RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 TCEA1P23193 301 aaKnown RBP13.47□□□□□ -0.25
CDC42SE1-203ENST00000470278 ME2P23368 584 aa13.47□□□□□ -0.25
CDC42SE1-203ENST00000470278 APOBEC1P41238 236 aaKnown RBP13.47□□□□□ -0.25
CDC42SE1-203ENST00000470278 IDH2P48735 452 aaKnown RBP13.47□□□□□ -0.25
CDC42SE1-203ENST00000470278 RASSF2P50749 326 aa13.47□□□□□ -0.25
CDC42SE1-203ENST00000470278 MAP2K6P52564 334 aa13.47□□□□□ -0.25
CDC42SE1-203ENST00000470278 CASP6P55212 293 aa13.47□□□□□ -0.25
CDC42SE1-203ENST00000470278 COPZ1P61923 177 aa13.47□□□□□ -0.25
CDC42SE1-203ENST00000470278 RAC1P63000 192 aa13.47□□□□□ -0.25
CDC42SE1-203ENST00000470278 SELENOWP63302 87 aa13.47□□□□□ -0.25
CDC42SE1-203ENST00000470278 GXYLT1Q4G148 440 aa13.47□□□□□ -0.25
CDC42SE1-203ENST00000470278 WBP2NLQ6ICG8 309 aa13.47□□□□□ -0.25
CDC42SE1-203ENST00000470278 C3orf33Q6P1S2 294 aa13.47□□□□□ -0.25
CDC42SE1-203ENST00000470278 PLEKHM3Q6ZWE6 761 aa13.47□□□□□ -0.25
CDC42SE1-203ENST00000470278 RANBP3LQ86VV4 465 aaPredicted RBP13.47□□□□□ -0.25
CDC42SE1-203ENST00000470278 DOLPP1Q86YN1 238 aa13.47□□□□□ -0.25
CDC42SE1-203ENST00000470278 EID3Q8N140 333 aa13.47□□□□□ -0.25
CDC42SE1-203ENST00000470278 FAM156AQ8NDB6 213 aa13.47□□□□□ -0.25
CDC42SE1-203ENST00000470278 OR5M1Q8NGP8 315 aa13.47□□□□□ -0.25
CDC42SE1-203ENST00000470278 BTBD10Q9BSF8 475 aa13.47□□□□□ -0.25
CDC42SE1-203ENST00000470278 PCDHAC1Q9H158 963 aa13.47□□□□□ -0.25
CDC42SE1-203ENST00000470278 TP63Q9H3D4 680 aaPredicted RBP13.47□□□□□ -0.25
CDC42SE1-203ENST00000470278 MUC13Q9H3R2 512 aa13.47□□□□□ -0.25
CDC42SE1-203ENST00000470278 PNPLA3Q9NST1 481 aa13.47□□□□□ -0.25
CDC42SE1-203ENST00000470278 ADPRHL2Q9NX46 363 aa13.47□□□□□ -0.25
CDC42SE1-203ENST00000470278 TNFRSF10DQ9UBN6 386 aa13.47□□□□□ -0.25
CDC42SE1-203ENST00000470278 EGFL7Q9UHF1 273 aa13.47□□□□□ -0.25
CDC42SE1-203ENST00000470278 OSGIN2Q9Y236 505 aa13.47□□□□□ -0.25
CDC42SE1-203ENST00000470278 SNX13Q9Y5W8 968 aa13.47□□□□□ -0.25
CDC42SE1-203ENST00000470278 MED12Q93074 2177 aa13.47□□□□□ -0.25
CDC42SE1-203ENST00000470278 GJE1A6NN92 205 aa13.46□□□□□ -0.25
CDC42SE1-203ENST00000470278 AHRRA9YTQ3 701 aa13.46□□□□□ -0.25
CDC42SE1-203ENST00000470278 H3BML4 177 aa13.46□□□□□ -0.25
CDC42SE1-203ENST00000470278 GYG2O15488 501 aa13.46□□□□□ -0.25
CDC42SE1-203ENST00000470278 ZNHIT1O43257 154 aa13.46□□□□□ -0.25
CDC42SE1-203ENST00000470278 HOXD4P09016 255 aaPredicted RBP13.46□□□□□ -0.25
CDC42SE1-203ENST00000470278 FKBP2P26885 142 aaKnown RBP13.46□□□□□ -0.25
CDC42SE1-203ENST00000470278 HTR2AP28223 471 aa13.46□□□□□ -0.25
CDC42SE1-203ENST00000470278 POLR2HP52434 150 aaKnown RBP13.46□□□□□ -0.25
CDC42SE1-203ENST00000470278 NCALDP61601 193 aa13.46□□□□□ -0.25
CDC42SE1-203ENST00000470278 MERTKQ12866 999 aa13.46□□□□□ -0.25
CDC42SE1-203ENST00000470278 C3AR1Q16581 482 aa13.46□□□□□ -0.25
CDC42SE1-203ENST00000470278 GLYATQ6IB77 296 aa13.46□□□□□ -0.25
CDC42SE1-203ENST00000470278 CBLL1Q75N03 491 aa13.46□□□□□ -0.25
CDC42SE1-203ENST00000470278 MAMDC2Q7Z304 686 aaPredicted RBP13.46□□□□□ -0.25
CDC42SE1-203ENST00000470278 GGNQ86UU5 652 aa13.46□□□□□ -0.25
CDC42SE1-203ENST00000470278 ULK2Q8IYT8 1036 aa13.46□□□□□ -0.25
CDC42SE1-203ENST00000470278 PRR7Q8TB68 274 aa13.46□□□□□ -0.25
CDC42SE1-203ENST00000470278 SLC25A43Q8WUT9 341 aaPredicted RBP13.46□□□□□ -0.25
CDC42SE1-203ENST00000470278 LZICQ8WZA0 190 aa13.46□□□□□ -0.25
CDC42SE1-203ENST00000470278 PROX1Q92786 737 aa13.46□□□□□ -0.25
CDC42SE1-203ENST00000470278 RELTQ969Z4 430 aa13.46□□□□□ -0.25
CDC42SE1-203ENST00000470278 ZNF559Q9BR84 538 aa13.46□□□□□ -0.25
CDC42SE1-203ENST00000470278 TRIM2Q9C040 744 aa13.46□□□□□ -0.25
CDC42SE1-203ENST00000470278 ADAM19Q9H013 955 aa13.46□□□□□ -0.25
CDC42SE1-203ENST00000470278 C12orf10Q9HB07 376 aa13.46□□□□□ -0.25
CDC42SE1-203ENST00000470278 CHRNA9Q9UGM1 479 aa13.46□□□□□ -0.25
CDC42SE1-203ENST00000470278 TINAGQ9UJW2 476 aa13.46□□□□□ -0.25
CDC42SE1-203ENST00000470278 PACSIN3Q9UKS6 424 aa13.46□□□□□ -0.25
CDC42SE1-203ENST00000470278 SLC9A8Q9Y2E8 581 aa13.46□□□□□ -0.25
CDC42SE1-203ENST00000470278 SPIN1Q9Y657 262 aaPredicted RBP13.46□□□□□ -0.25
CDC42SE1-203ENST00000470278 MYO7BQ6PIF6 2116 aa13.46□□□□□ -0.26
CDC42SE1-203ENST00000470278 A0A1B0GUH1 482 aa13.45□□□□□ -0.26
CDC42SE1-203ENST00000470278 E9PLN8 166 aa13.45□□□□□ -0.26
CDC42SE1-203ENST00000470278 M0R3H8 397 aa13.45□□□□□ -0.26
CDC42SE1-203ENST00000470278 ARPC2O15144 300 aa13.45□□□□□ -0.26
CDC42SE1-203ENST00000470278 ADAMDEC1O15204 470 aa13.45□□□□□ -0.26
CDC42SE1-203ENST00000470278 GMNNO75496 209 aa13.45□□□□□ -0.26
CDC42SE1-203ENST00000470278 SERPINA1P01009 418 aa13.45□□□□□ -0.26
CDC42SE1-203ENST00000470278 NCK1P16333 377 aa13.45□□□□□ -0.26
CDC42SE1-203ENST00000470278 TCN1P20061 433 aaPredicted RBP13.45□□□□□ -0.26
CDC42SE1-203ENST00000470278 IL11P20809 199 aa13.45□□□□□ -0.26
CDC42SE1-203ENST00000470278 ACVR2AP27037 513 aa13.45□□□□□ -0.26
CDC42SE1-203ENST00000470278 STARP49675 285 aa13.45□□□□□ -0.26
CDC42SE1-203ENST00000470278 SF3B4Q15427 424 aaKnown RBP eCLIP13.45□□□□□ -0.264e-7■■■□□ 16.7
CDC42SE1-203ENST00000470278 NPTX1Q15818 432 aa13.45□□□□□ -0.26
CDC42SE1-203ENST00000470278 CTU2Q2VPK5 515 aaKnown RBP13.45□□□□□ -0.26
CDC42SE1-203ENST00000470278 ACSF3Q4G176 576 aaPredicted RBP13.45□□□□□ -0.26
CDC42SE1-203ENST00000470278 SWT1Q5T5J6 900 aaKnown RBP13.45□□□□□ -0.26
CDC42SE1-203ENST00000470278 ESPNLQ6ZVH7 1005 aa13.45□□□□□ -0.26
CDC42SE1-203ENST00000470278 ADGRE4PQ86SQ3 457 aa13.45□□□□□ -0.26
CDC42SE1-203ENST00000470278 LILRA2Q8N149 483 aa13.45□□□□□ -0.26
CDC42SE1-203ENST00000470278 MEIOBQ8N635 442 aa13.45□□□□□ -0.26
CDC42SE1-203ENST00000470278 OR6T1Q8NGN1 323 aa13.45□□□□□ -0.26
CDC42SE1-203ENST00000470278 OR5M9Q8NGP3 310 aa13.45□□□□□ -0.26
CDC42SE1-203ENST00000470278 ZPLD1Q8TCW7 415 aa13.45□□□□□ -0.26
CDC42SE1-203ENST00000470278 FAM162AQ96A26 154 aa13.45□□□□□ -0.26
CDC42SE1-203ENST00000470278 C3orf49Q96BT1 292 aa13.45□□□□□ -0.26
CDC42SE1-203ENST00000470278 ADGRG7Q96K78 797 aa13.45□□□□□ -0.26
CDC42SE1-203ENST00000470278 UCN2Q96RP3 112 aa13.45□□□□□ -0.26
CDC42SE1-203ENST00000470278 VKORC1Q9BQB6 163 aa13.45□□□□□ -0.26
CDC42SE1-203ENST00000470278 WFDC6Q9BQY6 131 aa13.45□□□□□ -0.26
CDC42SE1-203ENST00000470278 DCAF13Q9NV06 445 aaKnown RBP13.45□□□□□ -0.26
CDC42SE1-203ENST00000470278 ACTR3BQ9P1U1 418 aa13.45□□□□□ -0.26
CDC42SE1-203ENST00000470278 OSGIN1Q9UJX0 560 aa13.45□□□□□ -0.26
CDC42SE1-203ENST00000470278 RPS6KA6Q9UK32 745 aa13.45□□□□□ -0.26
CDC42SE1-203ENST00000470278 SAMD4AQ9UPU9 718 aaKnown RBP13.45□□□□□ -0.26
CDC42SE1-203ENST00000470278 F8P00451 2351 aa13.45□□□□□ -0.26
CDC42SE1-203ENST00000470278 PKDREJQ9NTG1 2253 aa13.44□□□□□ -0.26
CDC42SE1-203ENST00000470278 TRGV8A0A0C4DH27 118 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms