RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 EML4Q9HC35 981 aaKnown RBP7.09□□□□□ -1.27
NIF3L1-209ENST00000454952 TBK1Q9UHD2 729 aa7.09□□□□□ -1.27
NIF3L1-209ENST00000454952 ATP6V1HQ9UI12 483 aa7.09□□□□□ -1.27
NIF3L1-209ENST00000454952 GDF2Q9UK05 429 aaPredicted RBP7.09□□□□□ -1.27
NIF3L1-209ENST00000454952 EMCNQ9ULC0 261 aa7.09□□□□□ -1.27
NIF3L1-209ENST00000454952 B3GALT5Q9Y2C3 310 aa7.09□□□□□ -1.27
NIF3L1-209ENST00000454952 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.09□□□□□ -1.27
NIF3L1-209ENST00000454952 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.09□□□□□ -1.28
NIF3L1-209ENST00000454952 FBN1P35555 2871 aaKnown RBP7.08□□□□□ -1.28
NIF3L1-209ENST00000454952 IGKV3D-15A0A087WSY6 115 aa7.08□□□□□ -1.28
NIF3L1-209ENST00000454952 CIB4A0PJX0 185 aa7.08□□□□□ -1.28
NIF3L1-209ENST00000454952 FAM234BA2RU67 622 aa7.08□□□□□ -1.28
NIF3L1-209ENST00000454952 CCT8L1PA6NM43 557 aa7.08□□□□□ -1.28
NIF3L1-209ENST00000454952 NPIPB9F8W1W9 429 aa7.08□□□□□ -1.28
NIF3L1-209ENST00000454952 H7C417 338 aa7.08□□□□□ -1.28
NIF3L1-209ENST00000454952 SULT2B1O00204 365 aa7.08□□□□□ -1.28
NIF3L1-209ENST00000454952 COPEO14579 308 aa7.08□□□□□ -1.28
NIF3L1-209ENST00000454952 LSM1O15116 133 aaKnown RBP7.08□□□□□ -1.28
NIF3L1-209ENST00000454952 SCAMP2O15127 329 aaKnown RBP7.08□□□□□ -1.28
NIF3L1-209ENST00000454952 EFNA2O43921 213 aa7.08□□□□□ -1.28
NIF3L1-209ENST00000454952 TRIM13O60858 407 aa7.08□□□□□ -1.28
NIF3L1-209ENST00000454952 RAMP1O60894 148 aa7.08□□□□□ -1.28
NIF3L1-209ENST00000454952 AGR2O95994 175 aa7.08□□□□□ -1.28
NIF3L1-209ENST00000454952 FGF4P08620 206 aa7.08□□□□□ -1.28
NIF3L1-209ENST00000454952 LINC00032P0C843 101 aa7.08□□□□□ -1.28
NIF3L1-209ENST00000454952 BCKDHAP12694 445 aa7.08□□□□□ -1.28
NIF3L1-209ENST00000454952 PGCP20142 388 aa7.08□□□□□ -1.28
NIF3L1-209ENST00000454952 HNF1AP20823 631 aa7.08□□□□□ -1.28
NIF3L1-209ENST00000454952 IGHV1-2P23083 117 aa7.08□□□□□ -1.28
NIF3L1-209ENST00000454952 PAX7P23759 505 aa7.08□□□□□ -1.28
NIF3L1-209ENST00000454952 CLK1P49759 484 aaKnown RBP7.08□□□□□ -1.28
NIF3L1-209ENST00000454952 DIO1P49895 249 aa7.08□□□□□ -1.28
NIF3L1-209ENST00000454952 FABP6P51161 128 aa7.08□□□□□ -1.28
NIF3L1-209ENST00000454952 CCR4P51679 360 aa7.08□□□□□ -1.28
NIF3L1-209ENST00000454952 CASP9P55211 416 aa7.08□□□□□ -1.28
NIF3L1-209ENST00000454952 GALNTL6Q49A17 601 aa7.08□□□□□ -1.28
NIF3L1-209ENST00000454952 TIGD2Q4W5G0 525 aa7.08□□□□□ -1.28
NIF3L1-209ENST00000454952 ZNF385BQ569K4 471 aa7.08□□□□□ -1.28
NIF3L1-209ENST00000454952 KANK2Q63ZY3 851 aa7.08□□□□□ -1.28
NIF3L1-209ENST00000454952 CBLN3Q6UW01 205 aa7.08□□□□□ -1.28
NIF3L1-209ENST00000454952 TMPPEQ6ZT21 453 aa7.08□□□□□ -1.28
NIF3L1-209ENST00000454952 MTDHQ86UE4 582 aaKnown RBP7.08□□□□□ -1.28
NIF3L1-209ENST00000454952 DDIASQ8IXT1 998 aa7.08□□□□□ -1.28
NIF3L1-209ENST00000454952 UBE2J2Q8N2K1 259 aa7.08□□□□□ -1.28
NIF3L1-209ENST00000454952 C17orf78Q8N4C9 275 aa7.08□□□□□ -1.28
NIF3L1-209ENST00000454952 ZNF433Q8N7K0 673 aaPredicted RBP7.08□□□□□ -1.28
NIF3L1-209ENST00000454952 CLHC1Q8NHS4 586 aa7.08□□□□□ -1.28
NIF3L1-209ENST00000454952 RFWD2Q8NHY2 731 aa7.08□□□□□ -1.28
NIF3L1-209ENST00000454952 PIGXQ8TBF5 258 aa7.08□□□□□ -1.28
NIF3L1-209ENST00000454952 MZB1Q8WU39 189 aa7.08□□□□□ -1.28
NIF3L1-209ENST00000454952 FAM168AQ92567 244 aa7.08□□□□□ -1.28
NIF3L1-209ENST00000454952 OTUB1Q96FW1 271 aaPredicted RBP7.08□□□□□ -1.28
NIF3L1-209ENST00000454952 C16orf45Q96MC5 204 aaPredicted RBP7.08□□□□□ -1.28
NIF3L1-209ENST00000454952 CACNG6Q9BXT2 260 aa7.08□□□□□ -1.28
NIF3L1-209ENST00000454952 LAT2Q9GZY6 243 aa7.08□□□□□ -1.28
NIF3L1-209ENST00000454952 SHARPINQ9H0F6 387 aa7.08□□□□□ -1.28
NIF3L1-209ENST00000454952 CXorf36Q9H7Y0 433 aa7.08□□□□□ -1.28
NIF3L1-209ENST00000454952 SIRT3Q9NTG7 399 aaPredicted RBP7.08□□□□□ -1.28
NIF3L1-209ENST00000454952 ASB6Q9NWX5 421 aa7.08□□□□□ -1.28
NIF3L1-209ENST00000454952 TAS2R16Q9NYV7 291 aa7.08□□□□□ -1.28
NIF3L1-209ENST00000454952 BAIAP2L1Q9UHR4 511 aa7.08□□□□□ -1.28
NIF3L1-209ENST00000454952 PRSS50Q9UI38 385 aa7.08□□□□□ -1.28
NIF3L1-209ENST00000454952 NOSIPQ9Y314 301 aaKnown RBP7.08□□□□□ -1.28
NIF3L1-209ENST00000454952 PMF1-BGLAPU3KQ54 211 aa7.08□□□□□ -1.28
NIF3L1-209ENST00000454952 IGHV4-30-2A0A087WSY4 118 aa7.07□□□□□ -1.28
NIF3L1-209ENST00000454952 IGHV3-15A0A0B4J1V0 119 aa7.07□□□□□ -1.28
NIF3L1-209ENST00000454952 A0A1W2PNR3 127 aa7.07□□□□□ -1.28
NIF3L1-209ENST00000454952 SERINC4A6NH21 518 aa7.07□□□□□ -1.28
NIF3L1-209ENST00000454952 SMAD9O15198 467 aaKnown RBP7.07□□□□□ -1.28
NIF3L1-209ENST00000454952 CFLARO15519 480 aa7.07□□□□□ -1.28
NIF3L1-209ENST00000454952 DNAJA2O60884 412 aa7.07□□□□□ -1.28
NIF3L1-209ENST00000454952 NDUFS7O75251 213 aa7.07□□□□□ -1.28
NIF3L1-209ENST00000454952 STX11O75558 287 aa7.07□□□□□ -1.28
NIF3L1-209ENST00000454952 CSTAP01040 98 aa7.07□□□□□ -1.28
NIF3L1-209ENST00000454952 C8BP07358 591 aa7.07□□□□□ -1.28
NIF3L1-209ENST00000454952 GUSBP08236 651 aa7.07□□□□□ -1.28
NIF3L1-209ENST00000454952 PRPS1L1P21108 318 aa7.07□□□□□ -1.28
NIF3L1-209ENST00000454952 USF1P22415 310 aaPredicted RBP7.07□□□□□ -1.28
NIF3L1-209ENST00000454952 CD40P25942 277 aa7.07□□□□□ -1.28
NIF3L1-209ENST00000454952 APOBEC1P41238 236 aaKnown RBP7.07□□□□□ -1.28
NIF3L1-209ENST00000454952 GZMKP49863 264 aa7.07□□□□□ -1.28
NIF3L1-209ENST00000454952 ZNF83P51522 516 aa7.07□□□□□ -1.28
NIF3L1-209ENST00000454952 EFNA4P52798 201 aa7.07□□□□□ -1.28
NIF3L1-209ENST00000454952 IRX1P78414 480 aaPredicted RBP7.07□□□□□ -1.28
NIF3L1-209ENST00000454952 TGFBR3Q03167 851 aa7.07□□□□□ -1.28
NIF3L1-209ENST00000454952 MERTKQ12866 999 aa7.07□□□□□ -1.28
NIF3L1-209ENST00000454952 TOMM34Q15785 309 aaPredicted RBP7.07□□□□□ -1.28
NIF3L1-209ENST00000454952 ZNF141Q15928 474 aa7.07□□□□□ -1.28
NIF3L1-209ENST00000454952 ATP6AP1LQ52LC2 224 aa7.07□□□□□ -1.28
NIF3L1-209ENST00000454952 SYT14P1Q58G82 188 aa7.07□□□□□ -1.28
NIF3L1-209ENST00000454952 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.07□□□□□ -1.28
NIF3L1-209ENST00000454952 ATAD3BQ5T9A4 648 aa7.07□□□□□ -1.28
NIF3L1-209ENST00000454952 ABLIM2Q6H8Q1 611 aa7.07□□□□□ -1.28
NIF3L1-209ENST00000454952 C11orf71Q6IPW1 123 aa7.07□□□□□ -1.28
NIF3L1-209ENST00000454952 EIF3MQ7L2H7 374 aaKnown RBP7.07□□□□□ -1.28
NIF3L1-209ENST00000454952 C17orf53Q8N3J3 647 aaPredicted RBP7.07□□□□□ -1.28
NIF3L1-209ENST00000454952 C1orf162Q8NEQ5 155 aaPredicted RBP7.07□□□□□ -1.28
NIF3L1-209ENST00000454952 OR2T11Q8NH01 316 aa7.07□□□□□ -1.28
NIF3L1-209ENST00000454952 TWIST2Q8WVJ9 160 aa7.07□□□□□ -1.28
NIF3L1-209ENST00000454952 ZNF75CPQ92670 426 aaPredicted RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms