RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 ACY1Q03154 408 aa9.85□□□□□ -0.83
PKP4-206ENST00000452162 C1DQ13901 141 aaKnown RBP9.85□□□□□ -0.83
PKP4-206ENST00000452162 ZNF267Q14586 743 aaPredicted RBP9.85□□□□□ -0.83
PKP4-206ENST00000452162 TMEM44Q2T9K0 475 aa9.85□□□□□ -0.83
PKP4-206ENST00000452162 TCTE1Q5JU00 501 aa9.85□□□□□ -0.83
PKP4-206ENST00000452162 TMEM164Q5U3C3 297 aa9.85□□□□□ -0.83
PKP4-206ENST00000452162 CENPSQ8N2Z9 138 aa9.85□□□□□ -0.83
PKP4-206ENST00000452162 METTL27Q8N6F8 245 aaPredicted RBP9.85□□□□□ -0.83
PKP4-206ENST00000452162 OR2T33Q8NG76 320 aa9.85□□□□□ -0.83
PKP4-206ENST00000452162 ZNF501Q96CX3 271 aaPredicted RBP9.85□□□□□ -0.83
PKP4-206ENST00000452162 MMABQ96EY8 250 aaPredicted RBP9.85□□□□□ -0.83
PKP4-206ENST00000452162 TEX12Q9BXU0 123 aa9.85□□□□□ -0.83
PKP4-206ENST00000452162 DPH1Q9BZG8 443 aa9.85□□□□□ -0.83
PKP4-206ENST00000452162 SPRTNQ9H040 489 aaPredicted RBP9.85□□□□□ -0.83
PKP4-206ENST00000452162 UBQLN3Q9H347 655 aa9.85□□□□□ -0.83
PKP4-206ENST00000452162 TBCCD1Q9NVR7 557 aa9.85□□□□□ -0.83
PKP4-206ENST00000452162 DNAJB12Q9NXW2 375 aaKnown RBP9.85□□□□□ -0.83
PKP4-206ENST00000452162 SEC14L4Q9UDX3 406 aa9.85□□□□□ -0.83
PKP4-206ENST00000452162 PTPRQQ9UMZ3 2332 aa9.85□□□□□ -0.83
PKP4-206ENST00000452162 A0A0B4J2E0 115 aa9.85□□□□□ -0.83
PKP4-206ENST00000452162 A0A1B0GX12 115 aa9.85□□□□□ -0.83
PKP4-206ENST00000452162 OR2W5A6NFC9 320 aa9.85□□□□□ -0.83
PKP4-206ENST00000452162 H0YIG0 161 aa9.85□□□□□ -0.83
PKP4-206ENST00000452162 ADAM11O75078 769 aa9.85□□□□□ -0.83
PKP4-206ENST00000452162 APOL3O95236 402 aa9.85□□□□□ -0.83
PKP4-206ENST00000452162 CLPSP04118 112 aa9.85□□□□□ -0.83
PKP4-206ENST00000452162 FGF5P12034 268 aa9.85□□□□□ -0.83
PKP4-206ENST00000452162 ZNF28P17035 718 aa9.85□□□□□ -0.83
PKP4-206ENST00000452162 MYL12AP19105 171 aa9.85□□□□□ -0.83
PKP4-206ENST00000452162 FUT1P19526 365 aa9.85□□□□□ -0.83
PKP4-206ENST00000452162 TBXA2RP21731 343 aa9.85□□□□□ -0.83
PKP4-206ENST00000452162 ACAA2P42765 397 aaKnown RBP9.85□□□□□ -0.83
PKP4-206ENST00000452162 CRYBB2P43320 205 aa9.85□□□□□ -0.83
PKP4-206ENST00000452162 GCGRP47871 477 aa9.85□□□□□ -0.83
PKP4-206ENST00000452162 RFX3P48380 749 aa9.85□□□□□ -0.83
PKP4-206ENST00000452162 HSD17B7P56937 341 aa9.85□□□□□ -0.83
PKP4-206ENST00000452162 IFITM3Q01628 133 aa9.85□□□□□ -0.83
PKP4-206ENST00000452162 FUT7Q11130 342 aa9.85□□□□□ -0.83
PKP4-206ENST00000452162 IL11RAQ14626 422 aa9.85□□□□□ -0.83
PKP4-206ENST00000452162 ZNF141Q15928 474 aa9.85□□□□□ -0.83
PKP4-206ENST00000452162 RGS21Q2M5E4 152 aa9.85□□□□□ -0.83
PKP4-206ENST00000452162 PRAMEF17Q5VTA0 474 aa9.85□□□□□ -0.83
PKP4-206ENST00000452162 GDPGP1Q6ZNW5 385 aa9.85□□□□□ -0.83
PKP4-206ENST00000452162 TMPRSS11FQ6ZWK6 438 aa9.85□□□□□ -0.83
PKP4-206ENST00000452162 KDF1Q8NAX2 398 aaPredicted RBP9.85□□□□□ -0.83
PKP4-206ENST00000452162 OR51Q1Q8NH59 317 aa9.85□□□□□ -0.83
PKP4-206ENST00000452162 FANK1Q8TC84 345 aa9.85□□□□□ -0.83
PKP4-206ENST00000452162 ARSGQ96EG1 525 aa9.85□□□□□ -0.83
PKP4-206ENST00000452162 OR52D1Q9H346 318 aa9.85□□□□□ -0.83
PKP4-206ENST00000452162 FLRT3Q9NZU0 649 aa9.85□□□□□ -0.83
PKP4-206ENST00000452162 IL20RAQ9UHF4 553 aa9.85□□□□□ -0.83
PKP4-206ENST00000452162 RARRES3Q9UL19 164 aa9.85□□□□□ -0.83
PKP4-206ENST00000452162 RAXQ9Y2V3 346 aa9.85□□□□□ -0.83
PKP4-206ENST00000452162 EXOSC1Q9Y3B2 195 aaKnown RBP9.85□□□□□ -0.83
PKP4-206ENST00000452162 TMEM150CB9EJG8 249 aa9.84□□□□□ -0.83
PKP4-206ENST00000452162 H3BMH7 237 aa9.84□□□□□ -0.83
PKP4-206ENST00000452162 TPD52L2O43399 206 aaKnown RBP9.84□□□□□ -0.83
PKP4-206ENST00000452162 SLC2A10O95528 541 aa9.84□□□□□ -0.83
PKP4-206ENST00000452162 HMGN1P05114 100 aa9.84□□□□□ -0.83
PKP4-206ENST00000452162 LIMS3P0CW19 117 aa9.84□□□□□ -0.83
PKP4-206ENST00000452162 LIMS4P0CW20 117 aa9.84□□□□□ -0.83
PKP4-206ENST00000452162 CT45A8P0DMV1 189 aa9.84□□□□□ -0.83
PKP4-206ENST00000452162 CT45A9P0DMV2 189 aa9.84□□□□□ -0.83
PKP4-206ENST00000452162 IFI30P13284 250 aa9.84□□□□□ -0.83
PKP4-206ENST00000452162 CPEP16870 476 aa9.84□□□□□ -0.83
PKP4-206ENST00000452162 CDH11P55287 796 aa9.84□□□□□ -0.83
PKP4-206ENST00000452162 CTBP2P56545 445 aa9.84□□□□□ -0.83
PKP4-206ENST00000452162 CT45A2Q5DJT8 189 aa9.84□□□□□ -0.83
PKP4-206ENST00000452162 PWWP2BQ6NUJ5 590 aa9.84□□□□□ -0.83
PKP4-206ENST00000452162 HSDL2Q6YN16 418 aa9.84□□□□□ -0.83
PKP4-206ENST00000452162 PPP1R3BQ86XI6 285 aa9.84□□□□□ -0.83
PKP4-206ENST00000452162 PHC2Q8IXK0 858 aa9.84□□□□□ -0.83
PKP4-206ENST00000452162 ZNF615Q8N8J6 731 aa9.84□□□□□ -0.83
PKP4-206ENST00000452162 OR1L3Q8NH93 324 aa9.84□□□□□ -0.83
PKP4-206ENST00000452162 RFKQ969G6 155 aa9.84□□□□□ -0.83
PKP4-206ENST00000452162 TRMT61AQ96FX7 289 aaKnown RBP9.84□□□□□ -0.83
PKP4-206ENST00000452162 COX4I2Q96KJ9 171 aa9.84□□□□□ -0.83
PKP4-206ENST00000452162 HS6ST2Q96MM7 605 aa9.84□□□□□ -0.83
PKP4-206ENST00000452162 TMEM27Q9HBJ8 222 aa9.84□□□□□ -0.83
PKP4-206ENST00000452162 ATP13A2Q9NQ11 1180 aa9.84□□□□□ -0.83
PKP4-206ENST00000452162 ENAMQ9NRM1 1142 aa9.84□□□□□ -0.83
PKP4-206ENST00000452162 STUB1Q9UNE7 303 aa9.84□□□□□ -0.83
PKP4-206ENST00000452162 ERVK-19Q9WJR5 959 aa9.84□□□□□ -0.83
PKP4-206ENST00000452162 CFL2Q9Y281 166 aa9.84□□□□□ -0.83
PKP4-206ENST00000452162 TMEM5Q9Y2B1 443 aa9.84□□□□□ -0.83
PKP4-206ENST00000452162 PKD1L2Q7Z442 2459 aa9.84□□□□□ -0.83
PKP4-206ENST00000452162 TEX51A0A1B0GUA7 166 aa9.83□□□□□ -0.84
PKP4-206ENST00000452162 A0A1B0GWA3 101 aa9.83□□□□□ -0.84
PKP4-206ENST00000452162 WWP2O00308 870 aa9.83□□□□□ -0.84
PKP4-206ENST00000452162 BHLHE40O14503 412 aa9.83□□□□□ -0.84
PKP4-206ENST00000452162 CHP2O43745 196 aa9.83□□□□□ -0.84
PKP4-206ENST00000452162 HTR1FP30939 366 aa9.83□□□□□ -0.84
PKP4-206ENST00000452162 GALNSP34059 522 aa9.83□□□□□ -0.84
PKP4-206ENST00000452162 WNT4P56705 351 aa9.83□□□□□ -0.84
PKP4-206ENST00000452162 ATP1A4Q13733 1029 aa9.83□□□□□ -0.84
PKP4-206ENST00000452162 FGFBP1Q14512 234 aa9.83□□□□□ -0.84
PKP4-206ENST00000452162 GRM7Q14831 915 aa9.83□□□□□ -0.84
PKP4-206ENST00000452162 TGIF1Q15583 401 aa9.83□□□□□ -0.84
PKP4-206ENST00000452162 NXNL2Q5VZ03 156 aa9.83□□□□□ -0.84
PKP4-206ENST00000452162 ZNF485Q8NCK3 441 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms