RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 BRIX1Q8TDN6 353 aaKnown RBP9.13□□□□□ -0.95
PTPRD-207ENST00000463477 CHAC2Q8WUX2 184 aa9.13□□□□□ -0.95
PTPRD-207ENST00000463477 CTHRC1Q96CG8 243 aa9.13□□□□□ -0.95
PTPRD-207ENST00000463477 ZNF285Q96NJ3 590 aa9.13□□□□□ -0.95
PTPRD-207ENST00000463477 ARMC7Q9H6L4 198 aa9.13□□□□□ -0.95
PTPRD-207ENST00000463477 AKIRIN1Q9H9L7 192 aaPredicted RBP9.13□□□□□ -0.95
PTPRD-207ENST00000463477 SMURF1Q9HCE7 757 aa9.13□□□□□ -0.95
PTPRD-207ENST00000463477 EXOGQ9Y2C4 368 aaKnown RBP9.13□□□□□ -0.95
PTPRD-207ENST00000463477 PCDHGB6Q9Y5F9 930 aa9.13□□□□□ -0.95
PTPRD-207ENST00000463477 TRAPPC13A5PLN9 417 aa9.12□□□□□ -0.95
PTPRD-207ENST00000463477 BOLA2-SMG1P6H3BVE0 249 aa9.12□□□□□ -0.95
PTPRD-207ENST00000463477 CYR61O00622 381 aa9.12□□□□□ -0.95
PTPRD-207ENST00000463477 SURF4O15260 269 aa9.12□□□□□ -0.95
PTPRD-207ENST00000463477 GALR3O60755 368 aaPredicted RBP9.12□□□□□ -0.95
PTPRD-207ENST00000463477 IGHA1P01876 353 aa9.12□□□□□ -0.95
PTPRD-207ENST00000463477 THY1P04216 161 aa9.12□□□□□ -0.95
PTPRD-207ENST00000463477 NID1P14543 1247 aa9.12□□□□□ -0.95
PTPRD-207ENST00000463477 GALP22466 123 aa9.12□□□□□ -0.95
PTPRD-207ENST00000463477 F8A1P23610 371 aa9.12□□□□□ -0.95
PTPRD-207ENST00000463477 FGF9P31371 208 aaPredicted RBP9.12□□□□□ -0.95
PTPRD-207ENST00000463477 RPS19P39019 145 aaKnown RBP9.12□□□□□ -0.95
PTPRD-207ENST00000463477 SOX3P41225 446 aa9.12□□□□□ -0.95
PTPRD-207ENST00000463477 AVPR1BP47901 424 aa9.12□□□□□ -0.95
PTPRD-207ENST00000463477 ETV1P50549 477 aa9.12□□□□□ -0.95
PTPRD-207ENST00000463477 DEFA1P59665 94 aa9.12□□□□□ -0.95
PTPRD-207ENST00000463477 DEFA3P59666 94 aa9.12□□□□□ -0.95
PTPRD-207ENST00000463477 LSM11P83369 360 aaKnown RBP eCLIP9.12□□□□□ -0.95
PTPRD-207ENST00000463477 FOXD4Q12950 439 aaPredicted RBP9.12□□□□□ -0.95
PTPRD-207ENST00000463477 ZSWIM7Q19AV6 140 aa9.12□□□□□ -0.95
PTPRD-207ENST00000463477 PGGHGQ32M88 737 aa9.12□□□□□ -0.95
PTPRD-207ENST00000463477 TCTE1Q5JU00 501 aa9.12□□□□□ -0.95
PTPRD-207ENST00000463477 ARMC4Q5T2S8 1044 aa9.12□□□□□ -0.95
PTPRD-207ENST00000463477 NXNL2Q5VZ03 156 aa9.12□□□□□ -0.95
PTPRD-207ENST00000463477 STEAP3Q658P3 488 aa9.12□□□□□ -0.95
PTPRD-207ENST00000463477 RHBDD2Q6NTF9 364 aa9.12□□□□□ -0.95
PTPRD-207ENST00000463477 RPL13AP3Q6NVV1 102 aa9.12□□□□□ -0.95
PTPRD-207ENST00000463477 CD200R1LQ6Q8B3 271 aa9.12□□□□□ -0.95
PTPRD-207ENST00000463477 LAPTM4BQ86VI4 370 aa9.12□□□□□ -0.95
PTPRD-207ENST00000463477 NKAIN4Q8IVV8 208 aa9.12□□□□□ -0.95
PTPRD-207ENST00000463477 CADM3Q8N126 398 aa9.12□□□□□ -0.95
PTPRD-207ENST00000463477 SLC43A2Q8N370 569 aa9.12□□□□□ -0.95
PTPRD-207ENST00000463477 LSM14AQ8ND56 463 aaKnown RBP9.12□□□□□ -0.95
PTPRD-207ENST00000463477 SETD6Q8TBK2 473 aa9.12□□□□□ -0.95
PTPRD-207ENST00000463477 ZCCHC10Q8TBK6 192 aa9.12□□□□□ -0.95
PTPRD-207ENST00000463477 SLC9A6Q92581 669 aa9.12□□□□□ -0.95
PTPRD-207ENST00000463477 SLC35B4Q969S0 331 aa9.12□□□□□ -0.95
PTPRD-207ENST00000463477 CLIP3Q96DZ5 547 aa9.12□□□□□ -0.95
PTPRD-207ENST00000463477 RNFT2Q96EX2 444 aa9.12□□□□□ -0.95
PTPRD-207ENST00000463477 FAM46AQ96IP4 442 aaKnown RBP9.12□□□□□ -0.95
PTPRD-207ENST00000463477 SLC30A2Q9BRI3 323 aa9.12□□□□□ -0.95
PTPRD-207ENST00000463477 ARHGAP9Q9BRR9 750 aa9.12□□□□□ -0.95
PTPRD-207ENST00000463477 GPR87Q9BY21 358 aa9.12□□□□□ -0.95
PTPRD-207ENST00000463477 SPRTNQ9H040 489 aaPredicted RBP9.12□□□□□ -0.95
PTPRD-207ENST00000463477 FN3KQ9H479 309 aa9.12□□□□□ -0.95
PTPRD-207ENST00000463477 C14orf105Q9NVL8 296 aa9.12□□□□□ -0.95
PTPRD-207ENST00000463477 QPCTLQ9NXS2 382 aa9.12□□□□□ -0.95
PTPRD-207ENST00000463477 IL17BQ9UHF5 180 aa9.12□□□□□ -0.95
PTPRD-207ENST00000463477 SF3B6Q9Y3B4 125 aaKnown RBP9.12□□□□□ -0.95
PTPRD-207ENST00000463477 IGSF10Q6WRI0 2623 aa9.12□□□□□ -0.95
PTPRD-207ENST00000463477 LOC105369274A0A096LPK9 316 aa9.11□□□□□ -0.95
PTPRD-207ENST00000463477 LOC102723532A0A0G2JNH3 316 aa9.11□□□□□ -0.95
PTPRD-207ENST00000463477 BLACEA4D250 179 aa9.11□□□□□ -0.95
PTPRD-207ENST00000463477 FITM1A5D6W6 292 aa9.11□□□□□ -0.95
PTPRD-207ENST00000463477 CDHR4A6H8M9 788 aa9.11□□□□□ -0.95
PTPRD-207ENST00000463477 ZNF891A8MT65 544 aaPredicted RBP9.11□□□□□ -0.95
PTPRD-207ENST00000463477 TBX1O43435 398 aa9.11□□□□□ -0.95
PTPRD-207ENST00000463477 FRS3O43559 492 aa9.11□□□□□ -0.95
PTPRD-207ENST00000463477 CTSBP07858 339 aa9.11□□□□□ -0.95
PTPRD-207ENST00000463477 LIMS3P0CW19 117 aa9.11□□□□□ -0.95
PTPRD-207ENST00000463477 LIMS4P0CW20 117 aa9.11□□□□□ -0.95
PTPRD-207ENST00000463477 HTR1FP30939 366 aa9.11□□□□□ -0.95
PTPRD-207ENST00000463477 DLSTP36957 453 aa9.11□□□□□ -0.95
PTPRD-207ENST00000463477 GCGRP47871 477 aa9.11□□□□□ -0.95
PTPRD-207ENST00000463477 RAB38P57729 211 aa9.11□□□□□ -0.95
PTPRD-207ENST00000463477 SNRPNP63162 240 aaKnown RBP9.11□□□□□ -0.95
PTPRD-207ENST00000463477 MGAT2Q10469 447 aa9.11□□□□□ -0.95
PTPRD-207ENST00000463477 DSG2Q14126 1118 aa9.11□□□□□ -0.95
PTPRD-207ENST00000463477 PRICKLE4Q2TBC4 344 aa9.11□□□□□ -0.95
PTPRD-207ENST00000463477 DEFB110Q30KQ9 67 aa9.11□□□□□ -0.95
PTPRD-207ENST00000463477 DCST2Q5T1A1 773 aa9.11□□□□□ -0.95
PTPRD-207ENST00000463477 YOD1Q5VVQ6 348 aaPredicted RBP9.11□□□□□ -0.95
PTPRD-207ENST00000463477 ZNF385CQ66K41 422 aaPredicted RBP9.11□□□□□ -0.95
PTPRD-207ENST00000463477 FAM199XQ6PEV8 388 aaPredicted RBP9.11□□□□□ -0.95
PTPRD-207ENST00000463477 BCDIN3DQ7Z5W3 292 aaKnown RBP9.11□□□□□ -0.95
PTPRD-207ENST00000463477 GRAMD2AQ8IUY3 354 aa9.11□□□□□ -0.95
PTPRD-207ENST00000463477 OR4N4Q8N0Y3 316 aa9.11□□□□□ -0.95
PTPRD-207ENST00000463477 CA13Q8N1Q1 262 aa9.11□□□□□ -0.95
PTPRD-207ENST00000463477 OR4Q3Q8NH05 313 aa9.11□□□□□ -0.95
PTPRD-207ENST00000463477 OR52N1Q8NH53 320 aa9.11□□□□□ -0.95
PTPRD-207ENST00000463477 SLC25A46Q96AG3 418 aa9.11□□□□□ -0.95
PTPRD-207ENST00000463477 WBP1Q96G27 269 aa9.11□□□□□ -0.95
PTPRD-207ENST00000463477 PRSS27Q9BQR3 290 aa9.11□□□□□ -0.95
PTPRD-207ENST00000463477 CNPPD1Q9BV87 410 aa9.11□□□□□ -0.95
PTPRD-207ENST00000463477 SLC7A5P2Q9GIP4 190 aa9.11□□□□□ -0.95
PTPRD-207ENST00000463477 ANKRA2Q9H9E1 313 aa9.11□□□□□ -0.95
PTPRD-207ENST00000463477 EXOSC4Q9NPD3 245 aaKnown RBP9.11□□□□□ -0.95
PTPRD-207ENST00000463477 CTPS2Q9NRF8 586 aa9.11□□□□□ -0.95
PTPRD-207ENST00000463477 ABCB10Q9NRK6 738 aa9.11□□□□□ -0.95
PTPRD-207ENST00000463477 TXNL4BQ9NX01 149 aaKnown RBP9.11□□□□□ -0.95
PTPRD-207ENST00000463477 MAT2BQ9NZL9 334 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms