RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 POLQO75417 2590 aa9.14□□□□□ -0.95
CCM2-208ENST00000476594 SPG11Q96JI7 2443 aa9.13□□□□□ -0.95
CCM2-208ENST00000476594 A0A096LPI6 279 aa9.13□□□□□ -0.95
CCM2-208ENST00000476594 CFAP73A6NFT4 308 aa9.13□□□□□ -0.95
CCM2-208ENST00000476594 EVPLLA8MZ36 301 aa9.13□□□□□ -0.95
CCM2-208ENST00000476594 SULT2B1O00204 365 aa9.13□□□□□ -0.95
CCM2-208ENST00000476594 CLIC1O00299 241 aa9.13□□□□□ -0.95
CCM2-208ENST00000476594 NR5A2O00482 541 aa9.13□□□□□ -0.95
CCM2-208ENST00000476594 FAAHO00519 579 aa9.13□□□□□ -0.95
CCM2-208ENST00000476594 NTN1O95631 604 aa9.13□□□□□ -0.95
CCM2-208ENST00000476594 CGAP01215 116 aa9.13□□□□□ -0.95
CCM2-208ENST00000476594 BCHEP06276 602 aa9.13□□□□□ -0.95
CCM2-208ENST00000476594 YES1P07947 543 aa9.13□□□□□ -0.95
CCM2-208ENST00000476594 THBS1P07996 1170 aa9.13□□□□□ -0.95
CCM2-208ENST00000476594 VIMP08670 466 aaKnown RBP9.13□□□□□ -0.95
CCM2-208ENST00000476594 AGTR1P30556 359 aa9.13□□□□□ -0.95
CCM2-208ENST00000476594 UGT2B10P36537 528 aa9.13□□□□□ -0.95
CCM2-208ENST00000476594 POLR2HP52434 150 aaKnown RBP9.13□□□□□ -0.95
CCM2-208ENST00000476594 FAM27E3Q08E93 113 aa9.13□□□□□ -0.95
CCM2-208ENST00000476594 FUT5Q11128 374 aa9.13□□□□□ -0.95
CCM2-208ENST00000476594 MAPK14Q16539 360 aa9.13□□□□□ -0.95
CCM2-208ENST00000476594 ZNF474Q6S9Z5 364 aaPredicted RBP9.13□□□□□ -0.95
CCM2-208ENST00000476594 TMPPEQ6ZT21 453 aa9.13□□□□□ -0.95
CCM2-208ENST00000476594 SSX8Q7RTT4 187 aa9.13□□□□□ -0.95
CCM2-208ENST00000476594 ZNF550Q7Z398 422 aa9.13□□□□□ -0.95
CCM2-208ENST00000476594 CDC20BQ86Y33 519 aa9.13□□□□□ -0.95
CCM2-208ENST00000476594 KRT73Q86Y46 540 aa9.13□□□□□ -0.95
CCM2-208ENST00000476594 ANKFN1Q8N957 763 aa9.13□□□□□ -0.95
CCM2-208ENST00000476594 ZNF610Q8N9Z0 462 aa9.13□□□□□ -0.95
CCM2-208ENST00000476594 STEAP2Q8NFT2 490 aa9.13□□□□□ -0.95
CCM2-208ENST00000476594 OR9I1Q8NGQ6 314 aa9.13□□□□□ -0.95
CCM2-208ENST00000476594 OR52P1PQ8NH57 321 aa9.13□□□□□ -0.95
CCM2-208ENST00000476594 BBS10Q8TAM1 723 aa9.13□□□□□ -0.95
CCM2-208ENST00000476594 VPS33AQ96AX1 596 aa9.13□□□□□ -0.95
CCM2-208ENST00000476594 SPDL1Q96EA4 605 aa9.13□□□□□ -0.95
CCM2-208ENST00000476594 SPATA5L1Q9BVQ7 753 aa9.13□□□□□ -0.95
CCM2-208ENST00000476594 COQ10BQ9H8M1 238 aa9.13□□□□□ -0.95
CCM2-208ENST00000476594 NGBQ9NPG2 151 aa9.13□□□□□ -0.95
CCM2-208ENST00000476594 CCDC167Q9P0B6 97 aa9.13□□□□□ -0.95
CCM2-208ENST00000476594 ST6GALNAC2Q9UJ37 374 aa9.13□□□□□ -0.95
CCM2-208ENST00000476594 KCNE5Q9UJ90 142 aa9.13□□□□□ -0.95
CCM2-208ENST00000476594 CLEC4AQ9UMR7 237 aa9.13□□□□□ -0.95
CCM2-208ENST00000476594 GPR52Q9Y2T5 361 aa9.13□□□□□ -0.95
CCM2-208ENST00000476594 PCNX3Q9H6A9 2034 aa9.12□□□□□ -0.95
CCM2-208ENST00000476594 CENPVL1A0A0U1RR11 272 aa9.12□□□□□ -0.95
CCM2-208ENST00000476594 A0A1W2PNR3 127 aa9.12□□□□□ -0.95
CCM2-208ENST00000476594 GPR171O14626 319 aa9.12□□□□□ -0.95
CCM2-208ENST00000476594 ZNF208O43345 1280 aa9.12□□□□□ -0.95
CCM2-208ENST00000476594 EIF1BO60739 113 aaKnown RBP9.12□□□□□ -0.95
CCM2-208ENST00000476594 PMS2P2O95744 297 aa9.12□□□□□ -0.95
CCM2-208ENST00000476594 RAF1P04049 648 aa9.12□□□□□ -0.95
CCM2-208ENST00000476594 CHRM4P08173 479 aa9.12□□□□□ -0.95
CCM2-208ENST00000476594 TROVE2P10155 538 aaKnown RBP eCLIP9.12□□□□□ -0.95
CCM2-208ENST00000476594 ETFAP13804 333 aa9.12□□□□□ -0.95
CCM2-208ENST00000476594 NCF2P19878 526 aaPredicted RBP9.12□□□□□ -0.95
CCM2-208ENST00000476594 RPS4Y1P22090 263 aaKnown RBP9.12□□□□□ -0.95
CCM2-208ENST00000476594 CXCR1P25024 350 aa9.12□□□□□ -0.95
CCM2-208ENST00000476594 DNAJA1P31689 397 aaKnown RBP9.12□□□□□ -0.95
CCM2-208ENST00000476594 SLC1A3P43003 542 aa9.12□□□□□ -0.95
CCM2-208ENST00000476594 IDH2P48735 452 aaKnown RBP9.12□□□□□ -0.95
CCM2-208ENST00000476594 DIO1P49895 249 aa9.12□□□□□ -0.95
CCM2-208ENST00000476594 ART1P52961 327 aa9.12□□□□□ -0.95
CCM2-208ENST00000476594 NR1H2P55055 460 aa9.12□□□□□ -0.95
CCM2-208ENST00000476594 RASGEF1BQ0VAM2 473 aa9.12□□□□□ -0.95
CCM2-208ENST00000476594 KEAP1Q14145 624 aa9.12□□□□□ -0.95
CCM2-208ENST00000476594 RGNQ15493 299 aa9.12□□□□□ -0.95
CCM2-208ENST00000476594 COX20Q5RI15 118 aa9.12□□□□□ -0.95
CCM2-208ENST00000476594 MRPL2Q5T653 305 aaKnown RBP9.12□□□□□ -0.95
CCM2-208ENST00000476594 RNF220Q5VTB9 566 aa9.12□□□□□ -0.95
CCM2-208ENST00000476594 BLOC1S3Q6QNY0 202 aa9.12□□□□□ -0.95
CCM2-208ENST00000476594 BHLHE22Q8NFJ8 381 aaPredicted RBP9.12□□□□□ -0.95
CCM2-208ENST00000476594 PIGXQ8TBF5 258 aa9.12□□□□□ -0.95
CCM2-208ENST00000476594 ABHD3Q8WU67 409 aa9.12□□□□□ -0.95
CCM2-208ENST00000476594 ROBO4Q8WZ75 1007 aa9.12□□□□□ -0.95
CCM2-208ENST00000476594 GTF2H4Q92759 462 aa9.12□□□□□ -0.95
CCM2-208ENST00000476594 SLC35B4Q969S0 331 aa9.12□□□□□ -0.95
CCM2-208ENST00000476594 NPAS1Q99742 590 aa9.12□□□□□ -0.95
CCM2-208ENST00000476594 EBF4Q9BQW3 602 aa9.12□□□□□ -0.95
CCM2-208ENST00000476594 NAA11Q9BSU3 229 aaPredicted RBP9.12□□□□□ -0.95
CCM2-208ENST00000476594 CCDC106Q9BWC9 280 aa9.12□□□□□ -0.95
CCM2-208ENST00000476594 SRXN1Q9BYN0 137 aa9.12□□□□□ -0.95
CCM2-208ENST00000476594 C12orf49Q9H741 205 aa9.12□□□□□ -0.95
CCM2-208ENST00000476594 PCDHB14Q9Y5E9 798 aa9.12□□□□□ -0.95
CCM2-208ENST00000476594 TEP1Q99973 2627 aaKnown RBP9.12□□□□□ -0.95
CCM2-208ENST00000476594 DSPPQ9NZW4 1301 aa9.11□□□□□ -0.95
CCM2-208ENST00000476594 TMED7-TICAM2A0A0A6YYA0 188 aa9.11□□□□□ -0.95
CCM2-208ENST00000476594 PRORSD1PA6NEY8 169 aa9.11□□□□□ -0.95
CCM2-208ENST00000476594 ZNF724A8MTY0 619 aa9.11□□□□□ -0.95
CCM2-208ENST00000476594 ANGPT2O15123 496 aa9.11□□□□□ -0.95
CCM2-208ENST00000476594 CYTIPO60759 359 aa9.11□□□□□ -0.95
CCM2-208ENST00000476594 CNOT4O95628 575 aaKnown RBP9.11□□□□□ -0.95
CCM2-208ENST00000476594 HRGP04196 525 aa9.11□□□□□ -0.95
CCM2-208ENST00000476594 PSMB1P20618 241 aaKnown RBP9.11□□□□□ -0.95
CCM2-208ENST00000476594 CRYGSP22914 178 aa9.11□□□□□ -0.95
CCM2-208ENST00000476594 IL32P24001 234 aa9.11□□□□□ -0.95
CCM2-208ENST00000476594 SHC1P29353 583 aa9.11□□□□□ -0.95
CCM2-208ENST00000476594 EPS8Q12929 822 aa9.11□□□□□ -0.95
CCM2-208ENST00000476594 P2RY6Q15077 328 aa9.11□□□□□ -0.95
CCM2-208ENST00000476594 PDK3Q15120 406 aa9.11□□□□□ -0.95
CCM2-208ENST00000476594 AGKQ53H12 422 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms