RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 DIO1P49895 249 aa11.77□□□□□ -0.53
RTFDC1-207ENST00000477573 RBX1P62877 108 aa11.77□□□□□ -0.53
RTFDC1-207ENST00000477573 TAP2Q03519 686 aa11.77□□□□□ -0.53
RTFDC1-207ENST00000477573 GAMTQ14353 236 aa11.77□□□□□ -0.53
RTFDC1-207ENST00000477573 RSU1Q15404 277 aa11.77□□□□□ -0.53
RTFDC1-207ENST00000477573 SLC36A2Q495M3 483 aa11.77□□□□□ -0.53
RTFDC1-207ENST00000477573 C9orf64Q5T6V5 341 aa11.77□□□□□ -0.53
RTFDC1-207ENST00000477573 LYPD4Q6UWN0 246 aa11.77□□□□□ -0.53
RTFDC1-207ENST00000477573 QSOX2Q6ZRP7 698 aa11.77□□□□□ -0.53
RTFDC1-207ENST00000477573 GID4Q8IVV7 300 aa11.77□□□□□ -0.53
RTFDC1-207ENST00000477573 RYBPQ8N488 228 aaPredicted RBP11.77□□□□□ -0.53
RTFDC1-207ENST00000477573 OR2AP1Q8NGE2 309 aa11.77□□□□□ -0.53
RTFDC1-207ENST00000477573 OR9A1PQ8NGU1 263 aa11.77□□□□□ -0.53
RTFDC1-207ENST00000477573 FOXRED1Q96CU9 486 aaPredicted RBP11.77□□□□□ -0.53
RTFDC1-207ENST00000477573 OTUB2Q96DC9 234 aa11.77□□□□□ -0.53
RTFDC1-207ENST00000477573 C14orf79Q96F83 325 aa11.77□□□□□ -0.53
RTFDC1-207ENST00000477573 CNTNAP3BQ96NU0 1288 aa11.77□□□□□ -0.53
RTFDC1-207ENST00000477573 MAPKAP1Q9BPZ7 522 aa11.77□□□□□ -0.53
RTFDC1-207ENST00000477573 CHIAQ9BZP6 476 aa11.77□□□□□ -0.53
RTFDC1-207ENST00000477573 FAM117AQ9C073 453 aa11.77□□□□□ -0.53
RTFDC1-207ENST00000477573 HEBP1Q9NRV9 189 aa11.77□□□□□ -0.53
RTFDC1-207ENST00000477573 C1GALT1Q9NS00 363 aa11.77□□□□□ -0.53
RTFDC1-207ENST00000477573 ACSS1Q9NUB1 689 aaPredicted RBP11.77□□□□□ -0.53
RTFDC1-207ENST00000477573 GDF2Q9UK05 429 aaPredicted RBP11.77□□□□□ -0.53
RTFDC1-207ENST00000477573 CCL26Q9Y258 94 aa11.77□□□□□ -0.53
RTFDC1-207ENST00000477573 SLC35A3Q9Y2D2 325 aa11.77□□□□□ -0.53
RTFDC1-207ENST00000477573 LAMA2P24043 3122 aaKnown RBP11.77□□□□□ -0.53
RTFDC1-207ENST00000477573 TSPAN2O60636 221 aa11.77□□□□□ -0.53
RTFDC1-207ENST00000477573 KERAO60938 352 aa11.77□□□□□ -0.53
RTFDC1-207ENST00000477573 ZNF35P13682 527 aa11.77□□□□□ -0.53
RTFDC1-207ENST00000477573 PRPS1L1P21108 318 aa11.77□□□□□ -0.53
RTFDC1-207ENST00000477573 GDNFP39905 211 aa11.77□□□□□ -0.53
RTFDC1-207ENST00000477573 MNDAP41218 407 aa11.77□□□□□ -0.53
RTFDC1-207ENST00000477573 FOXK1P85037 733 aa11.77□□□□□ -0.53
RTFDC1-207ENST00000477573 ZSWIM7Q19AV6 140 aa11.77□□□□□ -0.53
RTFDC1-207ENST00000477573 LPCAT3Q6P1A2 487 aa11.77□□□□□ -0.53
RTFDC1-207ENST00000477573 RANBP3LQ86VV4 465 aaPredicted RBP11.77□□□□□ -0.53
RTFDC1-207ENST00000477573 TOMM5Q8N4H5 51 aa11.77□□□□□ -0.53
RTFDC1-207ENST00000477573 HDDC3Q8N4P3 179 aa11.77□□□□□ -0.53
RTFDC1-207ENST00000477573 OR5M3Q8NGP4 307 aa11.77□□□□□ -0.53
RTFDC1-207ENST00000477573 PIH1D2Q8WWB5 315 aa11.77□□□□□ -0.53
RTFDC1-207ENST00000477573 IRF7Q92985 503 aa11.77□□□□□ -0.53
RTFDC1-207ENST00000477573 TMED9Q9BVK6 235 aa11.77□□□□□ -0.53
RTFDC1-207ENST00000477573 FZD3Q9NPG1 666 aa11.77□□□□□ -0.53
RTFDC1-207ENST00000477573 IL17CQ9P0M4 197 aa11.77□□□□□ -0.53
RTFDC1-207ENST00000477573 CLEC4EQ9ULY5 219 aa11.77□□□□□ -0.53
RTFDC1-207ENST00000477573 MOKQ9UQ07 419 aa11.77□□□□□ -0.53
RTFDC1-207ENST00000477573 HS3ST2Q9Y278 367 aa11.77□□□□□ -0.53
RTFDC1-207ENST00000477573 A0A0U1RQV5 110 aa11.76□□□□□ -0.53
RTFDC1-207ENST00000477573 POU2F2P09086 479 aa11.76□□□□□ -0.53
RTFDC1-207ENST00000477573 MC3RP41968 323 aa11.76□□□□□ -0.53
RTFDC1-207ENST00000477573 PTGER3P43115 390 aa11.76□□□□□ -0.53
RTFDC1-207ENST00000477573 PITPNBP48739 271 aa11.76□□□□□ -0.53
RTFDC1-207ENST00000477573 SLC26A5P58743 744 aa11.76□□□□□ -0.53
RTFDC1-207ENST00000477573 CACNG1Q06432 222 aa11.76□□□□□ -0.53
RTFDC1-207ENST00000477573 NKAPLQ5M9Q1 402 aa11.76□□□□□ -0.53
RTFDC1-207ENST00000477573 ZNF613Q6PF04 617 aa11.76□□□□□ -0.53
RTFDC1-207ENST00000477573 CERS6Q6ZMG9 384 aa11.76□□□□□ -0.53
RTFDC1-207ENST00000477573 ABHD13Q7L211 337 aa11.76□□□□□ -0.53
RTFDC1-207ENST00000477573 TECPR1Q7Z6L1 1165 aa11.76□□□□□ -0.53
RTFDC1-207ENST00000477573 PHACTR4Q8IZ21 702 aa11.76□□□□□ -0.53
RTFDC1-207ENST00000477573 ADPRHL1Q8NDY3 354 aa11.76□□□□□ -0.53
RTFDC1-207ENST00000477573 OR8J2Q8NGG1 315 aa11.76□□□□□ -0.53
RTFDC1-207ENST00000477573 RHEBL1Q8TAI7 183 aa11.76□□□□□ -0.53
RTFDC1-207ENST00000477573 GBF1Q92538 1859 aa11.76□□□□□ -0.53
RTFDC1-207ENST00000477573 TM4SF18Q96CE8 201 aa11.76□□□□□ -0.53
RTFDC1-207ENST00000477573 TCTN2Q96GX1 697 aa11.76□□□□□ -0.53
RTFDC1-207ENST00000477573 SENP5Q96HI0 755 aaPredicted RBP11.76□□□□□ -0.53
RTFDC1-207ENST00000477573 C20orf85Q9H1P6 137 aa11.76□□□□□ -0.53
RTFDC1-207ENST00000477573 EPHX3Q9H6B9 360 aa11.76□□□□□ -0.53
RTFDC1-207ENST00000477573 ALG9Q9H6U8 611 aa11.76□□□□□ -0.53
RTFDC1-207ENST00000477573 KCNK12Q9HB15 430 aa11.76□□□□□ -0.53
RTFDC1-207ENST00000477573 ZFYVE1Q9HBF4 777 aa11.76□□□□□ -0.53
RTFDC1-207ENST00000477573 BPIFA1Q9NP55 256 aa11.76□□□□□ -0.53
RTFDC1-207ENST00000477573 ELOVL2Q9NXB9 296 aa11.76□□□□□ -0.53
RTFDC1-207ENST00000477573 CALML5Q9NZT1 146 aa11.76□□□□□ -0.53
RTFDC1-207ENST00000477573 ALPK3Q96L96 1907 aa11.76□□□□□ -0.53
RTFDC1-207ENST00000477573 OR2W5A6NFC9 320 aa11.75□□□□□ -0.53
RTFDC1-207ENST00000477573 NPIPB8E9PQR5 432 aa11.75□□□□□ -0.53
RTFDC1-207ENST00000477573 FOXE1O00358 373 aaPredicted RBP11.75□□□□□ -0.53
RTFDC1-207ENST00000477573 NRG2O14511 850 aaPredicted RBP11.75□□□□□ -0.53
RTFDC1-207ENST00000477573 MOSPD3O75425 235 aa11.75□□□□□ -0.53
RTFDC1-207ENST00000477573 IGF2P01344 180 aa11.75□□□□□ -0.53
RTFDC1-207ENST00000477573 TRBC1P01850 177 aa11.75□□□□□ -0.53
RTFDC1-207ENST00000477573 PKMP14618 531 aaKnown RBP11.75□□□□□ -0.53
RTFDC1-207ENST00000477573 CD1DP15813 335 aa11.75□□□□□ -0.53
RTFDC1-207ENST00000477573 EPCAMP16422 314 aa11.75□□□□□ -0.53
RTFDC1-207ENST00000477573 NFYBP25208 207 aa11.75□□□□□ -0.53
RTFDC1-207ENST00000477573 TACR3P29371 465 aa11.75□□□□□ -0.53
RTFDC1-207ENST00000477573 CTHP32929 405 aa11.75□□□□□ -0.53
RTFDC1-207ENST00000477573 GLP1RP43220 463 aa11.75□□□□□ -0.53
RTFDC1-207ENST00000477573 RPIAP49247 311 aa11.75□□□□□ -0.53
RTFDC1-207ENST00000477573 FOXA1P55317 472 aa11.75□□□□□ -0.53
RTFDC1-207ENST00000477573 PSMA6P60900 246 aaKnown RBP11.75□□□□□ -0.53
RTFDC1-207ENST00000477573 PPIAP62937 165 aaKnown RBP11.75□□□□□ -0.53
RTFDC1-207ENST00000477573 PTPRNQ16849 979 aa11.75□□□□□ -0.53
RTFDC1-207ENST00000477573 GXYLT1Q4G148 440 aa11.75□□□□□ -0.53
RTFDC1-207ENST00000477573 TMEM244Q5VVB8 128 aa11.75□□□□□ -0.53
RTFDC1-207ENST00000477573 Q6ZPB1 254 aaPredicted RBP11.75□□□□□ -0.53
RTFDC1-207ENST00000477573 PIM3Q86V86 326 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms