RNA–Protein interactions for RNA: ENST00000439987.6

IFT140-204, Transcript of intraflagellar transport 140, humanhuman

TSL 2

Gene IFT140, Length 2,580 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-204ENST00000439987 COPZ1P61923 177 aa13.69□□□□□ -0.22
IFT140-204ENST00000439987 PLCXD2Q0VAA5 305 aa13.69□□□□□ -0.22
IFT140-204ENST00000439987 UBE2UQ5VVX9 321 aa13.69□□□□□ -0.22
IFT140-204ENST00000439987 MEDAGQ5VYS4 303 aa13.69□□□□□ -0.22
IFT140-204ENST00000439987 SLC30A6Q6NXT4 461 aa13.69□□□□□ -0.22
IFT140-204ENST00000439987 LINC00114Q6XXX2 140 aa13.69□□□□□ -0.22
IFT140-204ENST00000439987 BCDIN3DQ7Z5W3 292 aaKnown RBP13.69□□□□□ -0.22
IFT140-204ENST00000439987 SLC22A16Q86VW1 577 aa13.69□□□□□ -0.22
IFT140-204ENST00000439987 SLC34A3Q8N130 599 aa13.69□□□□□ -0.22
IFT140-204ENST00000439987 PHOSPHO1Q8TCT1 267 aa13.69□□□□□ -0.22
IFT140-204ENST00000439987 FCGR1BQ92637 280 aa13.69□□□□□ -0.22
IFT140-204ENST00000439987 LRR1Q96L50 414 aa13.69□□□□□ -0.22
IFT140-204ENST00000439987 SEMA4CQ9C0C4 833 aa13.69□□□□□ -0.22
IFT140-204ENST00000439987 ZNF229Q9UJW7 825 aa13.69□□□□□ -0.22
IFT140-204ENST00000439987 RPL36Q9Y3U8 105 aaKnown RBP13.69□□□□□ -0.22
IFT140-204ENST00000439987 R4GN57 208 aa13.69□□□□□ -0.22
IFT140-204ENST00000439987 CENPBD1B2RD01 187 aa13.69□□□□□ -0.22
IFT140-204ENST00000439987 TSPAN2O60636 221 aa13.69□□□□□ -0.22
IFT140-204ENST00000439987 ICOSLGO75144 302 aa13.69□□□□□ -0.22
IFT140-204ENST00000439987 RFPL3O75679 317 aa13.69□□□□□ -0.22
IFT140-204ENST00000439987 LCKP06239 509 aa13.69□□□□□ -0.22
IFT140-204ENST00000439987 PSMB9P28065 219 aa13.69□□□□□ -0.22
IFT140-204ENST00000439987 MC2RQ01718 297 aa13.69□□□□□ -0.22
IFT140-204ENST00000439987 SKP2Q13309 424 aa13.69□□□□□ -0.22
IFT140-204ENST00000439987 SYT14P1Q58G82 188 aa13.69□□□□□ -0.22
IFT140-204ENST00000439987 DESI1Q6ICB0 168 aa13.69□□□□□ -0.22
IFT140-204ENST00000439987 AMER2Q8N7J2 671 aa13.69□□□□□ -0.22
IFT140-204ENST00000439987 APCDD1LQ8NCL9 501 aa13.69□□□□□ -0.22
IFT140-204ENST00000439987 NFAM1Q8NET5 270 aaPredicted RBP13.69□□□□□ -0.22
IFT140-204ENST00000439987 OR4Q3Q8NH05 313 aa13.69□□□□□ -0.22
IFT140-204ENST00000439987 TMEM163Q8TC26 289 aa13.69□□□□□ -0.22
IFT140-204ENST00000439987 BRIX1Q8TDN6 353 aaKnown RBP13.69□□□□□ -0.22
IFT140-204ENST00000439987 TEX12Q9BXU0 123 aa13.69□□□□□ -0.22
IFT140-204ENST00000439987 AKIRIN1Q9H9L7 192 aaPredicted RBP13.69□□□□□ -0.22
IFT140-204ENST00000439987 SIAEQ9HAT2 523 aa13.69□□□□□ -0.22
IFT140-204ENST00000439987 UGT2A1Q9Y4X1 527 aa13.69□□□□□ -0.22
IFT140-204ENST00000439987 BMP4P12644 408 aa13.68□□□□□ -0.22
IFT140-204ENST00000439987 ZNF28P17035 718 aa13.68□□□□□ -0.22
IFT140-204ENST00000439987 FUT1P19526 365 aa13.68□□□□□ -0.22
IFT140-204ENST00000439987 ABCD3P28288 659 aa13.68□□□□□ -0.22
IFT140-204ENST00000439987 ST13P50502 369 aaKnown RBP13.68□□□□□ -0.22
IFT140-204ENST00000439987 ARPC4P59998 168 aa13.68□□□□□ -0.22
IFT140-204ENST00000439987 RNF4P78317 190 aa13.68□□□□□ -0.22
IFT140-204ENST00000439987 PLAG1Q6DJT9 500 aa13.68□□□□□ -0.22
IFT140-204ENST00000439987 MRPL14Q6P1L8 145 aaKnown RBP13.68□□□□□ -0.22
IFT140-204ENST00000439987 OR2T33Q8NG76 320 aa13.68□□□□□ -0.22
IFT140-204ENST00000439987 FANK1Q8TC84 345 aa13.68□□□□□ -0.22
IFT140-204ENST00000439987 DNAJA4Q8WW22 397 aaPredicted RBP13.68□□□□□ -0.22
IFT140-204ENST00000439987 OMA1Q96E52 524 aa13.68□□□□□ -0.22
IFT140-204ENST00000439987 SAMD8Q96LT4 415 aa13.68□□□□□ -0.22
IFT140-204ENST00000439987 CRB3Q9BUF7 120 aa13.68□□□□□ -0.22
IFT140-204ENST00000439987 OR52D1Q9H346 318 aa13.68□□□□□ -0.22
IFT140-204ENST00000439987 EXOSC3Q9NQT5 275 aaKnown RBP13.68□□□□□ -0.22
IFT140-204ENST00000439987 IL20RAQ9UHF4 553 aa13.68□□□□□ -0.22
IFT140-204ENST00000439987 PPIEQ9UNP9 301 aaKnown RBP13.68□□□□□ -0.22
IFT140-204ENST00000439987 ZNF264O43296 627 aa13.68□□□□□ -0.22
IFT140-204ENST00000439987 TPD52L2O43399 206 aaKnown RBP13.68□□□□□ -0.22
IFT140-204ENST00000439987 OIP5O43482 229 aa13.68□□□□□ -0.22
IFT140-204ENST00000439987 NGFRP08138 427 aa13.68□□□□□ -0.22
IFT140-204ENST00000439987 TCEA1P23193 301 aaKnown RBP13.68□□□□□ -0.22
IFT140-204ENST00000439987 FXYD6P3P58550 94 aa13.68□□□□□ -0.22
IFT140-204ENST00000439987 ZNF91Q05481 1191 aa13.68□□□□□ -0.22
IFT140-204ENST00000439987 IRF3Q14653 427 aa13.68□□□□□ -0.22
IFT140-204ENST00000439987 PGGHGQ32M88 737 aa13.68□□□□□ -0.22
IFT140-204ENST00000439987 TUBA3EQ6PEY2 450 aa13.68□□□□□ -0.22
IFT140-204ENST00000439987 CHAC2Q8WUX2 184 aa13.68□□□□□ -0.22
IFT140-204ENST00000439987 ZNF486Q96H40 463 aaPredicted RBP13.68□□□□□ -0.22
IFT140-204ENST00000439987 ZNF582Q96NG8 517 aaPredicted RBP13.68□□□□□ -0.22
IFT140-204ENST00000439987 CDCA4Q9BXL8 241 aa13.68□□□□□ -0.22
IFT140-204ENST00000439987 CARD8Q9Y2G2 431 aa13.68□□□□□ -0.22
IFT140-204ENST00000439987 GTPBP1O00178 669 aaKnown RBP13.67□□□□□ -0.22
IFT140-204ENST00000439987 SAGP10523 405 aaPredicted RBP13.67□□□□□ -0.22
IFT140-204ENST00000439987 DBTP11182 482 aaKnown RBP13.67□□□□□ -0.22
IFT140-204ENST00000439987 PNLIPRP2P54317 469 aa13.67□□□□□ -0.22
IFT140-204ENST00000439987 PSPHP78330 225 aa13.67□□□□□ -0.22
IFT140-204ENST00000439987 CAMK2BQ13554 666 aa13.67□□□□□ -0.22
IFT140-204ENST00000439987 PAPD4Q6PIY7 484 aaKnown RBP13.67□□□□□ -0.22
IFT140-204ENST00000439987 CBLN3Q6UW01 205 aa13.67□□□□□ -0.22
IFT140-204ENST00000439987 HSDL2Q6YN16 418 aa13.67□□□□□ -0.22
IFT140-204ENST00000439987 WDR77Q9BQA1 342 aaPredicted RBP13.67□□□□□ -0.22
IFT140-204ENST00000439987 UBQLN3Q9H347 655 aa13.67□□□□□ -0.22
IFT140-204ENST00000439987 HHATLQ9HCP6 504 aa13.67□□□□□ -0.22
IFT140-204ENST00000439987 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.67□□□□□ -0.22
IFT140-204ENST00000439987 GPR52Q9Y2T5 361 aa13.67□□□□□ -0.22
IFT140-204ENST00000439987 SURF4O15260 269 aa13.67□□□□□ -0.22
IFT140-204ENST00000439987 CH25HO95992 272 aa13.67□□□□□ -0.22
IFT140-204ENST00000439987 CYC1P08574 325 aa13.67□□□□□ -0.22
IFT140-204ENST00000439987 ADRA2AP08913 450 aa13.67□□□□□ -0.22
IFT140-204ENST00000439987 RCVRNP35243 200 aa13.67□□□□□ -0.22
IFT140-204ENST00000439987 KRR1Q13601 381 aaKnown RBP13.67□□□□□ -0.22
IFT140-204ENST00000439987 ZNF181Q2M3W8 571 aa13.67□□□□□ -0.22
IFT140-204ENST00000439987 RPL13AP3Q6NVV1 102 aa13.67□□□□□ -0.22
IFT140-204ENST00000439987 TMEM205Q6UW68 189 aa13.67□□□□□ -0.22
IFT140-204ENST00000439987 CPEB2Q7Z5Q1 589 aaKnown RBP13.67□□□□□ -0.22
IFT140-204ENST00000439987 OR52L1Q8NGH7 329 aa13.67□□□□□ -0.22
IFT140-204ENST00000439987 C9orf43Q8TAL5 461 aaPredicted RBP13.67□□□□□ -0.22
IFT140-204ENST00000439987 TP53INP1Q96A56 240 aa13.67□□□□□ -0.22
IFT140-204ENST00000439987 C3orf49Q96BT1 292 aa13.67□□□□□ -0.22
IFT140-204ENST00000439987 DACH2Q96NX9 599 aa13.67□□□□□ -0.22
IFT140-204ENST00000439987 LPAR4Q99677 370 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms