RNA–Protein interactions for RNA: ENST00000477174.1

ACTN4-205, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-205ENST00000477174 SLC7A1P30825 629 aa12.03□□□□□ -0.48
ACTN4-205ENST00000477174 SLC1A3P43003 542 aa12.03□□□□□ -0.48
ACTN4-205ENST00000477174 KIR2DL3P43628 341 aa12.03□□□□□ -0.48
ACTN4-205ENST00000477174 CLK1P49759 484 aaKnown RBP12.03□□□□□ -0.48
ACTN4-205ENST00000477174 CDK6Q00534 326 aa12.03□□□□□ -0.48
ACTN4-205ENST00000477174 SORDQ00796 357 aa12.03□□□□□ -0.48
ACTN4-205ENST00000477174 GUSBP1Q15486 140 aa12.03□□□□□ -0.48
ACTN4-205ENST00000477174 RNF220Q5VTB9 566 aa12.03□□□□□ -0.48
ACTN4-205ENST00000477174 BTLAQ7Z6A9 289 aa12.03□□□□□ -0.48
ACTN4-205ENST00000477174 DHDDSQ86SQ9 333 aa12.03□□□□□ -0.48
ACTN4-205ENST00000477174 VRK2Q86Y07 508 aa12.03□□□□□ -0.48
ACTN4-205ENST00000477174 CNEP1R1Q8N9A8 125 aa12.03□□□□□ -0.48
ACTN4-205ENST00000477174 SLC35B4Q969S0 331 aa12.03□□□□□ -0.48
ACTN4-205ENST00000477174 DOCK7Q96N67 2140 aa12.03□□□□□ -0.48
ACTN4-205ENST00000477174 ANKRD27Q96NW4 1050 aa12.03□□□□□ -0.48
ACTN4-205ENST00000477174 CGREF1Q99674 301 aa12.03□□□□□ -0.48
ACTN4-205ENST00000477174 SPATA9Q9BWV2 254 aa12.03□□□□□ -0.48
ACTN4-205ENST00000477174 RBM24Q9BX46 236 aaKnown RBP12.03□□□□□ -0.48
ACTN4-205ENST00000477174 GP6Q9HCN6 339 aa12.03□□□□□ -0.48
ACTN4-205ENST00000477174 SLC22A2O15244 555 aa12.02□□□□□ -0.49
ACTN4-205ENST00000477174 ADAM11O75078 769 aa12.02□□□□□ -0.49
ACTN4-205ENST00000477174 PLGP00747 810 aaPredicted RBP12.02□□□□□ -0.49
ACTN4-205ENST00000477174 CGAP01215 116 aa12.02□□□□□ -0.49
ACTN4-205ENST00000477174 ARAFP10398 606 aa12.02□□□□□ -0.49
ACTN4-205ENST00000477174 CD8BP10966 210 aa12.02□□□□□ -0.49
ACTN4-205ENST00000477174 SLC6A2P23975 617 aa12.02□□□□□ -0.49
ACTN4-205ENST00000477174 CTBP2P56545 445 aa12.02□□□□□ -0.49
ACTN4-205ENST00000477174 EPS8Q12929 822 aa12.02□□□□□ -0.49
ACTN4-205ENST00000477174 KLF10Q13118 480 aa12.02□□□□□ -0.49
ACTN4-205ENST00000477174 NFYCQ13952 458 aa12.02□□□□□ -0.49
ACTN4-205ENST00000477174 CYLC2Q14093 348 aaPredicted RBP12.02□□□□□ -0.49
ACTN4-205ENST00000477174 RNPS1Q15287 305 aaKnown RBP12.02□□□□□ -0.49
ACTN4-205ENST00000477174 ADRM1Q16186 407 aa12.02□□□□□ -0.49
ACTN4-205ENST00000477174 SYT14P1Q58G82 188 aa12.02□□□□□ -0.49
ACTN4-205ENST00000477174 COQ5Q5HYK3 327 aa12.02□□□□□ -0.49
ACTN4-205ENST00000477174 ZNF311Q5JNZ3 666 aa12.02□□□□□ -0.49
ACTN4-205ENST00000477174 RPS26P11Q5JNZ5 115 aaPredicted RBP12.02□□□□□ -0.49
ACTN4-205ENST00000477174 PPP4R4Q6NUP7 873 aa12.02□□□□□ -0.49
ACTN4-205ENST00000477174 ZNF836Q6ZNA1 936 aa12.02□□□□□ -0.49
ACTN4-205ENST00000477174 ZNF550Q7Z398 422 aa12.02□□□□□ -0.49
ACTN4-205ENST00000477174 ADGRG3Q86Y34 549 aa12.02□□□□□ -0.49
ACTN4-205ENST00000477174 KRT73Q86Y46 540 aa12.02□□□□□ -0.49
ACTN4-205ENST00000477174 SLC43A2Q8N370 569 aa12.02□□□□□ -0.49
ACTN4-205ENST00000477174 CLIP4Q8N3C7 705 aa12.02□□□□□ -0.49
ACTN4-205ENST00000477174 CPPED1Q9BRF8 314 aaPredicted RBP12.02□□□□□ -0.49
ACTN4-205ENST00000477174 SLC39A3Q9BRY0 314 aa12.02□□□□□ -0.49
ACTN4-205ENST00000477174 SPATA5L1Q9BVQ7 753 aa12.02□□□□□ -0.49
ACTN4-205ENST00000477174 ADAM19Q9H013 955 aa12.02□□□□□ -0.49
ACTN4-205ENST00000477174 IKZF5Q9H5V7 419 aa12.02□□□□□ -0.49
ACTN4-205ENST00000477174 MCCC2Q9HCC0 563 aa12.02□□□□□ -0.49
ACTN4-205ENST00000477174 PLSCR4Q9NRQ2 329 aa12.02□□□□□ -0.49
ACTN4-205ENST00000477174 CHRNA9Q9UGM1 479 aa12.02□□□□□ -0.49
ACTN4-205ENST00000477174 ZNF443Q9Y2A4 671 aaPredicted RBP12.02□□□□□ -0.49
ACTN4-205ENST00000477174 EMC9Q9Y3B6 208 aa12.02□□□□□ -0.49
ACTN4-205ENST00000477174 KIAA1549Q9HCM3 1950 aa12.01□□□□□ -0.49
ACTN4-205ENST00000477174 LRBAP50851 2863 aa12.01□□□□□ -0.49
ACTN4-205ENST00000477174 HCFC1P51610 2035 aa12.01□□□□□ -0.49
ACTN4-205ENST00000477174 HEATR5AQ86XA9 2040 aa12.01□□□□□ -0.49
ACTN4-205ENST00000477174 ANKHD1Q8IWZ3 2542 aaKnown RBP12.01□□□□□ -0.49
ACTN4-205ENST00000477174 MED12LQ86YW9 2145 aa12.01□□□□□ -0.49
ACTN4-205ENST00000477174 FBP2O00757 339 aa12.01□□□□□ -0.49
ACTN4-205ENST00000477174 AP3D1O14617 1153 aa12.01□□□□□ -0.49
ACTN4-205ENST00000477174 ZNF208O43345 1280 aa12.01□□□□□ -0.49
ACTN4-205ENST00000477174 SS18L1O75177 396 aaPredicted RBP12.01□□□□□ -0.49
ACTN4-205ENST00000477174 SERPINB7O75635 380 aa12.01□□□□□ -0.49
ACTN4-205ENST00000477174 SMNDC1O75940 238 aaKnown RBP eCLIP12.01□□□□□ -0.49
ACTN4-205ENST00000477174 PRKD3O94806 890 aa12.01□□□□□ -0.49
ACTN4-205ENST00000477174 PRKAR1BP31321 381 aa12.01□□□□□ -0.49
ACTN4-205ENST00000477174 ACAA2P42765 397 aaKnown RBP12.01□□□□□ -0.49
ACTN4-205ENST00000477174 CPA2P48052 419 aa12.01□□□□□ -0.49
ACTN4-205ENST00000477174 POLR2HP52434 150 aaKnown RBP12.01□□□□□ -0.49
ACTN4-205ENST00000477174 COPZ1P61923 177 aa12.01□□□□□ -0.49
ACTN4-205ENST00000477174 CSNK2A1P68400 391 aaPredicted RBP12.01□□□□□ -0.49
ACTN4-205ENST00000477174 RBBP4Q09028 425 aa12.01□□□□□ -0.49
ACTN4-205ENST00000477174 SF3A3Q12874 501 aaKnown RBP eCLIP12.01□□□□□ -0.492e-6■□□□□ 9.2
ACTN4-205ENST00000477174 MAPRE2Q15555 327 aa12.01□□□□□ -0.49
ACTN4-205ENST00000477174 ZNF239Q16600 458 aaKnown RBP12.01□□□□□ -0.49
ACTN4-205ENST00000477174 VWA1Q6PCB0 445 aa12.01□□□□□ -0.49
ACTN4-205ENST00000477174 TMPPEQ6ZT21 453 aa12.01□□□□□ -0.49
ACTN4-205ENST00000477174 LUZP2Q86TE4 346 aa12.01□□□□□ -0.49
ACTN4-205ENST00000477174 C10orf111Q8N326 155 aa12.01□□□□□ -0.49
ACTN4-205ENST00000477174 OR6K3Q8NGY3 331 aa12.01□□□□□ -0.49
ACTN4-205ENST00000477174 NFKBIDQ8NI38 313 aa12.01□□□□□ -0.49
ACTN4-205ENST00000477174 RNF128Q8TEB7 428 aa12.01□□□□□ -0.49
ACTN4-205ENST00000477174 FAM222BQ8WU58 562 aa12.01□□□□□ -0.49
ACTN4-205ENST00000477174 ROBO4Q8WZ75 1007 aa12.01□□□□□ -0.49
ACTN4-205ENST00000477174 OR5B2Q96R09 309 aa12.01□□□□□ -0.49
ACTN4-205ENST00000477174 ZNF607Q96SK3 696 aa12.01□□□□□ -0.49
ACTN4-205ENST00000477174 SH3GL1Q99961 368 aa12.01□□□□□ -0.49
ACTN4-205ENST00000477174 ZNF559Q9BR84 538 aa12.01□□□□□ -0.49
ACTN4-205ENST00000477174 SRXN1Q9BYN0 137 aa12.01□□□□□ -0.49
ACTN4-205ENST00000477174 COQ10BQ9H8M1 238 aa12.01□□□□□ -0.49
ACTN4-205ENST00000477174 CTPS2Q9NRF8 586 aa12.01□□□□□ -0.49
ACTN4-205ENST00000477174 GALNT8Q9NY28 637 aa12.01□□□□□ -0.49
ACTN4-205ENST00000477174 ELOVL5Q9NYP7 299 aa12.01□□□□□ -0.49
ACTN4-205ENST00000477174 HDGFL3Q9Y3E1 203 aa12.01□□□□□ -0.49
ACTN4-205ENST00000477174 FBN2P35556 2912 aa12.01□□□□□ -0.49
ACTN4-205ENST00000477174 TMED7-TICAM2A0A0A6YYA0 188 aa12□□□□□ -0.49
ACTN4-205ENST00000477174 A0A1W2PNR3 127 aa12□□□□□ -0.49
ACTN4-205ENST00000477174 PRORSD1PA6NEY8 169 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms