RNA–Protein interactions for RNA: ENST00000465003.5

APTX-213, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,991 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-213ENST00000465003 ACTL6AO96019 429 aa10.69□□□□□ -0.7
APTX-213ENST00000465003 SERPINA1P01009 418 aa10.69□□□□□ -0.7
APTX-213ENST00000465003 CHMP24386 653 aa10.69□□□□□ -0.7
APTX-213ENST00000465003 ACVR2AP27037 513 aa10.69□□□□□ -0.7
APTX-213ENST00000465003 YAP1P46937 504 aaKnown RBP10.69□□□□□ -0.7
APTX-213ENST00000465003 KCNJ5P48544 419 aa10.69□□□□□ -0.7
APTX-213ENST00000465003 PMPCAQ10713 525 aa10.69□□□□□ -0.7
APTX-213ENST00000465003 VEZF1Q14119 521 aa10.69□□□□□ -0.7
APTX-213ENST00000465003 CTU2Q2VPK5 515 aaKnown RBP10.69□□□□□ -0.7
APTX-213ENST00000465003 ACSF3Q4G176 576 aaPredicted RBP10.69□□□□□ -0.7
APTX-213ENST00000465003 ERICH5Q6P6B1 374 aa10.69□□□□□ -0.7
APTX-213ENST00000465003 DHRS4L2Q6PKH6 230 aa10.69□□□□□ -0.7
APTX-213ENST00000465003 PLEKHM3Q6ZWE6 761 aa10.69□□□□□ -0.7
APTX-213ENST00000465003 PATL1Q86TB9 770 aaKnown RBP10.69□□□□□ -0.7
APTX-213ENST00000465003 GCNT2Q8N0V5 402 aa10.69□□□□□ -0.7
APTX-213ENST00000465003 FAM162AQ96A26 154 aa10.69□□□□□ -0.7
APTX-213ENST00000465003 SLC7A6OSQ96CW6 309 aaPredicted RBP10.69□□□□□ -0.7
APTX-213ENST00000465003 ARL5BQ96KC2 179 aa10.69□□□□□ -0.7
APTX-213ENST00000465003 PRDM14Q9GZV8 571 aa10.69□□□□□ -0.7
APTX-213ENST00000465003 OSGIN1Q9UJX0 560 aa10.69□□□□□ -0.7
APTX-213ENST00000465003 SLC13A4Q9UKG4 626 aa10.69□□□□□ -0.7
APTX-213ENST00000465003 MEMO1Q9Y316 297 aa10.69□□□□□ -0.7
APTX-213ENST00000465003 MRPS18CQ9Y3D5 142 aaKnown RBP10.69□□□□□ -0.7
APTX-213ENST00000465003 ARHGAP21Q5T5U3 1957 aa10.69□□□□□ -0.7
APTX-213ENST00000465003 A0A087WZY1 265 aa10.68□□□□□ -0.7
APTX-213ENST00000465003 IGHV3-15A0A0B4J1V0 119 aa10.68□□□□□ -0.7
APTX-213ENST00000465003 TMEM72A0PK05 275 aa10.68□□□□□ -0.7
APTX-213ENST00000465003 FIGNL2A6NMB9 653 aa10.68□□□□□ -0.7
APTX-213ENST00000465003 CLCA1A8K7I4 914 aa10.68□□□□□ -0.7
APTX-213ENST00000465003 TOXO94900 526 aa10.68□□□□□ -0.7
APTX-213ENST00000465003 GP1BBP13224 206 aa10.68□□□□□ -0.7
APTX-213ENST00000465003 ZNF17P17021 662 aa10.68□□□□□ -0.7
APTX-213ENST00000465003 GGT1P19440 569 aa10.68□□□□□ -0.7
APTX-213ENST00000465003 ME2P23368 584 aa10.68□□□□□ -0.7
APTX-213ENST00000465003 GCKP35557 465 aa10.68□□□□□ -0.7
APTX-213ENST00000465003 CASP6P55212 293 aa10.68□□□□□ -0.7
APTX-213ENST00000465003 ADORA2A-AS1P86434 159 aa10.68□□□□□ -0.7
APTX-213ENST00000465003 KCNC4Q03721 635 aa10.68□□□□□ -0.7
APTX-213ENST00000465003 GLYATQ6IB77 296 aa10.68□□□□□ -0.7
APTX-213ENST00000465003 CYP2R1Q6VVX0 501 aa10.68□□□□□ -0.7
APTX-213ENST00000465003 DEF8Q6ZN54 512 aa10.68□□□□□ -0.7
APTX-213ENST00000465003 CCDC80Q76M96 950 aa10.68□□□□□ -0.7
APTX-213ENST00000465003 ADGRG3Q86Y34 549 aa10.68□□□□□ -0.7
APTX-213ENST00000465003 GRAMD2AQ8IUY3 354 aa10.68□□□□□ -0.7
APTX-213ENST00000465003 NAXEQ8NCW5 288 aa10.68□□□□□ -0.7
APTX-213ENST00000465003 PMM1Q92871 262 aa10.68□□□□□ -0.7
APTX-213ENST00000465003 MRGPRX4Q96LA9 322 aa10.68□□□□□ -0.7
APTX-213ENST00000465003 THTPAQ9BU02 230 aa10.68□□□□□ -0.7
APTX-213ENST00000465003 TP63Q9H3D4 680 aaPredicted RBP10.68□□□□□ -0.7
APTX-213ENST00000465003 CD300AQ9UGN4 299 aa10.68□□□□□ -0.7
APTX-213ENST00000465003 PHF3Q92576 2039 aaKnown RBP10.68□□□□□ -0.7
APTX-213ENST00000465003 CXCL13O43927 109 aa10.68□□□□□ -0.7
APTX-213ENST00000465003 TGM6O95932 706 aa10.68□□□□□ -0.7
APTX-213ENST00000465003 LGI1O95970 557 aa10.68□□□□□ -0.7
APTX-213ENST00000465003 SLC6A8P48029 635 aa10.68□□□□□ -0.7
APTX-213ENST00000465003 NUP107P57740 925 aa10.68□□□□□ -0.7
APTX-213ENST00000465003 NCALDP61601 193 aa10.68□□□□□ -0.7
APTX-213ENST00000465003 PON3Q15166 354 aa10.68□□□□□ -0.7
APTX-213ENST00000465003 C4orf17Q53FE4 359 aa10.68□□□□□ -0.7
APTX-213ENST00000465003 SAMD4BQ5PRF9 694 aaKnown RBP10.68□□□□□ -0.7
APTX-213ENST00000465003 B3GNT6Q6ZMB0 384 aa10.68□□□□□ -0.7
APTX-213ENST00000465003 ZNF550Q7Z398 422 aa10.68□□□□□ -0.7
APTX-213ENST00000465003 CARM1Q86X55 608 aa10.68□□□□□ -0.7
APTX-213ENST00000465003 CCDC71Q8IV32 467 aaPredicted RBP10.68□□□□□ -0.7
APTX-213ENST00000465003 TNIP2Q8NFZ5 429 aa10.68□□□□□ -0.7
APTX-213ENST00000465003 OR10D3Q8NH80 312 aa10.68□□□□□ -0.7
APTX-213ENST00000465003 FNDC9Q8TBE3 224 aa10.68□□□□□ -0.7
APTX-213ENST00000465003 ST8SIA1Q92185 356 aa10.68□□□□□ -0.7
APTX-213ENST00000465003 C3orf49Q96BT1 292 aa10.68□□□□□ -0.7
APTX-213ENST00000465003 OR5B2Q96R09 309 aa10.68□□□□□ -0.7
APTX-213ENST00000465003 TTYH2Q9BSA4 534 aa10.68□□□□□ -0.7
APTX-213ENST00000465003 SRXN1Q9BYN0 137 aa10.68□□□□□ -0.7
APTX-213ENST00000465003 ARMC7Q9H6L4 198 aa10.68□□□□□ -0.7
APTX-213ENST00000465003 ACER3Q9NUN7 267 aa10.68□□□□□ -0.7
APTX-213ENST00000465003 MED12LQ86YW9 2145 aa10.68□□□□□ -0.7
APTX-213ENST00000465003 TMED7-TICAM2A0A0A6YYA0 188 aa10.67□□□□□ -0.7
APTX-213ENST00000465003 A0A1B0GWA3 101 aa10.67□□□□□ -0.7
APTX-213ENST00000465003 J3KTA2 159 aa10.67□□□□□ -0.7
APTX-213ENST00000465003 ARPC2O15144 300 aa10.67□□□□□ -0.7
APTX-213ENST00000465003 TFPIP10646 304 aa10.67□□□□□ -0.7
APTX-213ENST00000465003 EIF1P41567 113 aaKnown RBP10.67□□□□□ -0.7
APTX-213ENST00000465003 SLC1A3P43003 542 aa10.67□□□□□ -0.7
APTX-213ENST00000465003 COPZ1P61923 177 aa10.67□□□□□ -0.7
APTX-213ENST00000465003 RAC1P63000 192 aa10.67□□□□□ -0.7
APTX-213ENST00000465003 BNIP1Q12981 228 aa10.67□□□□□ -0.7
APTX-213ENST00000465003 SGCBQ16585 318 aa10.67□□□□□ -0.7
APTX-213ENST00000465003 NRF1Q16656 503 aa10.67□□□□□ -0.7
APTX-213ENST00000465003 C1orf185Q5T7R7 199 aa10.67□□□□□ -0.7
APTX-213ENST00000465003 C3orf33Q6P1S2 294 aa10.67□□□□□ -0.7
APTX-213ENST00000465003 C6orf89Q6UWU4 347 aa10.67□□□□□ -0.7
APTX-213ENST00000465003 GRINAQ7Z429 371 aa10.67□□□□□ -0.7
APTX-213ENST00000465003 SLC30A8Q8IWU4 369 aa10.67□□□□□ -0.7
APTX-213ENST00000465003 C9orf106Q8NAJ2 232 aa10.67□□□□□ -0.7
APTX-213ENST00000465003 OR52E4Q8NGH9 312 aa10.67□□□□□ -0.7
APTX-213ENST00000465003 OIT3Q8WWZ8 545 aa10.67□□□□□ -0.7
APTX-213ENST00000465003 TMEM234Q8WY98 164 aa10.67□□□□□ -0.7
APTX-213ENST00000465003 PROX1Q92786 737 aa10.67□□□□□ -0.7
APTX-213ENST00000465003 HSH2DQ96JZ2 352 aa10.67□□□□□ -0.7
APTX-213ENST00000465003 KLHL15Q96M94 604 aa10.67□□□□□ -0.7
APTX-213ENST00000465003 DOCK7Q96N67 2140 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms