RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 STX19Q8N4C7 294 aa2.59□□□□□ -1.99
LINC00393-201ENST00000443621 MS4A15Q8N5U1 240 aa2.59□□□□□ -1.99
LINC00393-201ENST00000443621 DEFB119Q8N690 84 aa2.59□□□□□ -1.99
LINC00393-201ENST00000443621 ESX1Q8N693 406 aa2.59□□□□□ -1.99
LINC00393-201ENST00000443621 EID2Q8N6I1 236 aa2.59□□□□□ -1.99
LINC00393-201ENST00000443621 AMER2Q8N7J2 671 aa2.59□□□□□ -1.99
LINC00393-201ENST00000443621 NANOGP1Q8N7R0 232 aa2.59□□□□□ -1.99
LINC00393-201ENST00000443621 TEX19Q8NA77 164 aa2.59□□□□□ -1.99
LINC00393-201ENST00000443621 ANKK1Q8NFD2 765 aa2.59□□□□□ -1.99
LINC00393-201ENST00000443621 BPIFB6Q8NFQ5 453 aa2.59□□□□□ -1.99
LINC00393-201ENST00000443621 OR9Q2Q8NGE9 314 aa2.59□□□□□ -1.99
LINC00393-201ENST00000443621 OR2T27Q8NH04 317 aa2.59□□□□□ -1.99
LINC00393-201ENST00000443621 OR4C3Q8NH37 302 aa2.59□□□□□ -1.99
LINC00393-201ENST00000443621 OR52J3Q8NH60 311 aa2.59□□□□□ -1.99
LINC00393-201ENST00000443621 MFSD8Q8NHS3 518 aa2.59□□□□□ -1.99
LINC00393-201ENST00000443621 VANGL1Q8TAA9 524 aaPredicted RBP2.59□□□□□ -1.99
LINC00393-201ENST00000443621 RHBDD1Q8TEB9 315 aa2.59□□□□□ -1.99
LINC00393-201ENST00000443621 SLC25A43Q8WUT9 341 aaPredicted RBP2.59□□□□□ -1.99
LINC00393-201ENST00000443621 PIK3R3Q92569 461 aa2.59□□□□□ -1.99
LINC00393-201ENST00000443621 GGHQ92820 318 aa2.59□□□□□ -1.99
LINC00393-201ENST00000443621 UCN3Q969E3 161 aa2.59□□□□□ -1.99
LINC00393-201ENST00000443621 GTPBP3Q969Y2 492 aaKnown RBP2.59□□□□□ -1.99
LINC00393-201ENST00000443621 RELTQ969Z4 430 aa2.59□□□□□ -1.99
LINC00393-201ENST00000443621 ZBTB8AQ96BR9 441 aa2.59□□□□□ -1.99
LINC00393-201ENST00000443621 C3orf49Q96BT1 292 aa2.59□□□□□ -1.99
LINC00393-201ENST00000443621 PPP1R14BQ96C90 147 aa2.59□□□□□ -1.99
LINC00393-201ENST00000443621 ISOC1Q96CN7 298 aa2.59□□□□□ -1.99
LINC00393-201ENST00000443621 NMD3Q96D46 503 aaKnown RBP2.59□□□□□ -1.99
LINC00393-201ENST00000443621 LGALS12Q96DT0 336 aa2.59□□□□□ -1.99
LINC00393-201ENST00000443621 CLIP3Q96DZ5 547 aa2.59□□□□□ -1.99
LINC00393-201ENST00000443621 YIPF6Q96EC8 236 aa2.59□□□□□ -1.99
LINC00393-201ENST00000443621 SGTBQ96EQ0 304 aa2.59□□□□□ -1.99
LINC00393-201ENST00000443621 PLEKHA8Q96JA3 519 aa2.59□□□□□ -1.99
LINC00393-201ENST00000443621 IMMP1LQ96LU5 166 aa2.59□□□□□ -1.99
LINC00393-201ENST00000443621 CCDC74BQ96LY2 380 aa2.59□□□□□ -1.99
LINC00393-201ENST00000443621 CMTM3Q96MX0 182 aa2.59□□□□□ -1.99
LINC00393-201ENST00000443621 DEPDC7Q96QD5 511 aa2.59□□□□□ -1.99
LINC00393-201ENST00000443621 IL4I1Q96RQ9 567 aa2.59□□□□□ -1.99
LINC00393-201ENST00000443621 MGLLQ99685 303 aa2.59□□□□□ -1.99
LINC00393-201ENST00000443621 WDR77Q9BQA1 342 aaPredicted RBP2.59□□□□□ -1.99
LINC00393-201ENST00000443621 YIPF4Q9BSR8 244 aa2.59□□□□□ -1.99
LINC00393-201ENST00000443621 WACQ9BTA9 647 aa2.59□□□□□ -1.99
LINC00393-201ENST00000443621 MED18Q9BUE0 208 aa2.59□□□□□ -1.99
LINC00393-201ENST00000443621 CNPPD1Q9BV87 410 aa2.59□□□□□ -1.99
LINC00393-201ENST00000443621 REPIN1Q9BWE0 567 aaKnown RBP2.59□□□□□ -1.99
LINC00393-201ENST00000443621 TAPBPLQ9BX59 468 aa2.59□□□□□ -1.99
LINC00393-201ENST00000443621 NXF2Q9GZY0 626 aaKnown RBP2.59□□□□□ -1.99
LINC00393-201ENST00000443621 NXF5Q9H1B4 397 aaKnown RBP2.59□□□□□ -1.99
LINC00393-201ENST00000443621 MMP27Q9H306 513 aa2.59□□□□□ -1.99
LINC00393-201ENST00000443621 OR52D1Q9H346 318 aa2.59□□□□□ -1.99
LINC00393-201ENST00000443621 UBQLN3Q9H347 655 aa2.59□□□□□ -1.99
LINC00393-201ENST00000443621 PTGES2Q9H7Z7 377 aa2.59□□□□□ -1.99
LINC00393-201ENST00000443621 MARCH7Q9H992 704 aa2.59□□□□□ -1.99
LINC00393-201ENST00000443621 TMEM9BQ9NQ34 198 aa2.59□□□□□ -1.99
LINC00393-201ENST00000443621 NRIP3Q9NQ35 241 aa2.59□□□□□ -1.99
LINC00393-201ENST00000443621 EQTNQ9NQ60 294 aa2.59□□□□□ -1.99
LINC00393-201ENST00000443621 SERINC1Q9NRX5 453 aa2.59□□□□□ -1.99
LINC00393-201ENST00000443621 SLC22A11Q9NSA0 550 aa2.59□□□□□ -1.99
LINC00393-201ENST00000443621 SEMA4GQ9NTN9 838 aa2.59□□□□□ -1.99
LINC00393-201ENST00000443621 RLIMQ9NVW2 624 aa2.59□□□□□ -1.99
LINC00393-201ENST00000443621 ASB6Q9NWX5 421 aa2.59□□□□□ -1.99
LINC00393-201ENST00000443621 IRAK4Q9NWZ3 460 aa2.59□□□□□ -1.99
LINC00393-201ENST00000443621 QPCTLQ9NXS2 382 aa2.59□□□□□ -1.99
LINC00393-201ENST00000443621 MRPL39Q9NYK5 338 aaKnown RBP2.59□□□□□ -1.99
LINC00393-201ENST00000443621 ZNF226Q9NYT6 803 aa2.59□□□□□ -1.99
LINC00393-201ENST00000443621 HCN3Q9P1Z3 774 aa2.59□□□□□ -1.99
LINC00393-201ENST00000443621 MYOTQ9UBF9 498 aa2.59□□□□□ -1.99
LINC00393-201ENST00000443621 RPS6KB2Q9UBS0 482 aa2.59□□□□□ -1.99
LINC00393-201ENST00000443621 GPN3Q9UHW5 284 aaPredicted RBP2.59□□□□□ -1.99
LINC00393-201ENST00000443621 POLHQ9Y253 713 aa2.59□□□□□ -1.99
LINC00393-201ENST00000443621 B3GNT3Q9Y2A9 372 aa2.59□□□□□ -1.99
LINC00393-201ENST00000443621 B3GALT5Q9Y2C3 310 aa2.59□□□□□ -1.99
LINC00393-201ENST00000443621 SSUH2Q9Y2M2 353 aa2.59□□□□□ -1.99
LINC00393-201ENST00000443621 CAB39Q9Y376 341 aaPredicted RBP2.59□□□□□ -1.99
LINC00393-201ENST00000443621 HDGFL3Q9Y3E1 203 aa2.59□□□□□ -1.99
LINC00393-201ENST00000443621 UGT2A1Q9Y4X1 527 aa2.59□□□□□ -1.99
LINC00393-201ENST00000443621 NPFFR2Q9Y5X5 522 aa2.59□□□□□ -1.99
LINC00393-201ENST00000443621 TMEM14AQ9Y6G1 99 aa2.59□□□□□ -1.99
LINC00393-201ENST00000443621 V9GYQ6 96 aa2.59□□□□□ -1.99
LINC00393-201ENST00000443621 EXPH5Q8NEV8 1989 aa2.59□□□□□ -2
LINC00393-201ENST00000443621 CABIN1Q9Y6J0 2220 aa2.58□□□□□ -2
LINC00393-201ENST00000443621 TRAV36DV7A0A075B6V5 113 aa2.58□□□□□ -2
LINC00393-201ENST00000443621 IGHV1-45A0A0A0MS14 117 aa2.58□□□□□ -2
LINC00393-201ENST00000443621 TNFSF12-TNFSF13A0A0A6YY99 330 aa2.58□□□□□ -2
LINC00393-201ENST00000443621 TRDV1A0A1B0GX56 115 aa2.58□□□□□ -2
LINC00393-201ENST00000443621 A0A1W2PNV4 684 aa2.58□□□□□ -2
LINC00393-201ENST00000443621 A0A1W2PS29 197 aa2.58□□□□□ -2
LINC00393-201ENST00000443621 CPED1A4D0V7 1026 aa2.58□□□□□ -2
LINC00393-201ENST00000443621 SLC35F4A4IF30 521 aa2.58□□□□□ -2
LINC00393-201ENST00000443621 A6NIZ1 184 aa2.58□□□□□ -2
LINC00393-201ENST00000443621 TMEM200CA6NKL6 621 aa2.58□□□□□ -2
LINC00393-201ENST00000443621 ELOA3DA6NLF2 546 aaPredicted RBP2.58□□□□□ -2
LINC00393-201ENST00000443621 CPSF4LA6NMK7 179 aaKnown RBP2.58□□□□□ -2
LINC00393-201ENST00000443621 GJE1A6NN92 205 aa2.58□□□□□ -2
LINC00393-201ENST00000443621 EFCAB9A8MZ26 197 aa2.58□□□□□ -2
LINC00393-201ENST00000443621 FAM47E-STBD1D6RA91 191 aa2.58□□□□□ -2
LINC00393-201ENST00000443621 PTGES3LE9PB15 166 aa2.58□□□□□ -2
LINC00393-201ENST00000443621 PRR23D1E9PI22 279 aaPredicted RBP2.58□□□□□ -2
LINC00393-201ENST00000443621 H3BMQ9 156 aa2.58□□□□□ -2
LINC00393-201ENST00000443621 H3BSA7 217 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms