RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 KLHL9Q9P2J3 617 aa12.93□□□□□ -0.34
VPS52-212ENST00000445902 PLCL2Q9UPR0 1127 aa12.93□□□□□ -0.34
VPS52-212ENST00000445902 KLF2Q9Y5W3 355 aaPredicted RBP12.93□□□□□ -0.34
VPS52-212ENST00000445902 KIAA1549LQ6ZVL6 1849 aa12.93□□□□□ -0.34
VPS52-212ENST00000445902 COL4A3Q01955 1670 aa12.92□□□□□ -0.34
VPS52-212ENST00000445902 H0YC42 278 aa12.92□□□□□ -0.34
VPS52-212ENST00000445902 GLAP06280 429 aa12.92□□□□□ -0.34
VPS52-212ENST00000445902 FRKP42685 505 aaPredicted RBP12.92□□□□□ -0.34
VPS52-212ENST00000445902 SERTAD2Q14140 314 aa12.92□□□□□ -0.34
VPS52-212ENST00000445902 ASTLQ6HA08 431 aaPredicted RBP12.92□□□□□ -0.34
VPS52-212ENST00000445902 THSD4Q6ZMP0 1018 aa12.92□□□□□ -0.34
VPS52-212ENST00000445902 NUDT13Q86X67 352 aa12.92□□□□□ -0.34
VPS52-212ENST00000445902 FCAMRQ8WWV6 532 aa12.92□□□□□ -0.34
VPS52-212ENST00000445902 CASD1Q96PB1 797 aa12.92□□□□□ -0.34
VPS52-212ENST00000445902 GPN1Q9HCN4 374 aaPredicted RBP12.92□□□□□ -0.34
VPS52-212ENST00000445902 BCL2L10Q9HD36 194 aa12.92□□□□□ -0.34
VPS52-212ENST00000445902 TAS2R10Q9NYW0 307 aa12.92□□□□□ -0.34
VPS52-212ENST00000445902 TAS2R5Q9NYW4 299 aa12.92□□□□□ -0.34
VPS52-212ENST00000445902 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.92□□□□□ -0.34
VPS52-212ENST00000445902 ARPC4-TTLL3A0A0A6YYG9 625 aa12.92□□□□□ -0.34
VPS52-212ENST00000445902 A0A0G2JPF8 293 aa12.92□□□□□ -0.34
VPS52-212ENST00000445902 ACOD1A6NK06 481 aa12.92□□□□□ -0.34
VPS52-212ENST00000445902 HNRNPCL3B7ZW38 293 aa12.92□□□□□ -0.34
VPS52-212ENST00000445902 GPR31O00270 319 aa12.92□□□□□ -0.34
VPS52-212ENST00000445902 OR1F1O43749 312 aa12.92□□□□□ -0.34
VPS52-212ENST00000445902 HNRNPCL4P0DMR1 293 aa12.92□□□□□ -0.34
VPS52-212ENST00000445902 MAKP20794 623 aa12.92□□□□□ -0.34
VPS52-212ENST00000445902 PSMB10P40306 273 aa12.92□□□□□ -0.34
VPS52-212ENST00000445902 GDI2P50395 445 aaKnown RBP12.92□□□□□ -0.34
VPS52-212ENST00000445902 NRG3P56975 720 aa12.92□□□□□ -0.34
VPS52-212ENST00000445902 POLR2LP62875 67 aaKnown RBP12.92□□□□□ -0.34
VPS52-212ENST00000445902 MAT1AQ00266 395 aaKnown RBP12.92□□□□□ -0.34
VPS52-212ENST00000445902 TGM3Q08188 693 aa12.92□□□□□ -0.34
VPS52-212ENST00000445902 PABPC1L2AQ5JQF8 200 aa12.92□□□□□ -0.34
VPS52-212ENST00000445902 SLC6A19Q695T7 634 aa12.92□□□□□ -0.34
VPS52-212ENST00000445902 DMKNQ6E0U4 476 aaPredicted RBP12.92□□□□□ -0.34
VPS52-212ENST00000445902 MBOAT2Q6ZWT7 520 aa12.92□□□□□ -0.34
VPS52-212ENST00000445902 C1orf216Q8TAB5 229 aa12.92□□□□□ -0.34
VPS52-212ENST00000445902 SLC25A38Q96DW6 304 aa12.92□□□□□ -0.34
VPS52-212ENST00000445902 GIMAP5Q96F15 307 aa12.92□□□□□ -0.34
VPS52-212ENST00000445902 OR7D2Q96RA2 312 aa12.92□□□□□ -0.34
VPS52-212ENST00000445902 JAM3Q9BX67 310 aa12.92□□□□□ -0.34
VPS52-212ENST00000445902 TMEM138Q9NPI0 162 aa12.92□□□□□ -0.34
VPS52-212ENST00000445902 LHX6Q9UPM6 363 aa12.92□□□□□ -0.34
VPS52-212ENST00000445902 PSMD9O00233 223 aa12.91□□□□□ -0.34
VPS52-212ENST00000445902 NDUFS4O43181 175 aa12.91□□□□□ -0.34
VPS52-212ENST00000445902 KLF4O43474 513 aa12.91□□□□□ -0.34
VPS52-212ENST00000445902 ZIC2O95409 532 aaPredicted RBP12.91□□□□□ -0.34
VPS52-212ENST00000445902 SBK2P0C263 348 aa12.91□□□□□ -0.34
VPS52-212ENST00000445902 CPN1P15169 458 aa12.91□□□□□ -0.34
VPS52-212ENST00000445902 SSR2P43308 183 aa12.91□□□□□ -0.34
VPS52-212ENST00000445902 TAS2R38P59533 333 aa12.91□□□□□ -0.34
VPS52-212ENST00000445902 DECR1Q16698 335 aa12.91□□□□□ -0.34
VPS52-212ENST00000445902 C9orf64Q5T6V5 341 aa12.91□□□□□ -0.34
VPS52-212ENST00000445902 FAM199XQ6PEV8 388 aaPredicted RBP12.91□□□□□ -0.34
VPS52-212ENST00000445902 OR52L1Q8NGH7 329 aa12.91□□□□□ -0.34
VPS52-212ENST00000445902 FIBINQ8TAL6 211 aa12.91□□□□□ -0.34
VPS52-212ENST00000445902 BRIX1Q8TDN6 353 aaKnown RBP12.91□□□□□ -0.34
VPS52-212ENST00000445902 C2CD4CQ8TF44 421 aa12.91□□□□□ -0.34
VPS52-212ENST00000445902 TIFAQ96CG3 184 aa12.91□□□□□ -0.34
VPS52-212ENST00000445902 ZNF689Q96CS4 500 aaPredicted RBP12.91□□□□□ -0.34
VPS52-212ENST00000445902 SCLYQ96I15 445 aa12.91□□□□□ -0.34
VPS52-212ENST00000445902 ARHGDIGQ99819 225 aa12.91□□□□□ -0.34
VPS52-212ENST00000445902 TMPRSS13Q9BYE2 586 aa12.91□□□□□ -0.34
VPS52-212ENST00000445902 MFFQ9GZY8 342 aa12.91□□□□□ -0.34
VPS52-212ENST00000445902 ADGRL4Q9HBW9 690 aa12.91□□□□□ -0.34
VPS52-212ENST00000445902 SLC6A5Q9Y345 797 aa12.91□□□□□ -0.34
VPS52-212ENST00000445902 SNRNP200O75643 2136 aaKnown RBP12.91□□□□□ -0.34
VPS52-212ENST00000445902 TRAV27A0A087WT01 109 aa12.91□□□□□ -0.34
VPS52-212ENST00000445902 ANKRD61A6NGH8 418 aa12.91□□□□□ -0.34
VPS52-212ENST00000445902 UNC119BA6NIH7 251 aa12.91□□□□□ -0.34
VPS52-212ENST00000445902 ABCD4O14678 606 aa12.91□□□□□ -0.34
VPS52-212ENST00000445902 ATG12O94817 140 aa12.91□□□□□ -0.34
VPS52-212ENST00000445902 NAA10P41227 235 aaPredicted RBP12.91□□□□□ -0.34
VPS52-212ENST00000445902 FGL1Q08830 312 aa12.91□□□□□ -0.34
VPS52-212ENST00000445902 UBXN2BQ14CS0 331 aa12.91□□□□□ -0.34
VPS52-212ENST00000445902 TMEM69Q5SWH9 247 aa12.91□□□□□ -0.34
VPS52-212ENST00000445902 UBE3DQ7Z6J8 389 aa12.91□□□□□ -0.34
VPS52-212ENST00000445902 C17orf64Q86WR6 236 aa12.91□□□□□ -0.34
VPS52-212ENST00000445902 CBLN2Q8IUK8 224 aa12.91□□□□□ -0.34
VPS52-212ENST00000445902 OR13C2Q8NGS9 318 aa12.91□□□□□ -0.34
VPS52-212ENST00000445902 OR2A12Q8NGT7 310 aa12.91□□□□□ -0.34
VPS52-212ENST00000445902 OR51A7Q8NH64 312 aa12.91□□□□□ -0.34
VPS52-212ENST00000445902 PNPLA2Q96AD5 504 aa12.91□□□□□ -0.34
VPS52-212ENST00000445902 PURGQ9UJV8 347 aaKnown RBP12.91□□□□□ -0.34
VPS52-212ENST00000445902 MOKQ9UQ07 419 aa12.91□□□□□ -0.34
VPS52-212ENST00000445902 DNAH14Q0VDD8 3507 aa12.91□□□□□ -0.34
VPS52-212ENST00000445902 ABHD14A-ACY1A0A1B0GW23 586 aa12.9□□□□□ -0.34
VPS52-212ENST00000445902 F8W036 122 aa12.9□□□□□ -0.34
VPS52-212ENST00000445902 GABARAPH6UMI1 98 aa12.9□□□□□ -0.34
VPS52-212ENST00000445902 PCDH8O95206 1070 aa12.9□□□□□ -0.34
VPS52-212ENST00000445902 ASGR2P07307 311 aa12.9□□□□□ -0.34
VPS52-212ENST00000445902 BMP7P18075 431 aa12.9□□□□□ -0.34
VPS52-212ENST00000445902 NT5EP21589 574 aa12.9□□□□□ -0.34
VPS52-212ENST00000445902 NTSP30990 170 aa12.9□□□□□ -0.34
VPS52-212ENST00000445902 MC3RP41968 323 aa12.9□□□□□ -0.34
VPS52-212ENST00000445902 PDX1P52945 283 aa12.9□□□□□ -0.34
VPS52-212ENST00000445902 CRMP1Q14194 572 aa12.9□□□□□ -0.34
VPS52-212ENST00000445902 TRAM1Q15629 374 aa12.9□□□□□ -0.34
VPS52-212ENST00000445902 SLC8B1Q6J4K2 584 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms