RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 MED17Q9NVC6 651 aa13.16□□□□□ -0.3
ERCC3-203ENST00000445889 RCE1Q9Y256 329 aa13.16□□□□□ -0.3
ERCC3-203ENST00000445889 RPS10-NUDT3A0A1W2PQS6 291 aa13.15□□□□□ -0.3
ERCC3-203ENST00000445889 ZNF593O00488 134 aaPredicted RBP13.15□□□□□ -0.3
ERCC3-203ENST00000445889 ADAM11O75078 769 aa13.15□□□□□ -0.3
ERCC3-203ENST00000445889 LAMP2P13473 410 aa13.15□□□□□ -0.3
ERCC3-203ENST00000445889 POLR2CP19387 275 aaPredicted RBP13.15□□□□□ -0.3
ERCC3-203ENST00000445889 DRD3P35462 400 aa13.15□□□□□ -0.3
ERCC3-203ENST00000445889 VEGFCP49767 419 aa13.15□□□□□ -0.3
ERCC3-203ENST00000445889 TRA2BP62995 288 aaKnown RBP13.15□□□□□ -0.3
ERCC3-203ENST00000445889 PUDPQ08623 228 aa13.15□□□□□ -0.3
ERCC3-203ENST00000445889 IRF4Q15306 451 aa13.15□□□□□ -0.3
ERCC3-203ENST00000445889 TMEM44Q2T9K0 475 aa13.15□□□□□ -0.3
ERCC3-203ENST00000445889 COL28A1Q2UY09 1125 aa13.15□□□□□ -0.3
ERCC3-203ENST00000445889 GPR139Q6DWJ6 353 aa13.15□□□□□ -0.3
ERCC3-203ENST00000445889 OR52E2Q8NGJ4 325 aa13.15□□□□□ -0.3
ERCC3-203ENST00000445889 OR2T4Q8NH00 348 aa13.15□□□□□ -0.3
ERCC3-203ENST00000445889 CAPNS2Q96L46 248 aa13.15□□□□□ -0.3
ERCC3-203ENST00000445889 DDOQ99489 341 aa13.15□□□□□ -0.3
ERCC3-203ENST00000445889 RDH8Q9NYR8 311 aa13.15□□□□□ -0.3
ERCC3-203ENST00000445889 UBQLN2Q9UHD9 624 aa13.15□□□□□ -0.3
ERCC3-203ENST00000445889 SCML1Q9UN30 329 aa13.15□□□□□ -0.3
ERCC3-203ENST00000445889 F5P12259 2224 aa13.15□□□□□ -0.3
ERCC3-203ENST00000445889 ACOD1A6NK06 481 aa13.15□□□□□ -0.3
ERCC3-203ENST00000445889 C4orf47A7E2U8 309 aa13.15□□□□□ -0.3
ERCC3-203ENST00000445889 PLPP2O43688 288 aa13.15□□□□□ -0.3
ERCC3-203ENST00000445889 NFATC1O95644 943 aa13.15□□□□□ -0.3
ERCC3-203ENST00000445889 IFNA7P01567 189 aa13.15□□□□□ -0.3
ERCC3-203ENST00000445889 PROS1P07225 676 aa13.15□□□□□ -0.3
ERCC3-203ENST00000445889 AK4P27144 223 aaPredicted RBP13.15□□□□□ -0.3
ERCC3-203ENST00000445889 PTGS2P35354 604 aa13.15□□□□□ -0.3
ERCC3-203ENST00000445889 TMEM35AQ53FP2 167 aa13.15□□□□□ -0.3
ERCC3-203ENST00000445889 RTL4Q6ZR62 310 aa13.15□□□□□ -0.3
ERCC3-203ENST00000445889 GID4Q8IVV7 300 aa13.15□□□□□ -0.3
ERCC3-203ENST00000445889 LSMEM1Q8N8F7 131 aa13.15□□□□□ -0.3
ERCC3-203ENST00000445889 OR4C6Q8NH72 309 aa13.15□□□□□ -0.3
ERCC3-203ENST00000445889 LGALS14Q8TCE9 139 aa13.15□□□□□ -0.3
ERCC3-203ENST00000445889 SFXN5Q8TD22 340 aa13.15□□□□□ -0.3
ERCC3-203ENST00000445889 RELTQ969Z4 430 aa13.15□□□□□ -0.3
ERCC3-203ENST00000445889 DPP7Q9UHL4 492 aa13.15□□□□□ -0.3
ERCC3-203ENST00000445889 NUP50Q9UKX7 468 aa13.15□□□□□ -0.3
ERCC3-203ENST00000445889 ABHD14A-ACY1A0A1B0GW23 586 aa13.14□□□□□ -0.31
ERCC3-203ENST00000445889 SLC31A1O15431 190 aa13.14□□□□□ -0.31
ERCC3-203ENST00000445889 PRKNO60260 465 aaPredicted RBP13.14□□□□□ -0.31
ERCC3-203ENST00000445889 LINC00271P0C7V0 271 aa13.14□□□□□ -0.31
ERCC3-203ENST00000445889 GDNFP39905 211 aa13.14□□□□□ -0.31
ERCC3-203ENST00000445889 RAB14P61106 215 aa13.14□□□□□ -0.31
ERCC3-203ENST00000445889 NOGQ13253 232 aa13.14□□□□□ -0.31
ERCC3-203ENST00000445889 GJD3Q8N144 294 aa13.14□□□□□ -0.31
ERCC3-203ENST00000445889 RAB42Q8N4Z0 105 aa13.14□□□□□ -0.31
ERCC3-203ENST00000445889 MS4A15Q8N5U1 240 aa13.14□□□□□ -0.31
ERCC3-203ENST00000445889 ADAMTS14Q8WXS8 1223 aa13.14□□□□□ -0.31
ERCC3-203ENST00000445889 DNAJA3Q96EY1 480 aa13.14□□□□□ -0.31
ERCC3-203ENST00000445889 C1QTNF7Q9BXJ2 289 aa13.14□□□□□ -0.31
ERCC3-203ENST00000445889 SEMA4CQ9C0C4 833 aa13.14□□□□□ -0.31
ERCC3-203ENST00000445889 ADAM18Q9Y3Q7 739 aa13.14□□□□□ -0.31
ERCC3-203ENST00000445889 GXYLT2A0PJZ3 443 aa13.14□□□□□ -0.31
ERCC3-203ENST00000445889 FAM86C2PA6NEL3 165 aa13.14□□□□□ -0.31
ERCC3-203ENST00000445889 ADH1CP00326 375 aa13.14□□□□□ -0.31
ERCC3-203ENST00000445889 TFP02787 698 aa13.14□□□□□ -0.31
ERCC3-203ENST00000445889 GAAP10253 952 aa13.14□□□□□ -0.31
ERCC3-203ENST00000445889 EPXP11678 715 aa13.14□□□□□ -0.31
ERCC3-203ENST00000445889 HSD17B2P37059 387 aa13.14□□□□□ -0.31
ERCC3-203ENST00000445889 TSPAN5P62079 268 aa13.14□□□□□ -0.31
ERCC3-203ENST00000445889 MFSD13AQ14CX5 517 aa13.14□□□□□ -0.31
ERCC3-203ENST00000445889 TMEM52BQ4KMG9 183 aa13.14□□□□□ -0.31
ERCC3-203ENST00000445889 OTPQ5XKR4 325 aa13.14□□□□□ -0.31
ERCC3-203ENST00000445889 ADAMTSL4Q6UY14 1074 aa13.14□□□□□ -0.31
ERCC3-203ENST00000445889 VN1R4Q7Z5H5 301 aa13.14□□□□□ -0.31
ERCC3-203ENST00000445889 ETFBKMTQ8IXQ9 262 aa13.14□□□□□ -0.31
ERCC3-203ENST00000445889 LRRC25Q8N386 305 aaPredicted RBP13.14□□□□□ -0.31
ERCC3-203ENST00000445889 OR5T3Q8NGG3 340 aa13.14□□□□□ -0.31
ERCC3-203ENST00000445889 KCTD12Q96CX2 325 aaKnown RBP13.14□□□□□ -0.31
ERCC3-203ENST00000445889 NKX3-1Q99801 234 aaPredicted RBP13.14□□□□□ -0.31
ERCC3-203ENST00000445889 TMEM168Q9H0V1 697 aa13.14□□□□□ -0.31
ERCC3-203ENST00000445889 CACYBPQ9HB71 228 aaKnown RBP13.14□□□□□ -0.31
ERCC3-203ENST00000445889 GNG8Q9UK08 70 aa13.14□□□□□ -0.31
ERCC3-203ENST00000445889 ZNF223Q9UK11 482 aaPredicted RBP13.14□□□□□ -0.31
ERCC3-203ENST00000445889 TBX21Q9UL17 535 aa13.14□□□□□ -0.31
ERCC3-203ENST00000445889 CA5BQ9Y2D0 317 aa13.14□□□□□ -0.31
ERCC3-203ENST00000445889 TRAPPC13A5PLN9 417 aa13.13□□□□□ -0.31
ERCC3-203ENST00000445889 M0R233 179 aa13.13□□□□□ -0.31
ERCC3-203ENST00000445889 POU3F2P20265 443 aaPredicted RBP13.13□□□□□ -0.31
ERCC3-203ENST00000445889 NDUFS1P28331 727 aa13.13□□□□□ -0.31
ERCC3-203ENST00000445889 SLC25A25Q6KCM7 469 aa13.13□□□□□ -0.31
ERCC3-203ENST00000445889 PSRC1Q6PGN9 363 aaPredicted RBP13.13□□□□□ -0.31
ERCC3-203ENST00000445889 NLRC3Q7RTR2 1065 aa13.13□□□□□ -0.31
ERCC3-203ENST00000445889 NRROSQ86YC3 692 aa13.13□□□□□ -0.31
ERCC3-203ENST00000445889 CMTM4Q8IZR5 234 aa13.13□□□□□ -0.31
ERCC3-203ENST00000445889 UXS1Q8NBZ7 420 aa13.13□□□□□ -0.31
ERCC3-203ENST00000445889 CCL4L1Q8NHW4 92 aa13.13□□□□□ -0.31
ERCC3-203ENST00000445889 MRPL39Q9NYK5 338 aaKnown RBP13.13□□□□□ -0.31
ERCC3-203ENST00000445889 SIGLEC7Q9Y286 467 aa13.13□□□□□ -0.31
ERCC3-203ENST00000445889 MRPS2Q9Y399 296 aaKnown RBP13.13□□□□□ -0.31
ERCC3-203ENST00000445889 MEIKINA0A087WXM9 373 aa13.13□□□□□ -0.31
ERCC3-203ENST00000445889 A0A1B0GVT2 93 aa13.13□□□□□ -0.31
ERCC3-203ENST00000445889 NUPL2O15504 423 aaKnown RBP13.13□□□□□ -0.31
ERCC3-203ENST00000445889 UBL3O95164 117 aa13.13□□□□□ -0.31
ERCC3-203ENST00000445889 ALDOBP05062 364 aa13.13□□□□□ -0.31
ERCC3-203ENST00000445889 NGFRP08138 427 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms