RNA–Protein interactions for RNA: ENST00000474557.1

HMGN1P10-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 10, humanhuman

BASIC

Gene HMGN1P10, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P10-201ENST00000474557 AQRO60306 1485 aaKnown RBP eCLIP0.8□□□□□ -2.28
HMGN1P10-201ENST00000474557 LAMA3Q16787 3333 aa0.79□□□□□ -2.28
HMGN1P10-201ENST00000474557 PCM1Q15154 2024 aa0.79□□□□□ -2.28
HMGN1P10-201ENST00000474557 NCOR2Q9Y618 2525 aa0.79□□□□□ -2.28
HMGN1P10-201ENST00000474557 KDM5AP29375 1690 aaKnown RBP0.79□□□□□ -2.28
HMGN1P10-201ENST00000474557 FBLL1A6NHQ2 334 aaKnown RBP0.79□□□□□ -2.28
HMGN1P10-201ENST00000474557 FCN1O00602 326 aa0.79□□□□□ -2.28
HMGN1P10-201ENST00000474557 STX6O43752 255 aa0.79□□□□□ -2.28
HMGN1P10-201ENST00000474557 TRIM3O75382 744 aaPredicted RBP0.79□□□□□ -2.28
HMGN1P10-201ENST00000474557 CTDNEP1O95476 244 aa0.79□□□□□ -2.28
HMGN1P10-201ENST00000474557 CRISP2P16562 243 aa0.79□□□□□ -2.28
HMGN1P10-201ENST00000474557 CD34P28906 385 aa0.79□□□□□ -2.28
HMGN1P10-201ENST00000474557 HTR5AP47898 357 aa0.79□□□□□ -2.28
HMGN1P10-201ENST00000474557 CNN1P51911 297 aaKnown RBP0.79□□□□□ -2.28
HMGN1P10-201ENST00000474557 STX1BP61266 288 aa0.79□□□□□ -2.28
HMGN1P10-201ENST00000474557 HERVK_113P63132 956 aa0.79□□□□□ -2.28
HMGN1P10-201ENST00000474557 ERVK-8P63133 956 aa0.79□□□□□ -2.28
HMGN1P10-201ENST00000474557 GALK2Q01415 458 aa0.79□□□□□ -2.28
HMGN1P10-201ENST00000474557 NME3Q13232 169 aa0.79□□□□□ -2.28
HMGN1P10-201ENST00000474557 FUT11Q495W5 492 aa0.79□□□□□ -2.28
HMGN1P10-201ENST00000474557 CASC10Q5T4H9 136 aa0.79□□□□□ -2.28
HMGN1P10-201ENST00000474557 TMEM270Q6UE05 265 aa0.79□□□□□ -2.28
HMGN1P10-201ENST00000474557 Q6ZR03 302 aa0.79□□□□□ -2.28
HMGN1P10-201ENST00000474557 GDPD3Q7L5L3 318 aa0.79□□□□□ -2.28
HMGN1P10-201ENST00000474557 ARCQ7LC44 396 aa0.79□□□□□ -2.28
HMGN1P10-201ENST00000474557 GALNTL5Q7Z4T8 443 aa0.79□□□□□ -2.28
HMGN1P10-201ENST00000474557 GOLGA7Q7Z5G4 137 aa0.79□□□□□ -2.28
HMGN1P10-201ENST00000474557 RALGPS2Q86X27 583 aaPredicted RBP0.79□□□□□ -2.28
HMGN1P10-201ENST00000474557 MFSD6LQ8IWD5 586 aa0.79□□□□□ -2.28
HMGN1P10-201ENST00000474557 NRMQ8IXM6 262 aa0.79□□□□□ -2.28
HMGN1P10-201ENST00000474557 C12orf56Q8IXR9 622 aa0.79□□□□□ -2.28
HMGN1P10-201ENST00000474557 ARFGAP2Q8N6H7 521 aa0.79□□□□□ -2.28
HMGN1P10-201ENST00000474557 OR8H1Q8NGG4 311 aa0.79□□□□□ -2.28
HMGN1P10-201ENST00000474557 ATP6V0A1Q93050 837 aa0.79□□□□□ -2.28
HMGN1P10-201ENST00000474557 ADIPOR1Q96A54 375 aa0.79□□□□□ -2.28
HMGN1P10-201ENST00000474557 ERP27Q96DN0 273 aa0.79□□□□□ -2.28
HMGN1P10-201ENST00000474557 C5orf30Q96GV9 206 aa0.79□□□□□ -2.28
HMGN1P10-201ENST00000474557 ZMAT2Q96NC0 199 aaKnown RBP0.79□□□□□ -2.28
HMGN1P10-201ENST00000474557 KCNA7Q96RP8 456 aa0.79□□□□□ -2.28
HMGN1P10-201ENST00000474557 TMEM121Q9BTD3 319 aa0.79□□□□□ -2.28
HMGN1P10-201ENST00000474557 ERVK-6Q9BXR3 956 aa0.79□□□□□ -2.28
HMGN1P10-201ENST00000474557 ULBP2Q9BZM5 246 aa0.79□□□□□ -2.28
HMGN1P10-201ENST00000474557 SLC25A22Q9H936 323 aa0.79□□□□□ -2.28
HMGN1P10-201ENST00000474557 COPS7BQ9H9Q2 264 aaPredicted RBP0.79□□□□□ -2.28
HMGN1P10-201ENST00000474557 UTP6Q9NYH9 597 aaKnown RBP0.79□□□□□ -2.28
HMGN1P10-201ENST00000474557 XPO7Q9UIA9 1087 aaKnown RBP0.79□□□□□ -2.28
HMGN1P10-201ENST00000474557 ZNF229Q9UJW7 825 aa0.79□□□□□ -2.28
HMGN1P10-201ENST00000474557 PLLPQ9Y342 182 aa0.79□□□□□ -2.28
HMGN1P10-201ENST00000474557 MMACHCQ9Y4U1 282 aa0.79□□□□□ -2.28
HMGN1P10-201ENST00000474557 YTHDF2Q9Y5A9 579 aaKnown RBP0.79□□□□□ -2.28
HMGN1P10-201ENST00000474557 FRMPD3Q5JV73 1810 aa0.79□□□□□ -2.28
HMGN1P10-201ENST00000474557 PLEKHH1Q9ULM0 1364 aa0.79□□□□□ -2.28
HMGN1P10-201ENST00000474557 LRRK2Q5S007 2527 aa0.79□□□□□ -2.28
HMGN1P10-201ENST00000474557 POLQO75417 2590 aa0.79□□□□□ -2.28
HMGN1P10-201ENST00000474557 NBEAL1Q6ZS30 2694 aa0.79□□□□□ -2.28
HMGN1P10-201ENST00000474557 SPEGQ15772 3267 aa0.79□□□□□ -2.28
HMGN1P10-201ENST00000474557 FLNCQ14315 2725 aa0.79□□□□□ -2.28
HMGN1P10-201ENST00000474557 GPATCH8Q9UKJ3 1502 aaKnown RBP0.79□□□□□ -2.28
HMGN1P10-201ENST00000474557 EIF4G3O43432 1585 aaKnown RBP0.79□□□□□ -2.28
HMGN1P10-201ENST00000474557 ADCY10Q96PN6 1610 aa0.78□□□□□ -2.28
HMGN1P10-201ENST00000474557 NCOR1O75376 2440 aa0.78□□□□□ -2.28
HMGN1P10-201ENST00000474557 CEP290O15078 2479 aa0.78□□□□□ -2.28
HMGN1P10-201ENST00000474557 ANKHD1Q8IWZ3 2542 aaKnown RBP0.78□□□□□ -2.28
HMGN1P10-201ENST00000474557 DCHS1Q96JQ0 3298 aa0.78□□□□□ -2.28
HMGN1P10-201ENST00000474557 FLNAP21333 2647 aaKnown RBP0.78□□□□□ -2.28
HMGN1P10-201ENST00000474557 NF1P21359 2839 aa0.78□□□□□ -2.28
HMGN1P10-201ENST00000474557 IGKV3D-11A0A0A0MRZ8 115 aa0.78□□□□□ -2.28
HMGN1P10-201ENST00000474557 A0A0G2JRQ6 117 aa0.78□□□□□ -2.28
HMGN1P10-201ENST00000474557 TMEM89A2RUT3 159 aa0.78□□□□□ -2.28
HMGN1P10-201ENST00000474557 J3QKU1 62 aa0.78□□□□□ -2.28
HMGN1P10-201ENST00000474557 TLR4O00206 839 aa0.78□□□□□ -2.28
HMGN1P10-201ENST00000474557 ZNF263O14978 683 aa0.78□□□□□ -2.28
HMGN1P10-201ENST00000474557 ALOX15BO15296 676 aa0.78□□□□□ -2.28
HMGN1P10-201ENST00000474557 SLITRK3O94933 977 aa0.78□□□□□ -2.28
HMGN1P10-201ENST00000474557 PNMTP11086 282 aa0.78□□□□□ -2.28
HMGN1P10-201ENST00000474557 MUC1P15941 1255 aaPredicted RBP0.78□□□□□ -2.28
HMGN1P10-201ENST00000474557 ZNF18P17022 549 aa0.78□□□□□ -2.28
HMGN1P10-201ENST00000474557 XRCC1P18887 633 aaPredicted RBP0.78□□□□□ -2.28
HMGN1P10-201ENST00000474557 TSPAN8P19075 237 aa0.78□□□□□ -2.28
HMGN1P10-201ENST00000474557 NMUP48645 174 aa0.78□□□□□ -2.28
HMGN1P10-201ENST00000474557 CACNG7P62955 275 aa0.78□□□□□ -2.28
HMGN1P10-201ENST00000474557 SLC10A7Q0GE19 358 aa0.78□□□□□ -2.28
HMGN1P10-201ENST00000474557 RCN2Q14257 317 aa0.78□□□□□ -2.28
HMGN1P10-201ENST00000474557 CARTPTQ16568 116 aa0.78□□□□□ -2.28
HMGN1P10-201ENST00000474557 NRF1Q16656 503 aa0.78□□□□□ -2.28
HMGN1P10-201ENST00000474557 TYSND1Q2T9J0 566 aa0.78□□□□□ -2.28
HMGN1P10-201ENST00000474557 AGKQ53H12 422 aa0.78□□□□□ -2.28
HMGN1P10-201ENST00000474557 HECTD3Q5T447 861 aa0.78□□□□□ -2.28
HMGN1P10-201ENST00000474557 PVRIGQ6DKI7 326 aa0.78□□□□□ -2.28
HMGN1P10-201ENST00000474557 C6orf89Q6UWU4 347 aa0.78□□□□□ -2.28
HMGN1P10-201ENST00000474557 ZNF621Q6ZSS3 439 aa0.78□□□□□ -2.28
HMGN1P10-201ENST00000474557 RFLNAQ6ZTI6 216 aa0.78□□□□□ -2.28
HMGN1P10-201ENST00000474557 C1orf186Q6ZWK4 172 aa0.78□□□□□ -2.28
HMGN1P10-201ENST00000474557 LRRC17Q8N6Y2 441 aa0.78□□□□□ -2.28
HMGN1P10-201ENST00000474557 NEK11Q8NG66 645 aa0.78□□□□□ -2.28
HMGN1P10-201ENST00000474557 FIBINQ8TAL6 211 aa0.78□□□□□ -2.28
HMGN1P10-201ENST00000474557 ELMO2Q96JJ3 720 aa0.78□□□□□ -2.28
HMGN1P10-201ENST00000474557 CYP2S1Q96SQ9 504 aa0.78□□□□□ -2.28
HMGN1P10-201ENST00000474557 TSG101Q99816 390 aa0.78□□□□□ -2.28
HMGN1P10-201ENST00000474557 NACA2Q9H009 215 aa0.78□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms