RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 LAP3P28838 519 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 TACR3P29371 465 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 AQP1P29972 269 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 CORO1AP31146 461 aaKnown RBP4.91□□□□□ -1.62
CSMD3-204ENST00000455883 WDR5P61964 334 aaKnown RBP4.91□□□□□ -1.62
CSMD3-204ENST00000455883 PABPC1L2AQ5JQF8 200 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 ADIPOR2Q86V24 386 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 MARC2Q969Z3 335 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 TRMT2BQ96GJ1 504 aaKnown RBP4.91□□□□□ -1.62
CSMD3-204ENST00000455883 FERD3LQ96RJ6 166 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 ZMAT5Q9UDW3 170 aaKnown RBP4.91□□□□□ -1.62
CSMD3-204ENST00000455883 KIF26AQ9ULI4 1882 aaPredicted RBP4.91□□□□□ -1.62
CSMD3-204ENST00000455883 USP2O75604 605 aaPredicted RBP4.91□□□□□ -1.62
CSMD3-204ENST00000455883 ADRA2CP18825 462 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 MAGEB1P43366 347 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 C17orf107Q6ZR85 190 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 INTS14Q96SY0 518 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 TMEM204Q9BSN7 226 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 PLK3Q9H4B4 646 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 RPS10P5Q9NQ39 176 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 ERVK13-1Q9NX77 482 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 PCDHGC4Q9Y5F7 938 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 hCG_2039718K7EN88 272 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 KHNYNO15037 678 aaKnown RBP4.91□□□□□ -1.62
CSMD3-204ENST00000455883 SCAMP2O15127 329 aaKnown RBP4.91□□□□□ -1.62
CSMD3-204ENST00000455883 AHSGP02765 367 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 AMY2AP04746 511 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 GPR155Q7Z3F1 870 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 LYSMD2Q8IV50 215 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 STPG2Q8N412 459 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 TAAR1Q96RJ0 339 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 TXLNGYQ9BZA5 131 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 NKX6-2Q9C056 277 aaPredicted RBP4.91□□□□□ -1.62
CSMD3-204ENST00000455883 NHSQ6T4R5 1651 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 NPIPA2E9PIF3 369 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 NPIPA3F8WFD2 350 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 NDUFS4O43181 175 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 HNRNPA1P09651 372 aaKnown RBP eCLIP4.91□□□□□ -1.62
CSMD3-204ENST00000455883 H2BFMP0C1H6 154 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 HLA-DOBP13765 273 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 OPRD1P41143 372 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 SRP9P49458 86 aaKnown RBP4.91□□□□□ -1.62
CSMD3-204ENST00000455883 NOGQ13253 232 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 MBTPS1Q14703 1052 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 OXA1LQ15070 435 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 CLEC6AQ6EIG7 209 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 Q6ZNX1 250 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 ABI3BPQ7Z7G0 1075 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 SIGLEC10Q96LC7 697 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 STRADBQ9C0K7 418 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 EQTNQ9NQ60 294 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 CLEC4EQ9ULY5 219 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 LINC01387J3KSC0 135 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 LGI1O95970 557 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 ALPLP05186 524 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 CT45A6P0DMU7 189 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 CT45A5P0DMU8 189 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 CT45A7P0DMV0 189 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 CT45A8P0DMV1 189 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 CT45A9P0DMV2 189 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 STK11Q15831 433 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 CT45A2Q5DJT8 189 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 CT45A1Q5HYN5 189 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 XKR5Q6UX68 686 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 DPPA3Q6W0C5 159 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 ADGRE4PQ86SQ3 457 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 CT45A3Q8NHU0 189 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 SLC25A43Q8WUT9 341 aaPredicted RBP4.91□□□□□ -1.62
CSMD3-204ENST00000455883 DCLRE1CQ96SD1 692 aaKnown RBP4.91□□□□□ -1.62
CSMD3-204ENST00000455883 NPY6RQ99463 290 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 FZD8Q9H461 694 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 POMT2Q9UKY4 750 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 SMIM28A0A1B0GU29 152 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 CXorf65A6NEN9 183 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 PHOX2AO14813 284 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 EIF1BO60739 113 aaKnown RBP4.91□□□□□ -1.62
CSMD3-204ENST00000455883 PBLDP30039 288 aaPredicted RBP4.91□□□□□ -1.62
CSMD3-204ENST00000455883 SFTPDP35247 375 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 CDK5R2Q13319 367 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 TNK1Q13470 666 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 GRIN2CQ14957 1233 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 CAMKMTQ7Z624 323 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 PXT1Q8NFP0 134 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 AUTS2Q8WXX7 1259 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 J3QRK9 145 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 CPN1P15169 458 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 PMPCAQ10713 525 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 WBP2NLQ6ICG8 309 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 STEAP1BQ6NZ63 245 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 ZBTB46Q86UZ6 589 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 NRMQ8IXM6 262 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 HERVK_113Q902F9 699 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 FBXL8Q96CD0 374 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 IFT22Q9H7X7 185 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 NRIP3Q9NQ35 241 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 TMEM218A2RU14 115 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 NSA2O95478 260 aaKnown RBP4.91□□□□□ -1.62
CSMD3-204ENST00000455883 FGF3P11487 239 aaPredicted RBP4.91□□□□□ -1.62
CSMD3-204ENST00000455883 GABRB3P28472 473 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 BPIFB3P59826 476 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms