RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 OR10G2Q8NGC3 310 aa6.79□□□□□ -1.32
CDC42BPA-208ENST00000442054 MCFD2Q8NI22 146 aa6.79□□□□□ -1.32
CDC42BPA-208ENST00000442054 C16orf78Q8WTQ4 265 aa6.79□□□□□ -1.32
CDC42BPA-208ENST00000442054 ZHX1-C8orf76Q96EF9 292 aa6.79□□□□□ -1.32
CDC42BPA-208ENST00000442054 PIP5K1AQ99755 562 aa6.79□□□□□ -1.32
CDC42BPA-208ENST00000442054 MCCC2Q9HCC0 563 aa6.79□□□□□ -1.32
CDC42BPA-208ENST00000442054 A4GALTQ9NPC4 353 aa6.79□□□□□ -1.32
CDC42BPA-208ENST00000442054 CORO2BQ9UQ03 480 aa6.79□□□□□ -1.32
CDC42BPA-208ENST00000442054 SCN3AQ9NY46 2000 aa6.79□□□□□ -1.32
CDC42BPA-208ENST00000442054 ZNF292O60281 2723 aa6.79□□□□□ -1.32
CDC42BPA-208ENST00000442054 A0A1W2PPV9 198 aa6.79□□□□□ -1.32
CDC42BPA-208ENST00000442054 SAGE2PA6NJ88 616 aa6.79□□□□□ -1.32
CDC42BPA-208ENST00000442054 CCL21O00585 134 aa6.79□□□□□ -1.32
CDC42BPA-208ENST00000442054 ADAMDEC1O15204 470 aa6.79□□□□□ -1.32
CDC42BPA-208ENST00000442054 SUV39H1O43463 412 aa6.79□□□□□ -1.32
CDC42BPA-208ENST00000442054 PRAMEF2O60811 474 aa6.79□□□□□ -1.32
CDC42BPA-208ENST00000442054 MFN2O95140 757 aa6.79□□□□□ -1.32
CDC42BPA-208ENST00000442054 WDPCPO95876 746 aa6.79□□□□□ -1.32
CDC42BPA-208ENST00000442054 HLA-DQB1P01920 261 aa6.79□□□□□ -1.32
CDC42BPA-208ENST00000442054 ANXA8P13928 327 aa6.79□□□□□ -1.32
CDC42BPA-208ENST00000442054 DRD2P14416 443 aa6.79□□□□□ -1.32
CDC42BPA-208ENST00000442054 PPIBP23284 216 aaKnown RBP6.79□□□□□ -1.32
CDC42BPA-208ENST00000442054 HTR3AP46098 478 aa6.79□□□□□ -1.32
CDC42BPA-208ENST00000442054 OR1E2P47887 323 aa6.79□□□□□ -1.32
CDC42BPA-208ENST00000442054 SOX8P57073 446 aa6.79□□□□□ -1.32
CDC42BPA-208ENST00000442054 PPIAP62937 165 aaKnown RBP6.79□□□□□ -1.32
CDC42BPA-208ENST00000442054 RUNX2Q13950 521 aa6.79□□□□□ -1.32
CDC42BPA-208ENST00000442054 C3P1Q6ZMU1 363 aa6.79□□□□□ -1.32
CDC42BPA-208ENST00000442054 PPP1R32Q7Z5V6 425 aa6.79□□□□□ -1.32
CDC42BPA-208ENST00000442054 HPS1Q92902 700 aa6.79□□□□□ -1.32
CDC42BPA-208ENST00000442054 Q96MT0 163 aa6.79□□□□□ -1.32
CDC42BPA-208ENST00000442054 NDUFB11Q9NX14 153 aa6.79□□□□□ -1.32
CDC42BPA-208ENST00000442054 CAMK2AQ9UQM7 478 aa6.79□□□□□ -1.32
CDC42BPA-208ENST00000442054 RPH3AQ9Y2J0 694 aaPredicted RBP6.79□□□□□ -1.32
CDC42BPA-208ENST00000442054 ATG4BQ9Y4P1 393 aa6.79□□□□□ -1.32
CDC42BPA-208ENST00000442054 HEATR5BQ9P2D3 2071 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 ABCA4P78363 2273 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 FIGNL2A6NMB9 653 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 M0R3G1 203 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 TNFRSF11BO00300 401 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 SCDO00767 359 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 GPR37O15354 613 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 LGI1O95970 557 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 SSTR4P31391 388 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 GABRA3P34903 492 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 RPS19P39019 145 aaKnown RBP6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 GSSP48637 474 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 EIF2B2P49770 351 aaKnown RBP6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 TNFRSF17Q02223 184 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 FUT5Q11128 374 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 MFAP5Q13361 173 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 SLC10A1Q14973 349 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 ANXA8L1Q5VT79 327 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 PLAG1Q6DJT9 500 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 VASNQ6EMK4 673 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 LCN10Q6JVE6 187 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 CD200R1LQ6Q8B3 271 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 RRM2BQ7LG56 351 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 EXD3Q8N9H8 876 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 PHOSPHO1Q8TCT1 267 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 CA5BP1Q8WTZ4 195 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 NACC2Q96BF6 587 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 MTERF3Q96E29 417 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 C10orf90Q96M02 699 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 ADOQ96SZ5 270 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 SPSB2Q99619 263 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 GPA33Q99795 319 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 CCDC90BQ9GZT6 254 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 CXorf36Q9H7Y0 433 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 NT5DC2Q9H857 520 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 PLEKHB1Q9UF11 243 aaPredicted RBP6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 ITGB1BP2Q9UKP3 347 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 ORC6Q9Y5N6 252 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 ENPP4Q9Y6X5 453 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 TRBV4-1A0A0J9YWV2 114 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 AP3D1O14617 1153 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 FOXS1O43638 330 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 PRKRAO75569 313 aaKnown RBP6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 SNRNP200O75643 2136 aaKnown RBP6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 AIFM1O95831 613 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 IGFBP1P08833 259 aaPredicted RBP6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 CRATP43155 626 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 MYBPHQ13203 477 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 ARMCX4Q5H9R4 360 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 SPATC1Q76KD6 591 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 UBE3DQ7Z6J8 389 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 NANOGP1Q8N7R0 232 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 ANKRD53Q8N9V6 530 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 GATSQ8NAP1 163 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 C11orf65Q8NCR3 313 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 MORN4Q8NDC4 146 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 NFKBIDQ8NI38 313 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 NEURL3Q96EH8 262 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 TIMP4Q99727 224 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 SRRQ9GZT4 340 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 SLC35C2Q9NQQ7 365 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 ASF1BQ9NVP2 202 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 KLHL28Q9NXS3 571 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 A4GNTQ9UNA3 340 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms