RNA–Protein interactions for RNA: ENST00000453046.5

SQSTM1-204, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-204ENST00000453046 B4DXG7 233 aa16.24■□□□□ 0.19
SQSTM1-204ENST00000453046 NKX2-2O95096 273 aa16.24■□□□□ 0.19
SQSTM1-204ENST00000453046 GPIP06744 558 aa16.24■□□□□ 0.19
SQSTM1-204ENST00000453046 TFPTP0C1Z6 253 aa16.24■□□□□ 0.19
SQSTM1-204ENST00000453046 HOXB6P17509 224 aaKnown RBP16.24■□□□□ 0.19
SQSTM1-204ENST00000453046 ART1P52961 327 aa16.24■□□□□ 0.19
SQSTM1-204ENST00000453046 CRISP3P54108 245 aa16.24■□□□□ 0.19
SQSTM1-204ENST00000453046 EEF1A1P68104 462 aaKnown RBP16.24■□□□□ 0.19
SQSTM1-204ENST00000453046 HPCAP84074 193 aa16.24■□□□□ 0.19
SQSTM1-204ENST00000453046 C17orf67Q0P5P2 114 aa16.24■□□□□ 0.19
SQSTM1-204ENST00000453046 FUT5Q11128 374 aa16.24■□□□□ 0.19
SQSTM1-204ENST00000453046 DUSP5Q16690 384 aa16.24■□□□□ 0.19
SQSTM1-204ENST00000453046 EEF1A1P5Q5VTE0 462 aa16.24■□□□□ 0.19
SQSTM1-204ENST00000453046 SPNS3Q6ZMD2 512 aa16.24■□□□□ 0.19
SQSTM1-204ENST00000453046 PATL1Q86TB9 770 aaKnown RBP16.24■□□□□ 0.19
SQSTM1-204ENST00000453046 COX18Q8N8Q8 333 aa16.24■□□□□ 0.19
SQSTM1-204ENST00000453046 SLC16A11Q8NCK7 471 aa16.24■□□□□ 0.19
SQSTM1-204ENST00000453046 BBS10Q8TAM1 723 aa16.24■□□□□ 0.19
SQSTM1-204ENST00000453046 LINC01560Q8TB33 94 aa16.24■□□□□ 0.19
SQSTM1-204ENST00000453046 SLC26A7Q8TE54 656 aa16.24■□□□□ 0.19
SQSTM1-204ENST00000453046 XAGE5Q8WWM1 108 aa16.24■□□□□ 0.19
SQSTM1-204ENST00000453046 DUS3LQ96G46 650 aaKnown RBP16.24■□□□□ 0.19
SQSTM1-204ENST00000453046 YIPF4Q9BSR8 244 aa16.24■□□□□ 0.19
SQSTM1-204ENST00000453046 G6PC3Q9BUM1 346 aa16.24■□□□□ 0.19
SQSTM1-204ENST00000453046 BCL2L10Q9HD36 194 aa16.24■□□□□ 0.19
SQSTM1-204ENST00000453046 JKAMPQ9P055 326 aa16.24■□□□□ 0.19
SQSTM1-204ENST00000453046 EDARQ9UNE0 448 aa16.24■□□□□ 0.19
SQSTM1-204ENST00000453046 DOCK7Q96N67 2140 aa16.24■□□□□ 0.19
SQSTM1-204ENST00000453046 GMFGO60234 142 aa16.23■□□□□ 0.19
SQSTM1-204ENST00000453046 ANGPTL1O95841 491 aa16.23■□□□□ 0.19
SQSTM1-204ENST00000453046 NR2F1P10589 423 aa16.23■□□□□ 0.19
SQSTM1-204ENST00000453046 UMPSP11172 480 aa16.23■□□□□ 0.19
SQSTM1-204ENST00000453046 EPXP11678 715 aa16.23■□□□□ 0.19
SQSTM1-204ENST00000453046 KDELR2P33947 212 aa16.23■□□□□ 0.19
SQSTM1-204ENST00000453046 B3GALT5-AS1P59052 145 aa16.23■□□□□ 0.19
SQSTM1-204ENST00000453046 SORDQ00796 357 aa16.23■□□□□ 0.19
SQSTM1-204ENST00000453046 LRRC23Q53EV4 343 aaPredicted RBP16.23■□□□□ 0.19
SQSTM1-204ENST00000453046 C16orf62Q7Z3J2 963 aa16.23■□□□□ 0.19
SQSTM1-204ENST00000453046 CHDHQ8NE62 594 aaPredicted RBP16.23■□□□□ 0.19
SQSTM1-204ENST00000453046 OTUB1Q96FW1 271 aaPredicted RBP16.23■□□□□ 0.19
SQSTM1-204ENST00000453046 TRNT1Q96Q11 434 aaKnown RBP16.23■□□□□ 0.19
SQSTM1-204ENST00000453046 PIGQQ9BRB3 760 aa16.23■□□□□ 0.19
SQSTM1-204ENST00000453046 BTBD2Q9BX70 525 aa16.23■□□□□ 0.19
SQSTM1-204ENST00000453046 RTN4RQ9BZR6 473 aa16.23■□□□□ 0.19
SQSTM1-204ENST00000453046 PIGMQ9H3S5 423 aa16.23■□□□□ 0.19
SQSTM1-204ENST00000453046 DCAF13Q9NV06 445 aaKnown RBP16.23■□□□□ 0.19
SQSTM1-204ENST00000453046 RPS6KA6Q9UK32 745 aa16.23■□□□□ 0.19
SQSTM1-204ENST00000453046 SAMD4AQ9UPU9 718 aaKnown RBP16.23■□□□□ 0.19
SQSTM1-204ENST00000453046 DHRS12A0PJE2 317 aa16.22■□□□□ 0.19
SQSTM1-204ENST00000453046 PRAMEF27A3QJZ7 478 aa16.22■□□□□ 0.19
SQSTM1-204ENST00000453046 SLC22A20A6NK97 555 aa16.22■□□□□ 0.19
SQSTM1-204ENST00000453046 H3BML4 177 aa16.22■□□□□ 0.19
SQSTM1-204ENST00000453046 LINC01387J3KSC0 135 aa16.22■□□□□ 0.19
SQSTM1-204ENST00000453046 SEC14L5O43304 696 aa16.22■□□□□ 0.19
SQSTM1-204ENST00000453046 IFNA14P01570 189 aa16.22■□□□□ 0.19
SQSTM1-204ENST00000453046 PSMA4P25789 261 aaKnown RBP16.22■□□□□ 0.19
SQSTM1-204ENST00000453046 IST1P53990 364 aa16.22■□□□□ 0.19
SQSTM1-204ENST00000453046 MAPK11Q15759 364 aa16.22■□□□□ 0.19
SQSTM1-204ENST00000453046 GRAMD1BQ3KR37 738 aa16.22■□□□□ 0.19
SQSTM1-204ENST00000453046 OR2A2Q6IF42 318 aa16.22■□□□□ 0.19
SQSTM1-204ENST00000453046 LRRC74BQ6ZQY2 392 aa16.22■□□□□ 0.19
SQSTM1-204ENST00000453046 GALNT10Q86SR1 603 aa16.22■□□□□ 0.19
SQSTM1-204ENST00000453046 ANKFN1Q8N957 763 aa16.22■□□□□ 0.19
SQSTM1-204ENST00000453046 OR5M1Q8NGP8 315 aa16.22■□□□□ 0.19
SQSTM1-204ENST00000453046 CDS1Q92903 461 aa16.22■□□□□ 0.19
SQSTM1-204ENST00000453046 C1GALT1C1Q96EU7 318 aa16.22■□□□□ 0.19
SQSTM1-204ENST00000453046 ZNF337Q9Y3M9 751 aa16.22■□□□□ 0.19
SQSTM1-204ENST00000453046 DSPPQ9NZW4 1301 aa16.21■□□□□ 0.19
SQSTM1-204ENST00000453046 HIVEP1P15822 2718 aa16.21■□□□□ 0.19
SQSTM1-204ENST00000453046 OR2M5A3KFT3 312 aa16.21■□□□□ 0.19
SQSTM1-204ENST00000453046 FAM221AA4D161 298 aa16.21■□□□□ 0.19
SQSTM1-204ENST00000453046 HCRTR2O43614 444 aa16.21■□□□□ 0.19
SQSTM1-204ENST00000453046 KRT36O76013 467 aa16.21■□□□□ 0.19
SQSTM1-204ENST00000453046 PGM3O95394 542 aa16.21■□□□□ 0.19
SQSTM1-204ENST00000453046 TGM6O95932 706 aa16.21■□□□□ 0.19
SQSTM1-204ENST00000453046 SERPINA1P01009 418 aa16.21■□□□□ 0.19
SQSTM1-204ENST00000453046 IGKV1D-16P01601 117 aa16.21■□□□□ 0.19
SQSTM1-204ENST00000453046 CHRM4P08173 479 aa16.21■□□□□ 0.19
SQSTM1-204ENST00000453046 GUSBP08236 651 aa16.21■□□□□ 0.19
SQSTM1-204ENST00000453046 ETS2P15036 469 aa16.21■□□□□ 0.19
SQSTM1-204ENST00000453046 HPGDP15428 266 aa16.21■□□□□ 0.19
SQSTM1-204ENST00000453046 AQP1P29972 269 aa16.21■□□□□ 0.19
SQSTM1-204ENST00000453046 ERFP50548 548 aa16.21■□□□□ 0.19
SQSTM1-204ENST00000453046 POU6F2P78424 691 aaPredicted RBP16.21■□□□□ 0.19
SQSTM1-204ENST00000453046 DAZAP2Q15038 168 aaPredicted RBP16.21■□□□□ 0.19
SQSTM1-204ENST00000453046 SYPL1Q16563 259 aa16.21■□□□□ 0.19
SQSTM1-204ENST00000453046 ARHGAP11BQ3KRB8 267 aa16.21■□□□□ 0.19
SQSTM1-204ENST00000453046 FIGNL1Q6PIW4 674 aa16.21■□□□□ 0.19
SQSTM1-204ENST00000453046 CBLL1Q75N03 491 aa16.21■□□□□ 0.19
SQSTM1-204ENST00000453046 CDC20BQ86Y33 519 aa16.21■□□□□ 0.19
SQSTM1-204ENST00000453046 KRT73Q86Y46 540 aa16.21■□□□□ 0.19
SQSTM1-204ENST00000453046 ADGRG5Q8IZF4 528 aa16.21■□□□□ 0.19
SQSTM1-204ENST00000453046 CNEP1R1Q8N9A8 125 aa16.21■□□□□ 0.19
SQSTM1-204ENST00000453046 SMPDL3BQ92485 455 aa16.21■□□□□ 0.19
SQSTM1-204ENST00000453046 NINJ1Q92982 152 aa16.21■□□□□ 0.19
SQSTM1-204ENST00000453046 ZNF607Q96SK3 696 aa16.21■□□□□ 0.19
SQSTM1-204ENST00000453046 ZNF350Q9GZX5 532 aa16.21■□□□□ 0.19
SQSTM1-204ENST00000453046 MAGIXQ9H6Y5 334 aa16.21■□□□□ 0.19
SQSTM1-204ENST00000453046 DCLRE1BQ9H816 532 aa16.21■□□□□ 0.19
SQSTM1-204ENST00000453046 HHATLQ9HCP6 504 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms