RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 TRAV1-2A0A0B4J238 106 aa8.74□□□□□ -1.01
SYNPO2-204ENST00000448416 LRRC72A6NJI9 287 aa8.74□□□□□ -1.01
SYNPO2-204ENST00000448416 ZNF729A6NN14 1252 aaPredicted RBP8.74□□□□□ -1.01
SYNPO2-204ENST00000448416 ARL6IP5O75915 188 aa8.74□□□□□ -1.01
SYNPO2-204ENST00000448416 PRG2P13727 222 aa8.74□□□□□ -1.01
SYNPO2-204ENST00000448416 ZNF3P17036 446 aa8.74□□□□□ -1.01
SYNPO2-204ENST00000448416 PPP2R1BP30154 601 aa8.74□□□□□ -1.01
SYNPO2-204ENST00000448416 GPR4P46093 362 aa8.74□□□□□ -1.01
SYNPO2-204ENST00000448416 NDUFAF6Q330K2 333 aa8.74□□□□□ -1.01
SYNPO2-204ENST00000448416 DUSP28Q4G0W2 176 aa8.74□□□□□ -1.01
SYNPO2-204ENST00000448416 OR2B11Q5JQS5 317 aa8.74□□□□□ -1.01
SYNPO2-204ENST00000448416 LRRTM4Q86VH4 590 aa8.74□□□□□ -1.01
SYNPO2-204ENST00000448416 TTC9BQ8N6N2 239 aa8.74□□□□□ -1.01
SYNPO2-204ENST00000448416 FBXO17Q96EF6 278 aa8.74□□□□□ -1.01
SYNPO2-204ENST00000448416 CNTNAP3BQ96NU0 1288 aa8.74□□□□□ -1.01
SYNPO2-204ENST00000448416 FAM117AQ9C073 453 aa8.74□□□□□ -1.01
SYNPO2-204ENST00000448416 CARHSP1Q9Y2V2 147 aaKnown RBP8.74□□□□□ -1.01
SYNPO2-204ENST00000448416 J3QRE1 110 aa8.74□□□□□ -1.01
SYNPO2-204ENST00000448416 MRPL3P09001 348 aaKnown RBP8.74□□□□□ -1.01
SYNPO2-204ENST00000448416 ZDHHC11BP0C7U3 371 aa8.74□□□□□ -1.01
SYNPO2-204ENST00000448416 HMGB2P26583 209 aaKnown RBP8.74□□□□□ -1.01
SYNPO2-204ENST00000448416 MECP2P51608 486 aaKnown RBP8.74□□□□□ -1.01
SYNPO2-204ENST00000448416 DEFA6Q01524 100 aa8.74□□□□□ -1.01
SYNPO2-204ENST00000448416 ARSIQ5FYB1 569 aa8.74□□□□□ -1.01
SYNPO2-204ENST00000448416 ZNF697Q5TEC3 545 aa8.74□□□□□ -1.01
SYNPO2-204ENST00000448416 TPGS1Q6ZTW0 290 aa8.74□□□□□ -1.01
SYNPO2-204ENST00000448416 SLC36A1Q7Z2H8 476 aa8.74□□□□□ -1.01
SYNPO2-204ENST00000448416 GID4Q8IVV7 300 aa8.74□□□□□ -1.01
SYNPO2-204ENST00000448416 TEX19Q8NA77 164 aa8.74□□□□□ -1.01
SYNPO2-204ENST00000448416 OR2T33Q8NG76 320 aa8.74□□□□□ -1.01
SYNPO2-204ENST00000448416 STK35Q8TDR2 534 aa8.74□□□□□ -1.01
SYNPO2-204ENST00000448416 NEIL2Q969S2 332 aa8.74□□□□□ -1.01
SYNPO2-204ENST00000448416 UFSP2Q9NUQ7 469 aa8.74□□□□□ -1.01
SYNPO2-204ENST00000448416 STOX2Q9P2F5 926 aaPredicted RBP8.74□□□□□ -1.01
SYNPO2-204ENST00000448416 P2RX2Q9UBL9 471 aa8.74□□□□□ -1.01
SYNPO2-204ENST00000448416 THSD7AQ9UPZ6 1657 aa8.74□□□□□ -1.01
SYNPO2-204ENST00000448416 PCDH8O95206 1070 aa8.74□□□□□ -1.01
SYNPO2-204ENST00000448416 HEXAP06865 529 aa8.74□□□□□ -1.01
SYNPO2-204ENST00000448416 LAG3P18627 525 aa8.74□□□□□ -1.01
SYNPO2-204ENST00000448416 PPT1P50897 306 aa8.74□□□□□ -1.01
SYNPO2-204ENST00000448416 SGSHP51688 502 aa8.74□□□□□ -1.01
SYNPO2-204ENST00000448416 OR12D2P58182 307 aa8.74□□□□□ -1.01
SYNPO2-204ENST00000448416 RPE65Q16518 533 aa8.74□□□□□ -1.01
SYNPO2-204ENST00000448416 C4orf46Q504U0 113 aa8.74□□□□□ -1.01
SYNPO2-204ENST00000448416 TMEM69Q5SWH9 247 aa8.74□□□□□ -1.01
SYNPO2-204ENST00000448416 FCRLAQ7L513 359 aa8.74□□□□□ -1.01
SYNPO2-204ENST00000448416 MRPL10Q7Z7H8 261 aaKnown RBP8.74□□□□□ -1.01
SYNPO2-204ENST00000448416 APOBEC3FQ8IUX4 373 aaKnown RBP8.74□□□□□ -1.01
SYNPO2-204ENST00000448416 MISPQ8IVT2 679 aa8.74□□□□□ -1.01
SYNPO2-204ENST00000448416 SPSB2Q99619 263 aa8.74□□□□□ -1.01
SYNPO2-204ENST00000448416 MRPL17Q9NRX2 175 aaKnown RBP8.74□□□□□ -1.01
SYNPO2-204ENST00000448416 ZNF821O75541 412 aaPredicted RBP8.73□□□□□ -1.01
SYNPO2-204ENST00000448416 KLK3P07288 261 aaPredicted RBP8.73□□□□□ -1.01
SYNPO2-204ENST00000448416 ABOP16442 354 aa8.73□□□□□ -1.01
SYNPO2-204ENST00000448416 GPX4P36969 197 aaPredicted RBP8.73□□□□□ -1.01
SYNPO2-204ENST00000448416 ADH7P40394 386 aa8.73□□□□□ -1.01
SYNPO2-204ENST00000448416 NRG3P56975 720 aa8.73□□□□□ -1.01
SYNPO2-204ENST00000448416 CBFBQ13951 182 aa8.73□□□□□ -1.01
SYNPO2-204ENST00000448416 MRPL58Q14197 206 aaKnown RBP8.73□□□□□ -1.01
SYNPO2-204ENST00000448416 GPNMBQ14956 572 aa8.73□□□□□ -1.01
SYNPO2-204ENST00000448416 MPPED2Q15777 294 aa8.73□□□□□ -1.01
SYNPO2-204ENST00000448416 CSRP2Q16527 193 aa8.73□□□□□ -1.01
SYNPO2-204ENST00000448416 CCSMST1Q4G0I0 132 aa8.73□□□□□ -1.01
SYNPO2-204ENST00000448416 PLEKHS1Q5SXH7 462 aa8.73□□□□□ -1.01
SYNPO2-204ENST00000448416 PIP5KL1Q5T9C9 394 aa8.73□□□□□ -1.01
SYNPO2-204ENST00000448416 MEPCEQ7L2J0 689 aaKnown RBP8.73□□□□□ -1.01
SYNPO2-204ENST00000448416 OR5P2Q8WZ92 322 aa8.73□□□□□ -1.01
SYNPO2-204ENST00000448416 S100A16Q96FQ6 103 aaKnown RBP8.73□□□□□ -1.01
SYNPO2-204ENST00000448416 TRMT2BQ96GJ1 504 aaKnown RBP8.73□□□□□ -1.01
SYNPO2-204ENST00000448416 ZDHHC12Q96GR4 267 aa8.73□□□□□ -1.01
SYNPO2-204ENST00000448416 SUSD3Q96L08 255 aa8.73□□□□□ -1.01
SYNPO2-204ENST00000448416 PGLYRP3Q96LB9 341 aa8.73□□□□□ -1.01
SYNPO2-204ENST00000448416 TMEM231Q9H6L2 316 aa8.73□□□□□ -1.01
SYNPO2-204ENST00000448416 MOKQ9UQ07 419 aa8.73□□□□□ -1.01
SYNPO2-204ENST00000448416 LTBP3Q9NS15 1303 aa8.73□□□□□ -1.01
SYNPO2-204ENST00000448416 PAPPA2Q9BXP8 1791 aa8.73□□□□□ -1.01
SYNPO2-204ENST00000448416 OR6C76A6NM76 312 aa8.73□□□□□ -1.01
SYNPO2-204ENST00000448416 CPSF4LA6NMK7 179 aaKnown RBP8.73□□□□□ -1.01
SYNPO2-204ENST00000448416 C2orf74A8MZ97 194 aa8.73□□□□□ -1.01
SYNPO2-204ENST00000448416 MTX2O75431 263 aa8.73□□□□□ -1.01
SYNPO2-204ENST00000448416 RB1P06400 928 aa8.73□□□□□ -1.01
SYNPO2-204ENST00000448416 ABCD3P28288 659 aa8.73□□□□□ -1.01
SYNPO2-204ENST00000448416 P2RX1P51575 399 aa8.73□□□□□ -1.01
SYNPO2-204ENST00000448416 TLE2Q04725 743 aa8.73□□□□□ -1.01
SYNPO2-204ENST00000448416 SLBPQ14493 270 aaKnown RBP eCLIP8.73□□□□□ -1.01
SYNPO2-204ENST00000448416 BEST3Q8N1M1 668 aa8.73□□□□□ -1.01
SYNPO2-204ENST00000448416 KCNRGQ8N5I3 272 aa8.73□□□□□ -1.01
SYNPO2-204ENST00000448416 OR5J2Q8NH18 312 aa8.73□□□□□ -1.01
SYNPO2-204ENST00000448416 PHYHIPLQ96FC7 376 aa8.73□□□□□ -1.01
SYNPO2-204ENST00000448416 TMEM41AQ96HV5 264 aa8.73□□□□□ -1.01
SYNPO2-204ENST00000448416 SAMD8Q96LT4 415 aa8.73□□□□□ -1.01
SYNPO2-204ENST00000448416 SLC13A4Q9UKG4 626 aa8.73□□□□□ -1.01
SYNPO2-204ENST00000448416 ICKQ9UPZ9 632 aa8.73□□□□□ -1.01
SYNPO2-204ENST00000448416 WDR90Q96KV7 1748 aa8.73□□□□□ -1.01
SYNPO2-204ENST00000448416 ZNF705EA8MWA4 302 aaPredicted RBP8.73□□□□□ -1.01
SYNPO2-204ENST00000448416 ZNF749O43361 778 aa8.73□□□□□ -1.01
SYNPO2-204ENST00000448416 SNAI1O95863 264 aaPredicted RBP8.73□□□□□ -1.01
SYNPO2-204ENST00000448416 DDX6P26196 483 aaKnown RBP eCLIP8.73□□□□□ -1.01
SYNPO2-204ENST00000448416 FAUP35544 74 aaKnown RBP8.73□□□□□ -1.01
SYNPO2-204ENST00000448416 MNDAP41218 407 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms