RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 LOC100131303A0A0U1RQF7 123 aa5.28□□□□□ -1.56
SMC5-202ENST00000471372 E9PLD3 99 aa5.28□□□□□ -1.56
SMC5-202ENST00000471372 ARHGEF9O43307 516 aa5.28□□□□□ -1.56
SMC5-202ENST00000471372 OR10H3O60404 316 aa5.28□□□□□ -1.56
SMC5-202ENST00000471372 NOL4O94818 638 aa5.28□□□□□ -1.56
SMC5-202ENST00000471372 STAG3L3P0CL85 134 aa5.28□□□□□ -1.56
SMC5-202ENST00000471372 CT45A10P0DMU9 189 aa5.28□□□□□ -1.56
SMC5-202ENST00000471372 MCF2P10911 925 aa5.28□□□□□ -1.56
SMC5-202ENST00000471372 TNNI1P19237 187 aa5.28□□□□□ -1.56
SMC5-202ENST00000471372 XCR1P46094 333 aa5.28□□□□□ -1.56
SMC5-202ENST00000471372 DAP3P51398 398 aaKnown RBP5.28□□□□□ -1.56
SMC5-202ENST00000471372 RPS15P62841 145 aaKnown RBP5.28□□□□□ -1.56
SMC5-202ENST00000471372 NHLRC3Q5JS37 347 aa5.28□□□□□ -1.56
SMC5-202ENST00000471372 UTS2BQ765I0 119 aa5.28□□□□□ -1.56
SMC5-202ENST00000471372 TMCO2Q7Z6W1 182 aaPredicted RBP5.28□□□□□ -1.56
SMC5-202ENST00000471372 MCOLN2Q8IZK6 566 aa5.28□□□□□ -1.56
SMC5-202ENST00000471372 MTURNQ8N3F0 131 aa5.28□□□□□ -1.56
SMC5-202ENST00000471372 C9orf106Q8NAJ2 232 aa5.28□□□□□ -1.56
SMC5-202ENST00000471372 BPIFCQ8NFQ6 507 aa5.28□□□□□ -1.56
SMC5-202ENST00000471372 NAF1Q96HR8 494 aaKnown RBP5.28□□□□□ -1.56
SMC5-202ENST00000471372 PANX2Q96RD6 677 aa5.28□□□□□ -1.56
SMC5-202ENST00000471372 CLCC1Q96S66 551 aa5.28□□□□□ -1.56
SMC5-202ENST00000471372 RNF2Q99496 336 aa5.28□□□□□ -1.56
SMC5-202ENST00000471372 BCL7BQ9BQE9 202 aa5.28□□□□□ -1.56
SMC5-202ENST00000471372 BARHL1Q9BZE3 327 aa5.28□□□□□ -1.56
SMC5-202ENST00000471372 RAB34Q9BZG1 259 aa5.28□□□□□ -1.56
SMC5-202ENST00000471372 NAT10Q9H0A0 1025 aaKnown RBP5.28□□□□□ -1.56
SMC5-202ENST00000471372 GLT8D2Q9H1C3 349 aa5.28□□□□□ -1.56
SMC5-202ENST00000471372 OPN3Q9H1Y3 402 aaPredicted RBP5.28□□□□□ -1.56
SMC5-202ENST00000471372 CAB39LQ9H9S4 337 aa5.28□□□□□ -1.56
SMC5-202ENST00000471372 BFARQ9NZS9 450 aa5.28□□□□□ -1.56
SMC5-202ENST00000471372 PSMC3IPQ9P2W1 217 aaPredicted RBP5.28□□□□□ -1.56
SMC5-202ENST00000471372 IKZF2Q9UKS7 526 aa5.28□□□□□ -1.56
SMC5-202ENST00000471372 SAMD4AQ9UPU9 718 aaKnown RBP5.28□□□□□ -1.56
SMC5-202ENST00000471372 TRDCB7Z8K6 153 aa5.27□□□□□ -1.57
SMC5-202ENST00000471372 SAP18O00422 153 aaKnown RBP5.27□□□□□ -1.57
SMC5-202ENST00000471372 LSM1O15116 133 aaKnown RBP5.27□□□□□ -1.57
SMC5-202ENST00000471372 EDIL3O43854 480 aa5.27□□□□□ -1.57
SMC5-202ENST00000471372 SLC2A10O95528 541 aa5.27□□□□□ -1.57
SMC5-202ENST00000471372 KRT6AP02538 564 aa5.27□□□□□ -1.57
SMC5-202ENST00000471372 P04436 131 aa5.27□□□□□ -1.57
SMC5-202ENST00000471372 CCT6AP40227 531 aaKnown RBP5.27□□□□□ -1.57
SMC5-202ENST00000471372 CRYBB2P43320 205 aa5.27□□□□□ -1.57
SMC5-202ENST00000471372 CRYBB1P53674 252 aaPredicted RBP5.27□□□□□ -1.57
SMC5-202ENST00000471372 SLC8A3P57103 927 aa5.27□□□□□ -1.57
SMC5-202ENST00000471372 IL18Q14116 193 aa5.27□□□□□ -1.57
SMC5-202ENST00000471372 HADHQ16836 314 aaKnown RBP5.27□□□□□ -1.57
SMC5-202ENST00000471372 ISXQ2M1V0 245 aa5.27□□□□□ -1.57
SMC5-202ENST00000471372 ANGPTL8Q6UXH0 198 aa5.27□□□□□ -1.57
SMC5-202ENST00000471372 OR52H1Q8NGJ2 320 aa5.27□□□□□ -1.57
SMC5-202ENST00000471372 OR6T1Q8NGN1 323 aa5.27□□□□□ -1.57
SMC5-202ENST00000471372 ELMO1Q92556 727 aa5.27□□□□□ -1.57
SMC5-202ENST00000471372 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.27□□□□□ -1.57
SMC5-202ENST00000471372 CXorf40BQ96DE9 158 aa5.27□□□□□ -1.57
SMC5-202ENST00000471372 MS4A14Q96JA4 679 aa5.27□□□□□ -1.57
SMC5-202ENST00000471372 SERAC1Q96JX3 654 aa5.27□□□□□ -1.57
SMC5-202ENST00000471372 POM121L2Q96KW2 1035 aa5.27□□□□□ -1.57
SMC5-202ENST00000471372 TBX15Q96SF7 602 aa5.27□□□□□ -1.57
SMC5-202ENST00000471372 ADNPQ9H2P0 1102 aa5.27□□□□□ -1.57
SMC5-202ENST00000471372 PPA2Q9H2U2 334 aa5.27□□□□□ -1.57
SMC5-202ENST00000471372 PNNQ9H307 717 aaKnown RBP5.27□□□□□ -1.57
SMC5-202ENST00000471372 GCNT4Q9P109 453 aa5.27□□□□□ -1.57
SMC5-202ENST00000471372 WARS2Q9UGM6 360 aaKnown RBP5.27□□□□□ -1.57
SMC5-202ENST00000471372 PHF11Q9UIL8 331 aa5.27□□□□□ -1.57
SMC5-202ENST00000471372 PEX16Q9Y5Y5 336 aa5.27□□□□□ -1.57
SMC5-202ENST00000471372 A0A1B0GUS0 222 aa5.26□□□□□ -1.57
SMC5-202ENST00000471372 PRSS44E7EML9 344 aa5.26□□□□□ -1.57
SMC5-202ENST00000471372 SULT2B1O00204 365 aa5.26□□□□□ -1.57
SMC5-202ENST00000471372 SLC17A2O00624 439 aa5.26□□□□□ -1.57
SMC5-202ENST00000471372 LATO43561 262 aa5.26□□□□□ -1.57
SMC5-202ENST00000471372 VENTXO95231 258 aa5.26□□□□□ -1.57
SMC5-202ENST00000471372 LYPD3O95274 346 aa5.26□□□□□ -1.57
SMC5-202ENST00000471372 GNA14O95837 355 aa5.26□□□□□ -1.57
SMC5-202ENST00000471372 RENP00797 406 aa5.26□□□□□ -1.57
SMC5-202ENST00000471372 FTH1P02794 183 aa5.26□□□□□ -1.57
SMC5-202ENST00000471372 LAMP1P11279 417 aa5.26□□□□□ -1.57
SMC5-202ENST00000471372 YWHABP31946 246 aaKnown RBP5.26□□□□□ -1.57
SMC5-202ENST00000471372 STARP49675 285 aa5.26□□□□□ -1.57
SMC5-202ENST00000471372 PPIL2Q13356 520 aa5.26□□□□□ -1.57
SMC5-202ENST00000471372 GRB7Q14451 532 aa5.26□□□□□ -1.57
SMC5-202ENST00000471372 UFSP1Q6NVU6 142 aa5.26□□□□□ -1.57
SMC5-202ENST00000471372 TIPARPQ7Z3E1 657 aaKnown RBP5.26□□□□□ -1.57
SMC5-202ENST00000471372 ABHD12Q8N2K0 398 aa5.26□□□□□ -1.57
SMC5-202ENST00000471372 CEP112Q8N8E3 955 aa5.26□□□□□ -1.57
SMC5-202ENST00000471372 PAQR8Q8TEZ7 354 aa5.26□□□□□ -1.57
SMC5-202ENST00000471372 PSMG2Q969U7 264 aa5.26□□□□□ -1.57
SMC5-202ENST00000471372 NUS1Q96E22 293 aa5.26□□□□□ -1.57
SMC5-202ENST00000471372 PPP1R16AQ96I34 528 aa5.26□□□□□ -1.57
SMC5-202ENST00000471372 C18orf12Q96KH6 178 aa5.26□□□□□ -1.57
SMC5-202ENST00000471372 MCHR1Q99705 422 aa5.26□□□□□ -1.57
SMC5-202ENST00000471372 OPRPNQ99935 248 aaPredicted RBP5.26□□□□□ -1.57
SMC5-202ENST00000471372 ZBP1Q9H171 429 aa5.26□□□□□ -1.57
SMC5-202ENST00000471372 GEMIN7Q9H840 131 aaKnown RBP5.26□□□□□ -1.57
SMC5-202ENST00000471372 NHEJ1Q9H9Q4 299 aaPredicted RBP5.26□□□□□ -1.57
SMC5-202ENST00000471372 B3GNT2Q9NY97 397 aa5.26□□□□□ -1.57
SMC5-202ENST00000471372 CHTOPQ9Y3Y2 248 aaKnown RBP5.26□□□□□ -1.57
SMC5-202ENST00000471372 TCRBV9S1A1TA0A576 114 aa5.25□□□□□ -1.57
SMC5-202ENST00000471372 FRG2CA6NGY1 282 aa5.25□□□□□ -1.57
SMC5-202ENST00000471372 C9JVG2 144 aa5.25□□□□□ -1.57
SMC5-202ENST00000471372 ZG16O60844 167 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms