RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 LSMEM1Q8N8F7 131 aa16.94■□□□□ 0.3
SEMA3B-209ENST00000456560 AVL9Q8NBF6 648 aa16.94■□□□□ 0.3
SEMA3B-209ENST00000456560 GRPEL2Q8TAA5 225 aa16.94■□□□□ 0.3
SEMA3B-209ENST00000456560 AHCYL2Q96HN2 611 aaKnown RBP16.94■□□□□ 0.3
SEMA3B-209ENST00000456560 ORAI3Q9BRQ5 295 aa16.94■□□□□ 0.3
SEMA3B-209ENST00000456560 RBCK1Q9BYM8 510 aa16.94■□□□□ 0.3
SEMA3B-209ENST00000456560 RNF121Q9H920 327 aa16.94■□□□□ 0.3
SEMA3B-209ENST00000456560 RPRD1BQ9NQG5 326 aaKnown RBP16.94■□□□□ 0.3
SEMA3B-209ENST00000456560 NDRG2Q9UN36 371 aaKnown RBP16.94■□□□□ 0.3
SEMA3B-209ENST00000456560 SLCO1B1Q9Y6L6 691 aa16.94■□□□□ 0.3
SEMA3B-209ENST00000456560 SLC9B1P1A6NJY1 282 aa16.93■□□□□ 0.3
SEMA3B-209ENST00000456560 RIIAD1A6NNX1 92 aa16.93■□□□□ 0.3
SEMA3B-209ENST00000456560 C2CD4DB7Z1M9 353 aa16.93■□□□□ 0.3
SEMA3B-209ENST00000456560 CTNSO60931 367 aa16.93■□□□□ 0.3
SEMA3B-209ENST00000456560 HLA-DQB1P01920 261 aa16.93■□□□□ 0.3
SEMA3B-209ENST00000456560 NGFRP08138 427 aa16.93■□□□□ 0.3
SEMA3B-209ENST00000456560 RNH1P13489 461 aaKnown RBP16.93■□□□□ 0.3
SEMA3B-209ENST00000456560 PTBP1P26599 531 aaKnown RBP eCLIP16.93■□□□□ 0.3
SEMA3B-209ENST00000456560 NOS3P29474 1203 aa16.93■□□□□ 0.3
SEMA3B-209ENST00000456560 GNG2P59768 71 aa16.93■□□□□ 0.3
SEMA3B-209ENST00000456560 MADCAM1Q13477 382 aa16.93■□□□□ 0.3
SEMA3B-209ENST00000456560 ZNF141Q15928 474 aa16.93■□□□□ 0.3
SEMA3B-209ENST00000456560 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.93■□□□□ 0.36e-6■■■■□ 22.6
SEMA3B-209ENST00000456560 Q5BKY6 102 aa16.93■□□□□ 0.3
SEMA3B-209ENST00000456560 FCRLBQ6BAA4 426 aa16.93■□□□□ 0.3
SEMA3B-209ENST00000456560 ZNF614Q8N883 585 aa16.93■□□□□ 0.3
SEMA3B-209ENST00000456560 OR10H4Q8NGA5 316 aa16.93■□□□□ 0.3
SEMA3B-209ENST00000456560 RIT1Q92963 219 aa16.93■□□□□ 0.3
SEMA3B-209ENST00000456560 TRIM63Q969Q1 353 aa16.93■□□□□ 0.3
SEMA3B-209ENST00000456560 ART5Q96L15 291 aa16.93■□□□□ 0.3
SEMA3B-209ENST00000456560 MCCC2Q9HCC0 563 aa16.93■□□□□ 0.3
SEMA3B-209ENST00000456560 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.93■□□□□ 0.3
SEMA3B-209ENST00000456560 HCN3Q9P1Z3 774 aa16.93■□□□□ 0.3
SEMA3B-209ENST00000456560 DTX4Q9Y2E6 619 aa16.93■□□□□ 0.3
SEMA3B-209ENST00000456560 CLDN16Q9Y5I7 305 aa16.93■□□□□ 0.3
SEMA3B-209ENST00000456560 PPP1R3DO95685 299 aa16.93■□□□□ 0.3
SEMA3B-209ENST00000456560 MLLT3P42568 568 aaPredicted RBP16.93■□□□□ 0.3
SEMA3B-209ENST00000456560 CRMP1Q14194 572 aa16.93■□□□□ 0.3
SEMA3B-209ENST00000456560 FGFBP1Q14512 234 aa16.93■□□□□ 0.3
SEMA3B-209ENST00000456560 COL19A1Q14993 1142 aa16.93■□□□□ 0.3
SEMA3B-209ENST00000456560 NPSR1Q6W5P4 371 aa16.93■□□□□ 0.3
SEMA3B-209ENST00000456560 RTL4Q6ZR62 310 aa16.93■□□□□ 0.3
SEMA3B-209ENST00000456560 SLC43A2Q8N370 569 aa16.93■□□□□ 0.3
SEMA3B-209ENST00000456560 NLGN4YQ8NFZ3 816 aaPredicted RBP16.93■□□□□ 0.3
SEMA3B-209ENST00000456560 OR5W2Q8NH69 310 aa16.93■□□□□ 0.3
SEMA3B-209ENST00000456560 OR4C6Q8NH72 309 aa16.93■□□□□ 0.3
SEMA3B-209ENST00000456560 ENKURQ8TC29 256 aa16.93■□□□□ 0.3
SEMA3B-209ENST00000456560 CDX2Q99626 313 aaPredicted RBP16.93■□□□□ 0.3
SEMA3B-209ENST00000456560 GPR174Q9BXC1 333 aa16.93■□□□□ 0.3
SEMA3B-209ENST00000456560 OR51V1Q9H2C8 321 aa16.93■□□□□ 0.3
SEMA3B-209ENST00000456560 ADGRL4Q9HBW9 690 aa16.93■□□□□ 0.3
SEMA3B-209ENST00000456560 HAO2Q9NYQ3 351 aa16.93■□□□□ 0.3
SEMA3B-209ENST00000456560 WSB2Q9NYS7 404 aaPredicted RBP16.93■□□□□ 0.3
SEMA3B-209ENST00000456560 A0A0B4J293 547 aa16.92■□□□□ 0.3
SEMA3B-209ENST00000456560 B4DGG1 531 aa16.92■□□□□ 0.3
SEMA3B-209ENST00000456560 E9PI62 339 aa16.92■□□□□ 0.3
SEMA3B-209ENST00000456560 HRO43593 1189 aa16.92■□□□□ 0.3
SEMA3B-209ENST00000456560 SBK2P0C263 348 aa16.92■□□□□ 0.3
SEMA3B-209ENST00000456560 PEPDP12955 493 aa16.92■□□□□ 0.3
SEMA3B-209ENST00000456560 GLULP15104 373 aa16.92■□□□□ 0.3
SEMA3B-209ENST00000456560 HK1P19367 917 aa16.92■□□□□ 0.3
SEMA3B-209ENST00000456560 CD53P19397 219 aa16.92■□□□□ 0.3
SEMA3B-209ENST00000456560 MTNR1BP49286 362 aa16.92■□□□□ 0.3
SEMA3B-209ENST00000456560 CSTF1Q05048 431 aaKnown RBP16.92■□□□□ 0.3
SEMA3B-209ENST00000456560 RIN1Q13671 783 aa16.92■□□□□ 0.3
SEMA3B-209ENST00000456560 QPRTQ15274 297 aa16.92■□□□□ 0.3
SEMA3B-209ENST00000456560 CCDC58Q4VC31 144 aa16.92■□□□□ 0.3
SEMA3B-209ENST00000456560 MZT2AQ6P582 158 aa16.92■□□□□ 0.3
SEMA3B-209ENST00000456560 OAFQ86UD1 273 aa16.92■□□□□ 0.3
SEMA3B-209ENST00000456560 SLC2A12Q8TD20 617 aa16.92■□□□□ 0.3
SEMA3B-209ENST00000456560 RNF31Q96EP0 1072 aa16.92■□□□□ 0.3
SEMA3B-209ENST00000456560 RBM18Q96H35 190 aaKnown RBP16.92■□□□□ 0.3
SEMA3B-209ENST00000456560 LRRC61Q9BV99 259 aa16.92■□□□□ 0.3
SEMA3B-209ENST00000456560 TRIM36Q9NQ86 728 aa16.92■□□□□ 0.3
SEMA3B-209ENST00000456560 TMA7Q9Y2S6 64 aaKnown RBP16.92■□□□□ 0.3
SEMA3B-209ENST00000456560 TRIOO75962 3097 aa16.92■□□□□ 0.3
SEMA3B-209ENST00000456560 SRPX2O60687 465 aaPredicted RBP16.92■□□□□ 0.3
SEMA3B-209ENST00000456560 MT-ND5P03915 603 aa16.92■□□□□ 0.3
SEMA3B-209ENST00000456560 CLUP10909 449 aa16.92■□□□□ 0.3
SEMA3B-209ENST00000456560 KIR2DL3P43628 341 aa16.92■□□□□ 0.3
SEMA3B-209ENST00000456560 RPS7P62081 194 aaKnown RBP16.92■□□□□ 0.3
SEMA3B-209ENST00000456560 ZNF85Q03923 595 aa16.92■□□□□ 0.3
SEMA3B-209ENST00000456560 STX4Q12846 297 aa16.92■□□□□ 0.3
SEMA3B-209ENST00000456560 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.92■□□□□ 0.3
SEMA3B-209ENST00000456560 Q6ZS52 159 aa16.92■□□□□ 0.3
SEMA3B-209ENST00000456560 NR2C2APQ86WQ0 139 aa16.92■□□□□ 0.3
SEMA3B-209ENST00000456560 ZNF595Q8IYB9 648 aa16.92■□□□□ 0.3
SEMA3B-209ENST00000456560 RCBTB1Q8NDN9 531 aa16.92■□□□□ 0.3
SEMA3B-209ENST00000456560 KLHDC7BQ96G42 594 aa16.92■□□□□ 0.3
SEMA3B-209ENST00000456560 PEX11GQ96HA9 241 aa16.92■□□□□ 0.3
SEMA3B-209ENST00000456560 SPACA7Q96KW9 195 aa16.92■□□□□ 0.3
SEMA3B-209ENST00000456560 KCNN2Q9H2S1 579 aa16.92■□□□□ 0.3
SEMA3B-209ENST00000456560 SYNDIG1Q9H7V2 258 aa16.92■□□□□ 0.3
SEMA3B-209ENST00000456560 SERTAD3Q9UJW9 196 aa16.92■□□□□ 0.3
SEMA3B-209ENST00000456560 ZMIZ1Q9ULJ6 1067 aa16.92■□□□□ 0.3
SEMA3B-209ENST00000456560 A0A1W2PPC4 97 aa16.91■□□□□ 0.3
SEMA3B-209ENST00000456560 OR6C70A6NIJ9 312 aa16.91■□□□□ 0.3
SEMA3B-209ENST00000456560 PLPP2O43688 288 aa16.91■□□□□ 0.3
SEMA3B-209ENST00000456560 SLC6A6P31641 620 aa16.91■□□□□ 0.3
SEMA3B-209ENST00000456560 BLKP51451 505 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms