RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 LIN52Q52LA3 116 aa18.79■□□□□ 0.6
CDKN3-204ENST00000442975 ANKRD34AQ69YU3 496 aa18.79■□□□□ 0.6
CDKN3-204ENST00000442975 SLC25A43Q8WUT9 341 aaPredicted RBP18.79■□□□□ 0.6
CDKN3-204ENST00000442975 ZC3HAV1LQ96H79 300 aaKnown RBP18.79■□□□□ 0.6
CDKN3-204ENST00000442975 WFIKKN1Q96NZ8 548 aa18.79■□□□□ 0.6
CDKN3-204ENST00000442975 PAIP1Q9H074 479 aaKnown RBP18.79■□□□□ 0.6
CDKN3-204ENST00000442975 NPHS2Q9NP85 383 aa18.79■□□□□ 0.6
CDKN3-204ENST00000442975 CALML5Q9NZT1 146 aa18.79■□□□□ 0.6
CDKN3-204ENST00000442975 C6orf203Q9P0P8 240 aaPredicted RBP18.79■□□□□ 0.6
CDKN3-204ENST00000442975 CHRNA9Q9UGM1 479 aa18.79■□□□□ 0.6
CDKN3-204ENST00000442975 DCTN4Q9UJW0 460 aa18.79■□□□□ 0.6
CDKN3-204ENST00000442975 PLEKHA6Q9Y2H5 1048 aa18.79■□□□□ 0.6
CDKN3-204ENST00000442975 PCDHB14Q9Y5E9 798 aa18.79■□□□□ 0.6
CDKN3-204ENST00000442975 MED12LQ86YW9 2145 aa18.79■□□□□ 0.6
CDKN3-204ENST00000442975 PCNX3Q9H6A9 2034 aa18.78■□□□□ 0.6
CDKN3-204ENST00000442975 A0A096LPI6 279 aa18.78■□□□□ 0.6
CDKN3-204ENST00000442975 HRGP04196 525 aa18.78■□□□□ 0.6
CDKN3-204ENST00000442975 FESP07332 822 aa18.78■□□□□ 0.6
CDKN3-204ENST00000442975 UQCRBP14927 111 aa18.78■□□□□ 0.6
CDKN3-204ENST00000442975 RAC3P60763 192 aa18.78■□□□□ 0.6
CDKN3-204ENST00000442975 MAPK11Q15759 364 aa18.78■□□□□ 0.6
CDKN3-204ENST00000442975 AGKQ53H12 422 aa18.78■□□□□ 0.6
CDKN3-204ENST00000442975 AP1ARQ63HQ0 302 aa18.78■□□□□ 0.6
CDKN3-204ENST00000442975 BLOC1S3Q6QNY0 202 aa18.78■□□□□ 0.6
CDKN3-204ENST00000442975 LSRQ86X29 649 aaPredicted RBP18.78■□□□□ 0.6
CDKN3-204ENST00000442975 VRK2Q86Y07 508 aa18.78■□□□□ 0.6
CDKN3-204ENST00000442975 FUNDC1Q8IVP5 155 aa18.78■□□□□ 0.6
CDKN3-204ENST00000442975 TUSC5Q8IXB3 177 aa18.78■□□□□ 0.6
CDKN3-204ENST00000442975 OR52P1PQ8NH57 321 aa18.78■□□□□ 0.6
CDKN3-204ENST00000442975 SLC38A5Q8WUX1 472 aa18.78■□□□□ 0.6
CDKN3-204ENST00000442975 CCDC106Q9BWC9 280 aa18.78■□□□□ 0.6
CDKN3-204ENST00000442975 RLIMQ9NVW2 624 aa18.78■□□□□ 0.6
CDKN3-204ENST00000442975 ST6GALNAC2Q9UJ37 374 aa18.78■□□□□ 0.6
CDKN3-204ENST00000442975 DSPPQ9NZW4 1301 aa18.77■□□□□ 0.6
CDKN3-204ENST00000442975 CFAP73A6NFT4 308 aa18.77■□□□□ 0.6
CDKN3-204ENST00000442975 CLIC1O00299 241 aa18.77■□□□□ 0.6
CDKN3-204ENST00000442975 PRKD3O94806 890 aa18.77■□□□□ 0.6
CDKN3-204ENST00000442975 GOSR1O95249 250 aa18.77■□□□□ 0.6
CDKN3-204ENST00000442975 NUDT7P0C024 238 aa18.77■□□□□ 0.6
CDKN3-204ENST00000442975 TFPTP0C1Z6 253 aa18.77■□□□□ 0.6
CDKN3-204ENST00000442975 NCF2P19878 526 aaPredicted RBP18.77■□□□□ 0.6
CDKN3-204ENST00000442975 KLK2P20151 261 aa18.77■□□□□ 0.6
CDKN3-204ENST00000442975 APOBEC1P41238 236 aaKnown RBP18.77■□□□□ 0.6
CDKN3-204ENST00000442975 DIO1P49895 249 aa18.77■□□□□ 0.6
CDKN3-204ENST00000442975 ART1P52961 327 aa18.77■□□□□ 0.6
CDKN3-204ENST00000442975 ZNF836Q6ZNA1 936 aa18.77■□□□□ 0.6
CDKN3-204ENST00000442975 MAL2Q969L2 176 aa18.77■□□□□ 0.6
CDKN3-204ENST00000442975 OR11A1Q9GZK7 315 aa18.77■□□□□ 0.6
CDKN3-204ENST00000442975 RAD21L1Q9H4I0 556 aa18.77■□□□□ 0.6
CDKN3-204ENST00000442975 FANCFQ9NPI8 374 aa18.77■□□□□ 0.6
CDKN3-204ENST00000442975 PLSCR4Q9NRQ2 329 aa18.77■□□□□ 0.6
CDKN3-204ENST00000442975 THUMPD1Q9NXG2 353 aaKnown RBP18.77■□□□□ 0.6
CDKN3-204ENST00000442975 ZNF226Q9NYT6 803 aa18.77■□□□□ 0.6
CDKN3-204ENST00000442975 KLHL9Q9P2J3 617 aa18.77■□□□□ 0.6
CDKN3-204ENST00000442975 ZNF443Q9Y2A4 671 aaPredicted RBP18.77■□□□□ 0.6
CDKN3-204ENST00000442975 C5orf58C9J3I9 102 aa18.76■□□□□ 0.59
CDKN3-204ENST00000442975 SULT2B1O00204 365 aa18.76■□□□□ 0.59
CDKN3-204ENST00000442975 SMAD9O15198 467 aaKnown RBP18.76■□□□□ 0.59
CDKN3-204ENST00000442975 PCYT1AP49585 367 aa18.76■□□□□ 0.59
CDKN3-204ENST00000442975 ATP4BP51164 291 aa18.76■□□□□ 0.59
CDKN3-204ENST00000442975 CSNK2A1P68400 391 aaPredicted RBP18.76■□□□□ 0.59
CDKN3-204ENST00000442975 RGNQ15493 299 aa18.76■□□□□ 0.59
CDKN3-204ENST00000442975 BEND4Q6ZU67 534 aa18.76■□□□□ 0.59
CDKN3-204ENST00000442975 NUFIP2Q7Z417 695 aaKnown RBP18.76■□□□□ 0.59
CDKN3-204ENST00000442975 SLC43A2Q8N370 569 aa18.76■□□□□ 0.59
CDKN3-204ENST00000442975 PMM1Q92871 262 aa18.76■□□□□ 0.59
CDKN3-204ENST00000442975 CCM2LQ9NUG4 571 aaPredicted RBP18.76■□□□□ 0.59
CDKN3-204ENST00000442975 SLC25A37Q9NYZ2 338 aa18.76■□□□□ 0.59
CDKN3-204ENST00000442975 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.76■□□□□ 0.59
CDKN3-204ENST00000442975 A0A0G2JND7 137 aa18.75■□□□□ 0.59
CDKN3-204ENST00000442975 EDF1O60869 148 aaKnown RBP18.75■□□□□ 0.59
CDKN3-204ENST00000442975 GKN3PP0CG01 181 aa18.75■□□□□ 0.59
CDKN3-204ENST00000442975 HOXB9P17482 250 aaPredicted RBP18.75■□□□□ 0.59
CDKN3-204ENST00000442975 DNASE1P24855 282 aa18.75■□□□□ 0.59
CDKN3-204ENST00000442975 HTR3AP46098 478 aa18.75■□□□□ 0.59
CDKN3-204ENST00000442975 POLR2HP52434 150 aaKnown RBP18.75■□□□□ 0.59
CDKN3-204ENST00000442975 IST1P53990 364 aa18.75■□□□□ 0.59
CDKN3-204ENST00000442975 RASGEF1BQ0VAM2 473 aa18.75■□□□□ 0.59
CDKN3-204ENST00000442975 EPS8Q12929 822 aa18.75■□□□□ 0.59
CDKN3-204ENST00000442975 FADDQ13158 208 aa18.75■□□□□ 0.59
CDKN3-204ENST00000442975 LARS2Q15031 903 aaKnown RBP18.75■□□□□ 0.59
CDKN3-204ENST00000442975 PAGE3Q5JUK9 113 aa18.75■□□□□ 0.59
CDKN3-204ENST00000442975 PAMR1Q6UXH9 720 aa18.75■□□□□ 0.59
CDKN3-204ENST00000442975 TFAP2EQ6VUC0 442 aa18.75■□□□□ 0.59
CDKN3-204ENST00000442975 STAC2Q6ZMT1 411 aa18.75■□□□□ 0.59
CDKN3-204ENST00000442975 TMPPEQ6ZT21 453 aa18.75■□□□□ 0.59
CDKN3-204ENST00000442975 MSRB3Q8IXL7 192 aa18.75■□□□□ 0.59
CDKN3-204ENST00000442975 ZHX1-C8orf76Q96EF9 292 aa18.75■□□□□ 0.59
CDKN3-204ENST00000442975 PIK3IP1Q96FE7 263 aa18.75■□□□□ 0.59
CDKN3-204ENST00000442975 TACO1Q9BSH4 297 aaKnown RBP18.75■□□□□ 0.59
CDKN3-204ENST00000442975 GP6Q9HCN6 339 aa18.75■□□□□ 0.59
CDKN3-204ENST00000442975 A4GALTQ9NPC4 353 aa18.75■□□□□ 0.59
CDKN3-204ENST00000442975 SLAMF8Q9P0V8 285 aa18.75■□□□□ 0.59
CDKN3-204ENST00000442975 EDARQ9UNE0 448 aa18.75■□□□□ 0.59
CDKN3-204ENST00000442975 TRIM33Q9UPN9 1127 aa18.75■□□□□ 0.59
CDKN3-204ENST00000442975 HRNRQ86YZ3 2850 aaPredicted RBP18.75■□□□□ 0.59
CDKN3-204ENST00000442975 TMED7-TICAM2A0A0A6YYA0 188 aa18.74■□□□□ 0.59
CDKN3-204ENST00000442975 CDHR4A6H8M9 788 aa18.74■□□□□ 0.59
CDKN3-204ENST00000442975 YES1P07947 543 aa18.74■□□□□ 0.59
CDKN3-204ENST00000442975 CD1EP15812 388 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms