.97□□□□□ -0.81
VPS52-217ENST00000478934 PRR23D2P0DMB1 279 aaPredicted RBP9.97□□□□□ -0.81
VPS52-217ENST00000478934 ARSBP15848 533 aa9.97□□□□□ -0.81
VPS52-217ENST00000478934 GABRG2P18507 467 aa9.97□□□□□ -0.81
VPS52-217ENST00000478934 HTR2BP41595 481 aa9.97□□□□□ -0.81
VPS52-217ENST00000478934 MLLT3P42568 568 aaPredicted RBP9.97□□□□□ -0.81
VPS52-217ENST00000478934 ZNF85Q03923 595 aa9.97□□□□□ -0.81
VPS52-217ENST00000478934 ILF3Q12906 894 aaKnown RBP eCLIP9.97□□□□□ -0.81
VPS52-217ENST00000478934 BTBD16Q32M84 506 aa9.97□□□□□ -0.81
VPS52-217ENST00000478934 TP53I3Q53FA7 332 aa9.97□□□□□ -0.81
VPS52-217ENST00000478934 EIPR1Q53HC9 387 aa9.97□□□□□ -0.81
VPS52-217ENST00000478934 EXOSC6Q5RKV6 272 aaKnown RBP9.97□□□□□ -0.81
VPS52-217ENST00000478934 BCL2L15Q5TBC7 163 aa9.97□□□□□ -0.81
VPS52-217ENST00000478934 GPR135Q8IZ08 494 aa9.97□□□□□ -0.81
VPS52-217ENST00000478934 FAM160A2Q8N612 972 aaPredicted RBP9.97□□□□□ -0.81
VPS52-217ENST00000478934 SDR9C7Q8NEX9 313 aa9.97□□□□□ -0.81
VPS52-217ENST00000478934 OR4K13Q8NH42 304 aa9.97□□□□□ -0.81
VPS52-217ENST00000478934 NR4A3Q92570 626 aa9.97□□□□□ -0.81
VPS52-217ENST00000478934 BEX1Q9HBH7 125 aa9.97□□□□□ -0.81
VPS52-217ENST00000478934 TRPV5Q9NQA5 729 aa9.97□□□□□ -0.81
VPS52-217ENST00000478934 ENAMQ9NRM1 1142 aa9.97□□□□□ -0.81
VPS52-217ENST00000478934 MED31Q9Y3C7 131 aa9.97□□□□□ -0.81
VPS52-217ENST00000478934 FAM171A2A8MVW0 826 aa9.96□□□□□ -0.81
VPS52-217ENST00000478934 PSMD9O00233 223 aa9.96□□□□□ -0.81
VPS52-217ENST00000478934 SEC14L5O43304 696 aa9.96□□□□□ -0.81
VPS52-217ENST00000478934 OR10H2O60403 315 aa9.96□□□□□ -0.81
VPS52-217ENST00000478934 PTP4A3O75365 173 aa9.96□□□□□ -0.81
VPS52-217ENST00000478934 SERPINI2O75830 405 aa9.96□□□□□ -0.81
VPS52-217ENST00000478934 RGS9O75916 674 aaPredicted RBP9.96□□□□□ -0.81
VPS52-217ENST00000478934 S1PR1P21453 382 aa9.96□□□□□ -0.81
VPS52-217ENST00000478934 BMP8BP34820 402 aa9.96□□□□□ -0.81
VPS52-217ENST00000478934 NAA10P41227 235 aaPredicted RBP9.96□□□□□ -0.81
VPS52-217ENST00000478934 MAP3K8P41279 467 aa9.96□□□□□ -0.81
VPS52-217ENST00000478934 ACAA2P42765 397 aaKnown RBP9.96□□□□□ -0.81
VPS52-217ENST00000478934 MAGEB1P43366 347 aa9.96□□□□□ -0.81
VPS52-217ENST00000478934 CRYZQ08257 329 aaKnown RBP9.96□□□□□ -0.81
VPS52-217ENST00000478934 FAPQ12884 760 aa9.96□□□□□ -0.81
VPS52-217ENST00000478934 GPR176Q14439 515 aa9.96□□□□□ -0.81
VPS52-217ENST00000478934 CCDC58Q4VC31 144 aa9.96□□□□□ -0.81
VPS52-217ENST00000478934 YIF1BQ5BJH7 314 aa9.96□□□□□ -0.81
VPS52-217ENST00000478934 GARNL3Q5VVW2 1013 aa9.96□□□□□ -0.81
VPS52-217ENST00000478934 BMP8AQ7Z5Y6 402 aa9.96□□□□□ -0.81
VPS52-217ENST00000478934 CEACAM19Q7Z692 300 aa9.96□□□□□ -0.81
VPS52-217ENST00000478934 TAF8Q7Z7C8 310 aa9.96□□□□□ -0.81
VPS52-217ENST00000478934 OAFQ86UD1 273 aa9.96□□□□□ -0.81
VPS52-217ENST00000478934 TIGD4Q8IY51 512 aa9.96□□□□□ -0.81
VPS52-217ENST00000478934 IZUMO1Q8IYV9 350 aa9.96□□□□□ -0.81
VPS52-217ENST00000478934 GATSQ8NAP1 163 aa9.96□□□□□ -0.81
VPS52-217ENST00000478934 OR4D9Q8NGE8 314 aa9.96□□□□□ -0.81
VPS52-217ENST00000478934 ZPLD1Q8TCW7 415 aa9.96□□□□□ -0.81
VPS52-217ENST00000478934 SMPDL3BQ92485 455 aa9.96□□□□□ -0.81
VPS52-217ENST00000478934 RELTQ969Z4 430 aa9.96□□□□□ -0.81
VPS52-217ENST00000478934 CCDC3Q9BQI4 270 aa9.96□□□□□ -0.81
VPS52-217ENST00000478934 ORAI3Q9BRQ5 295 aa9.96□□□□□ -0.81
VPS52-217ENST00000478934 ADGRL4Q9HBW9 690 aa9.96□□□□□ -0.81
VPS52-217ENST00000478934 MCCC2Q9HCC0 563 aa9.96□□□□□ -0.81
VPS52-217ENST00000478934 DUSP22Q9NRW4 184 aa9.96□□□□□ -0.81
VPS52-217ENST00000478934 LRIT1Q9P2V4 623 aa9.96□□□□□ -0.81
VPS52-217ENST00000478934 URADA6NGE7 173 aa9.96□□□□□ -0.82
VPS52-217ENST00000478934 C2orf74A8MZ97 194 aa9.96□□□□□ -0.82
VPS52-217ENST00000478934 PYCR1P32322 319 aa9.96□□□□□ -0.82
VPS52-217ENST00000478934 EIF2B5Q13144 721 aaKnown RBP9.96□□□□□ -0.82
VPS52-217ENST00000478934 MZT2BQ6NZ67 158 aa9.96□□□□□ -0.82
VPS52-217ENST00000478934 OR52E2Q8NGJ4 325 aa9.96□□□□□ -0.82
VPS52-217ENST00000478934 OR5M3Q8NGP4 307 aa9.96□□□□□ -0.82
VPS52-217ENST00000478934 OR5H6Q8NGV6 325 aa9.96□□□□□ -0.82
VPS52-217ENST00000478934 RLN3Q8WXF3 142 aa9.96□□□□□ -0.82
VPS52-217ENST00000478934 GCDHQ92947 438 aaPredicted RBP9.96□□□□□ -0.82
VPS52-217ENST00000478934 PHF21AQ96BD5 680 aa9.96□□□□□ -0.82
VPS52-217ENST00000478934 CTHRC1Q96CG8 243 aa9.96□□□□□ -0.82
VPS52-217ENST00000478934 ABHD1Q96SE0 405 aa9.96□□□□□ -0.82
VPS52-217ENST00000478934 SLC28A3Q9HAS3 691 aa9.96□□□□□ -0.82
VPS52-217ENST00000478934 LYRM4Q9HD34 91 aa9.96□□□□□ -0.82
VPS52-217ENST00000478934 CMC2Q9NRP2 79 aa9.96□□□□□ -0.82
VPS52-217ENST00000478934 HSPB11Q9Y547 144 aa9.96□□□□□ -0.82
VPS52-217ENST00000478934 EML5Q05BV3 1969 aa9.95□□□□□ -0.82
VPS52-217ENST00000478934 A0A0B4J2E0 115 aa9.95□□□□□ -0.82
VPS52-217ENST00000478934 A0A1B0GX12 115 aa9.95□□□□□ -0.82
VPS52-217ENST00000478934 B4DGG1 531 aa9.95□□□□□ -0.82
VPS52-217ENST00000478934 INMT-MINDY4F8WBC2 141 aa9.95□□□□□ -0.82
VPS52-217ENST00000478934 HCN1O60741 890 aa9.95□□□□□ -0.82
VPS52-217ENST00000478934 TFP02787 698 aa9.95□□□□□ -0.82
VPS52-217ENST00000478934 IGHV4-34P06331 123 aa9.95□□□□□ -0.82
VPS52-217ENST00000478934 CD3GP09693 182 aa9.95□□□□□ -0.82
VPS52-217ENST00000478934 SBK2P0C263 348 aa9.95□□□□□ -0.82
VPS52-217ENST00000478934 PEPDP12955 493 aa9.95□□□□□ -0.82
VPS52-217ENST00000478934 MAOAP21397 527 aa9.95□□□□□ -0.82
VPS52-217ENST00000478934 PGDP52209 483 aa9.95□□□□□ -0.82
VPS52-217ENST00000478934 ACSM1Q08AH1 577 aa9.95□□□□□ -0.82
VPS52-217ENST00000478934 HTR4Q13639 388 aa9.95□□□□□ -0.82
VPS52-217ENST00000478934 GALEQ14376 348 aa9.95□□□□□ -0.82
VPS52-217ENST00000478934 FAAH2Q6GMR7 532 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms