RNA–Protein interactions for RNA: ENST00000463685.1

ABCF3-204, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-204ENST00000463685 UBQLN3Q9H347 655 aa13.58□□□□□ -0.24
ABCF3-204ENST00000463685 DCLRE1BQ9H816 532 aa13.58□□□□□ -0.24
ABCF3-204ENST00000463685 REEP1Q9H902 201 aa13.58□□□□□ -0.24
ABCF3-204ENST00000463685 HHATLQ9HCP6 504 aa13.58□□□□□ -0.24
ABCF3-204ENST00000463685 OSGIN1Q9UJX0 560 aa13.58□□□□□ -0.24
ABCF3-204ENST00000463685 PCDHGB6Q9Y5F9 930 aa13.58□□□□□ -0.24
ABCF3-204ENST00000463685 MED12Q93074 2177 aa13.58□□□□□ -0.24
ABCF3-204ENST00000463685 USP24Q9UPU5 2620 aa13.58□□□□□ -0.24
ABCF3-204ENST00000463685 FREM3P0C091 2139 aa13.57□□□□□ -0.24
ABCF3-204ENST00000463685 A0A087WZY1 265 aa13.57□□□□□ -0.24
ABCF3-204ENST00000463685 TMED7-TICAM2A0A0A6YYA0 188 aa13.57□□□□□ -0.24
ABCF3-204ENST00000463685 SAC3D1A6NKF1 404 aa13.57□□□□□ -0.24
ABCF3-204ENST00000463685 EFNA2O43921 213 aa13.57□□□□□ -0.24
ABCF3-204ENST00000463685 WISP2O76076 250 aa13.57□□□□□ -0.24
ABCF3-204ENST00000463685 GADD45GO95257 159 aa13.57□□□□□ -0.24
ABCF3-204ENST00000463685 OPN1LWP04000 364 aa13.57□□□□□ -0.24
ABCF3-204ENST00000463685 SRD5A2P31213 254 aa13.57□□□□□ -0.24
ABCF3-204ENST00000463685 TRAM2Q15035 370 aa13.57□□□□□ -0.24
ABCF3-204ENST00000463685 WIPI1Q5MNZ9 446 aaPredicted RBP13.57□□□□□ -0.24
ABCF3-204ENST00000463685 RAET1LQ5VY80 246 aa13.57□□□□□ -0.24
ABCF3-204ENST00000463685 PODNL1Q6PEZ8 512 aa13.57□□□□□ -0.24
ABCF3-204ENST00000463685 ATG4DQ86TL0 474 aaPredicted RBP13.57□□□□□ -0.24
ABCF3-204ENST00000463685 ICA1LQ8NDH6 482 aa13.57□□□□□ -0.24
ABCF3-204ENST00000463685 ATP6V1C2Q8NEY4 427 aa13.57□□□□□ -0.24
ABCF3-204ENST00000463685 OR4C15Q8NGM1 316 aa13.57□□□□□ -0.24
ABCF3-204ENST00000463685 OR14L1PQ8NHC6 308 aa13.57□□□□□ -0.24
ABCF3-204ENST00000463685 TMEM255BQ8WV15 326 aa13.57□□□□□ -0.24
ABCF3-204ENST00000463685 TMEM234Q8WY98 164 aa13.57□□□□□ -0.24
ABCF3-204ENST00000463685 ST8SIA1Q92185 356 aa13.57□□□□□ -0.24
ABCF3-204ENST00000463685 DNAJA3Q96EY1 480 aa13.57□□□□□ -0.24
ABCF3-204ENST00000463685 TAAR6Q96RI8 345 aa13.57□□□□□ -0.24
ABCF3-204ENST00000463685 POLR2J2Q9GZM3 115 aaKnown RBP13.57□□□□□ -0.24
ABCF3-204ENST00000463685 POLR2J3Q9H1A7 115 aaKnown RBP13.57□□□□□ -0.24
ABCF3-204ENST00000463685 DEFB127Q9H1M4 99 aa13.57□□□□□ -0.24
ABCF3-204ENST00000463685 RNPEPL1Q9HAU8 725 aa13.57□□□□□ -0.24
ABCF3-204ENST00000463685 SELENONQ9NZV5 590 aa13.57□□□□□ -0.24
ABCF3-204ENST00000463685 B4GALT7Q9UBV7 327 aa13.57□□□□□ -0.24
ABCF3-204ENST00000463685 TUBD1Q9UJT1 453 aa13.57□□□□□ -0.24
ABCF3-204ENST00000463685 TMED7Q9Y3B3 224 aa13.57□□□□□ -0.24
ABCF3-204ENST00000463685 MAGED1Q9Y5V3 778 aaPredicted RBP13.57□□□□□ -0.24
ABCF3-204ENST00000463685 LYVE1Q9Y5Y7 322 aa13.57□□□□□ -0.24
ABCF3-204ENST00000463685 SPENQ96T58 3664 aaKnown RBP13.56□□□□□ -0.24
ABCF3-204ENST00000463685 TMEM72A0PK05 275 aa13.56□□□□□ -0.24
ABCF3-204ENST00000463685 ELOA3DA6NLF2 546 aaPredicted RBP13.56□□□□□ -0.24
ABCF3-204ENST00000463685 ADAMDEC1O15204 470 aa13.56□□□□□ -0.24
ABCF3-204ENST00000463685 CHP2O43745 196 aa13.56□□□□□ -0.24
ABCF3-204ENST00000463685 PIP5K1CO60331 668 aa13.56□□□□□ -0.24
ABCF3-204ENST00000463685 E2F6O75461 281 aa13.56□□□□□ -0.24
ABCF3-204ENST00000463685 RASAL1O95294 804 aa13.56□□□□□ -0.24
ABCF3-204ENST00000463685 POLR2HP52434 150 aaKnown RBP13.56□□□□□ -0.24
ABCF3-204ENST00000463685 B3GALT5-AS1P59052 145 aa13.56□□□□□ -0.24
ABCF3-204ENST00000463685 ST3GAL3Q11203 375 aa13.56□□□□□ -0.24
ABCF3-204ENST00000463685 RIPK1Q13546 671 aa13.56□□□□□ -0.24
ABCF3-204ENST00000463685 LY6DQ14210 128 aa13.56□□□□□ -0.24
ABCF3-204ENST00000463685 TMEM44Q2T9K0 475 aa13.56□□□□□ -0.24
ABCF3-204ENST00000463685 ELOA3BQ3SY89 546 aa13.56□□□□□ -0.24
ABCF3-204ENST00000463685 SLC25A53Q5H9E4 307 aa13.56□□□□□ -0.24
ABCF3-204ENST00000463685 ANKRD34AQ69YU3 496 aa13.56□□□□□ -0.24
ABCF3-204ENST00000463685 ULK3Q6PHR2 472 aa13.56□□□□□ -0.24
ABCF3-204ENST00000463685 PCSK4Q6UW60 755 aa13.56□□□□□ -0.24
ABCF3-204ENST00000463685 GRINAQ7Z429 371 aa13.56□□□□□ -0.24
ABCF3-204ENST00000463685 SLC22A16Q86VW1 577 aa13.56□□□□□ -0.24
ABCF3-204ENST00000463685 ADGRG3Q86Y34 549 aa13.56□□□□□ -0.24
ABCF3-204ENST00000463685 FAM98AQ8NCA5 519 aaKnown RBP13.56□□□□□ -0.24
ABCF3-204ENST00000463685 ELOA3Q8NG57 546 aa13.56□□□□□ -0.24
ABCF3-204ENST00000463685 SLC7A13Q8TCU3 470 aa13.56□□□□□ -0.24
ABCF3-204ENST00000463685 DNAJA4Q8WW22 397 aaPredicted RBP13.56□□□□□ -0.24
ABCF3-204ENST00000463685 NR4A3Q92570 626 aa13.56□□□□□ -0.24
ABCF3-204ENST00000463685 CENPNQ96H22 339 aaPredicted RBP13.56□□□□□ -0.24
ABCF3-204ENST00000463685 ALPK1Q96QP1 1244 aa13.56□□□□□ -0.24
ABCF3-204ENST00000463685 FUZQ9BT04 418 aa13.56□□□□□ -0.24
ABCF3-204ENST00000463685 OR2B2Q9GZK3 357 aa13.56□□□□□ -0.24
ABCF3-204ENST00000463685 SLC6A15Q9H2J7 730 aa13.56□□□□□ -0.24
ABCF3-204ENST00000463685 TMEM185BQ9H7F4 350 aa13.56□□□□□ -0.24
ABCF3-204ENST00000463685 STX18Q9P2W9 335 aaKnown RBP13.56□□□□□ -0.24
ABCF3-204ENST00000463685 SLC6A5Q9Y345 797 aa13.56□□□□□ -0.24
ABCF3-204ENST00000463685 LIPGQ9Y5X9 500 aa13.56□□□□□ -0.24
ABCF3-204ENST00000463685 NBEAQ8NFP9 2946 aa13.55□□□□□ -0.24
ABCF3-204ENST00000463685 IGKV1D-42A0A075B6H8 117 aa13.55□□□□□ -0.24
ABCF3-204ENST00000463685 A0A087WUJ7 227 aa13.55□□□□□ -0.24
ABCF3-204ENST00000463685 A0A087WUU8 490 aa13.55□□□□□ -0.24
ABCF3-204ENST00000463685 A0A1W2PRQ8 180 aa13.55□□□□□ -0.24
ABCF3-204ENST00000463685 OR2M5A3KFT3 312 aa13.55□□□□□ -0.24
ABCF3-204ENST00000463685 ETV2O00321 342 aaPredicted RBP13.55□□□□□ -0.24
ABCF3-204ENST00000463685 KPNA4O00629 521 aaPredicted RBP13.55□□□□□ -0.24
ABCF3-204ENST00000463685 TFECO14948 347 aaPredicted RBP13.55□□□□□ -0.24
ABCF3-204ENST00000463685 SUSD5O60279 629 aa13.55□□□□□ -0.24
ABCF3-204ENST00000463685 PEPDP12955 493 aa13.55□□□□□ -0.24
ABCF3-204ENST00000463685 CXCR1P25024 350 aa13.55□□□□□ -0.24
ABCF3-204ENST00000463685 SHC1P29353 583 aa13.55□□□□□ -0.24
ABCF3-204ENST00000463685 IFNA8P32881 189 aa13.55□□□□□ -0.24
ABCF3-204ENST00000463685 LIMS1P48059 325 aa13.55□□□□□ -0.24
ABCF3-204ENST00000463685 UGT2B15P54855 530 aa13.55□□□□□ -0.24
ABCF3-204ENST00000463685 DLX5P56178 289 aa13.55□□□□□ -0.24
ABCF3-204ENST00000463685 SMIM11AP58511 58 aa13.55□□□□□ -0.24
ABCF3-204ENST00000463685 DGCR6Q14129 220 aa13.55□□□□□ -0.24
ABCF3-204ENST00000463685 HYAL4Q2M3T9 481 aa13.55□□□□□ -0.24
ABCF3-204ENST00000463685 ZNF730Q6ZMV8 503 aa13.55□□□□□ -0.24
ABCF3-204ENST00000463685 GTPBP8Q8N3Z3 284 aaPredicted RBP13.55□□□□□ -0.24
ABCF3-204ENST00000463685 Q8NA96 180 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms