RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 PPIAL4FP0DN26 164 aa0.72□□□□□ -2.29
UBXN4-207ENST00000471246 CLUP10909 449 aa0.72□□□□□ -2.29
UBXN4-207ENST00000471246 RNH1P13489 461 aaKnown RBP0.72□□□□□ -2.29
UBXN4-207ENST00000471246 ICAM2P13598 275 aa0.72□□□□□ -2.29
UBXN4-207ENST00000471246 ZNF14P17017 642 aaPredicted RBP0.72□□□□□ -2.29
UBXN4-207ENST00000471246 DPP4P27487 766 aa0.72□□□□□ -2.29
UBXN4-207ENST00000471246 HOXA9P31269 272 aa0.72□□□□□ -2.29
UBXN4-207ENST00000471246 LEPP41159 167 aa0.72□□□□□ -2.29
UBXN4-207ENST00000471246 MAGEA5P43359 124 aa0.72□□□□□ -2.29
UBXN4-207ENST00000471246 EFNB2P52799 333 aa0.72□□□□□ -2.29
UBXN4-207ENST00000471246 CRISP3P54108 245 aa0.72□□□□□ -2.29
UBXN4-207ENST00000471246 BIDP55957 195 aa0.72□□□□□ -2.29
UBXN4-207ENST00000471246 SLC26A5P58743 744 aa0.72□□□□□ -2.29
UBXN4-207ENST00000471246 ACTA2P62736 377 aa0.72□□□□□ -2.29
UBXN4-207ENST00000471246 ACTC1P68032 377 aa0.72□□□□□ -2.29
UBXN4-207ENST00000471246 RIPPLY1Q0D2K3 151 aa0.72□□□□□ -2.29
UBXN4-207ENST00000471246 RAB40BQ12829 278 aa0.72□□□□□ -2.29
UBXN4-207ENST00000471246 NRF1Q16656 503 aa0.72□□□□□ -2.29
UBXN4-207ENST00000471246 DEFB116Q30KQ4 102 aa0.72□□□□□ -2.29
UBXN4-207ENST00000471246 CCDC40Q4G0X9 1142 aa0.72□□□□□ -2.29
UBXN4-207ENST00000471246 C5orf47Q569G3 176 aa0.72□□□□□ -2.29
UBXN4-207ENST00000471246 LDLRAP1Q5SW96 308 aa0.72□□□□□ -2.29
UBXN4-207ENST00000471246 KPRPQ5T749 579 aaPredicted RBP0.72□□□□□ -2.29
UBXN4-207ENST00000471246 CTRB2Q6GPI1 263 aa0.72□□□□□ -2.29
UBXN4-207ENST00000471246 OR6B2Q6IFH4 312 aa0.72□□□□□ -2.29
UBXN4-207ENST00000471246 ZNF836Q6ZNA1 936 aa0.72□□□□□ -2.29
UBXN4-207ENST00000471246 APTXQ7Z2E3 356 aaKnown RBP0.72□□□□□ -2.29
UBXN4-207ENST00000471246 MIER3Q7Z3K6 550 aa0.72□□□□□ -2.29
UBXN4-207ENST00000471246 C6orf120Q7Z4R8 191 aa0.72□□□□□ -2.29
UBXN4-207ENST00000471246 TMEM17Q86X19 198 aa0.72□□□□□ -2.29
UBXN4-207ENST00000471246 TTC5Q8N0Z6 440 aa0.72□□□□□ -2.29
UBXN4-207ENST00000471246 C6orf223Q8N319 242 aa0.72□□□□□ -2.29
UBXN4-207ENST00000471246 RNF148Q8N7C7 305 aa0.72□□□□□ -2.29
UBXN4-207ENST00000471246 C15orf54Q8N8G6 183 aa0.72□□□□□ -2.29
UBXN4-207ENST00000471246 ZNF709Q8N972 641 aa0.72□□□□□ -2.29
UBXN4-207ENST00000471246 NPBQ8NG41 125 aa0.72□□□□□ -2.29
UBXN4-207ENST00000471246 OR5AU1Q8NGC0 362 aa0.72□□□□□ -2.29
UBXN4-207ENST00000471246 OR51G2Q8NGK0 314 aa0.72□□□□□ -2.29
UBXN4-207ENST00000471246 OR56B4Q8NH76 319 aa0.72□□□□□ -2.29
UBXN4-207ENST00000471246 FANK1Q8TC84 345 aa0.72□□□□□ -2.29
UBXN4-207ENST00000471246 NSMCE2Q96MF7 247 aa0.72□□□□□ -2.29
UBXN4-207ENST00000471246 VSTM2LQ96N03 204 aa0.72□□□□□ -2.29
UBXN4-207ENST00000471246 ZNF641Q96N77 438 aaPredicted RBP0.72□□□□□ -2.29
UBXN4-207ENST00000471246 ZNF2Q9BSG1 426 aaPredicted RBP0.72□□□□□ -2.29
UBXN4-207ENST00000471246 SPATA16Q9BXB7 569 aa0.72□□□□□ -2.29
UBXN4-207ENST00000471246 GPR61Q9BZJ8 451 aa0.72□□□□□ -2.29
UBXN4-207ENST00000471246 XPO4Q9C0E2 1151 aaKnown RBP0.72□□□□□ -2.29
UBXN4-207ENST00000471246 OR11A1Q9GZK7 315 aa0.72□□□□□ -2.29
UBXN4-207ENST00000471246 ATG10Q9H0Y0 220 aa0.72□□□□□ -2.29
UBXN4-207ENST00000471246 ZNF385DQ9H6B1 395 aa0.72□□□□□ -2.29
UBXN4-207ENST00000471246 ROPN1Q9HAT0 212 aaPredicted RBP0.72□□□□□ -2.29
UBXN4-207ENST00000471246 DMAP1Q9NPF5 467 aaPredicted RBP0.72□□□□□ -2.29
UBXN4-207ENST00000471246 INPP5EQ9NRR6 644 aa0.72□□□□□ -2.29
UBXN4-207ENST00000471246 ANO10Q9NW15 660 aa0.72□□□□□ -2.29
UBXN4-207ENST00000471246 CNOT2Q9NZN8 540 aaKnown RBP0.72□□□□□ -2.29
UBXN4-207ENST00000471246 WARS2Q9UGM6 360 aaKnown RBP0.72□□□□□ -2.29
UBXN4-207ENST00000471246 KIF25Q9UIL4 384 aa0.72□□□□□ -2.29
UBXN4-207ENST00000471246 GNPTGQ9UJJ9 305 aa0.72□□□□□ -2.29
UBXN4-207ENST00000471246 FOXJ3Q9UPW0 622 aa0.72□□□□□ -2.29
UBXN4-207ENST00000471246 RNF6Q9Y252 685 aa0.72□□□□□ -2.29
UBXN4-207ENST00000471246 TRAPPC4Q9Y296 219 aa0.72□□□□□ -2.29
UBXN4-207ENST00000471246 WIF1Q9Y5W5 379 aa0.72□□□□□ -2.29
UBXN4-207ENST00000471246 MAD1L1Q9Y6D9 718 aa0.72□□□□□ -2.29
UBXN4-207ENST00000471246 COL5A1P20908 1838 aaPredicted RBP0.72□□□□□ -2.29
UBXN4-207ENST00000471246 ABCC4O15439 1325 aa0.71□□□□□ -2.3
UBXN4-207ENST00000471246 KMT2BQ9UMN6 2715 aaPredicted RBP0.71□□□□□ -2.3
UBXN4-207ENST00000471246 A0A0G2JLM5 398 aa0.71□□□□□ -2.3
UBXN4-207ENST00000471246 A0A0U1RQS6 177 aa0.71□□□□□ -2.3
UBXN4-207ENST00000471246 A0A1B0GUL7 405 aa0.71□□□□□ -2.3
UBXN4-207ENST00000471246 FAM170AA1A519 330 aa0.71□□□□□ -2.3
UBXN4-207ENST00000471246 COLCA2A8K830 154 aa0.71□□□□□ -2.3
UBXN4-207ENST00000471246 DDX39AO00148 427 aaKnown RBP0.71□□□□□ -2.3
UBXN4-207ENST00000471246 LAD1O00515 517 aa0.71□□□□□ -2.3
UBXN4-207ENST00000471246 PRKYO43930 277 aa0.71□□□□□ -2.3
UBXN4-207ENST00000471246 JAK2O60674 1132 aa0.71□□□□□ -2.3
UBXN4-207ENST00000471246 KERAO60938 352 aa0.71□□□□□ -2.3
UBXN4-207ENST00000471246 OPN1LWP04000 364 aa0.71□□□□□ -2.3
UBXN4-207ENST00000471246 CA3P07451 260 aa0.71□□□□□ -2.3
UBXN4-207ENST00000471246 PNMA6AP0CW24 399 aaPredicted RBP0.71□□□□□ -2.3
UBXN4-207ENST00000471246 RRASP10301 218 aa0.71□□□□□ -2.3
UBXN4-207ENST00000471246 HNF1AP20823 631 aa0.71□□□□□ -2.3
UBXN4-207ENST00000471246 ATP6V1B2P21281 511 aa0.71□□□□□ -2.3
UBXN4-207ENST00000471246 PAICSP22234 425 aaKnown RBP0.71□□□□□ -2.3
UBXN4-207ENST00000471246 UQCRC2P22695 453 aa0.71□□□□□ -2.3
UBXN4-207ENST00000471246 PRKXP51817 358 aa0.71□□□□□ -2.3
UBXN4-207ENST00000471246 TGFBR3Q03167 851 aa0.71□□□□□ -2.3
UBXN4-207ENST00000471246 GABPB1Q06547 395 aaPredicted RBP0.71□□□□□ -2.3
UBXN4-207ENST00000471246 ZNF763Q0D2J5 394 aa0.71□□□□□ -2.3
UBXN4-207ENST00000471246 ARL6IP1Q15041 203 aa0.71□□□□□ -2.3
UBXN4-207ENST00000471246 MAPK6Q16659 721 aa0.71□□□□□ -2.3
UBXN4-207ENST00000471246 SLC5A12Q1EHB4 618 aa0.71□□□□□ -2.3
UBXN4-207ENST00000471246 LINC01620Q4KN68 170 aa0.71□□□□□ -2.3
UBXN4-207ENST00000471246 KLF17Q5JT82 389 aaPredicted RBP0.71□□□□□ -2.3
UBXN4-207ENST00000471246 LY6G6FQ5SQ64 297 aa0.71□□□□□ -2.3
UBXN4-207ENST00000471246 Q5W150 140 aa0.71□□□□□ -2.3
UBXN4-207ENST00000471246 ZSCAN25Q6NSZ9 544 aa0.71□□□□□ -2.3
UBXN4-207ENST00000471246 SLC25A34Q6PIV7 304 aa0.71□□□□□ -2.3
UBXN4-207ENST00000471246 ZNF621Q6ZSS3 439 aa0.71□□□□□ -2.3
UBXN4-207ENST00000471246 ACOT7LQ6ZUV0 252 aa0.71□□□□□ -2.3
UBXN4-207ENST00000471246 GDPD3Q7L5L3 318 aa0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms