RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 PRSS38A1L453 326 aa15.14■□□□□ 0.01
CLCNKA-203ENST00000439316 PTP4A3O75365 173 aa15.14■□□□□ 0.01
CLCNKA-203ENST00000439316 NTRK2Q16620 822 aa15.14■□□□□ 0.01
CLCNKA-203ENST00000439316 SLC36A2Q495M3 483 aa15.14■□□□□ 0.01
CLCNKA-203ENST00000439316 FAM205BPQ63HN1 556 aa15.14■□□□□ 0.01
CLCNKA-203ENST00000439316 CDK20Q8IZL9 346 aa15.14■□□□□ 0.01
CLCNKA-203ENST00000439316 COX18Q8N8Q8 333 aa15.14■□□□□ 0.01
CLCNKA-203ENST00000439316 SMPDL3BQ92485 455 aa15.14■□□□□ 0.01
CLCNKA-203ENST00000439316 HSD17B8Q92506 261 aa15.14■□□□□ 0.01
CLCNKA-203ENST00000439316 TTC9Q92623 222 aa15.14■□□□□ 0.01
CLCNKA-203ENST00000439316 C1QTNF7Q9BXJ2 289 aa15.14■□□□□ 0.01
CLCNKA-203ENST00000439316 GHITMQ9H3K2 345 aa15.14■□□□□ 0.01
CLCNKA-203ENST00000439316 MEPEQ9NQ76 525 aaPredicted RBP15.14■□□□□ 0.01
CLCNKA-203ENST00000439316 MRPL39Q9NYK5 338 aaKnown RBP15.14■□□□□ 0.01
CLCNKA-203ENST00000439316 CA14Q9ULX7 337 aa15.14■□□□□ 0.01
CLCNKA-203ENST00000439316 A0A1B0GVC2 190 aa15.13■□□□□ 0.01
CLCNKA-203ENST00000439316 A6NIN4 97 aa15.13■□□□□ 0.01
CLCNKA-203ENST00000439316 J3QLW9 94 aa15.13■□□□□ 0.01
CLCNKA-203ENST00000439316 FZD7O75084 574 aa15.13■□□□□ 0.01
CLCNKA-203ENST00000439316 DHFRP00374 187 aa15.13■□□□□ 0.01
CLCNKA-203ENST00000439316 SAGP10523 405 aaPredicted RBP15.13■□□□□ 0.01
CLCNKA-203ENST00000439316 CLUP10909 449 aa15.13■□□□□ 0.01
CLCNKA-203ENST00000439316 ZNF19P17023 458 aa15.13■□□□□ 0.01
CLCNKA-203ENST00000439316 SLC16A1P53985 500 aa15.13■□□□□ 0.01
CLCNKA-203ENST00000439316 NRG3P56975 720 aa15.13■□□□□ 0.01
CLCNKA-203ENST00000439316 OR12D2P58182 307 aa15.13■□□□□ 0.01
CLCNKA-203ENST00000439316 ACTC1P68032 377 aa15.13■□□□□ 0.01
CLCNKA-203ENST00000439316 ACTA1P68133 377 aa15.13■□□□□ 0.01
CLCNKA-203ENST00000439316 ID2Q02363 134 aa15.13■□□□□ 0.01
CLCNKA-203ENST00000439316 CRMP1Q14194 572 aa15.13■□□□□ 0.01
CLCNKA-203ENST00000439316 CDRT4Q8N9R6 151 aa15.13■□□□□ 0.01
CLCNKA-203ENST00000439316 OR5J2Q8NH18 312 aa15.13■□□□□ 0.01
CLCNKA-203ENST00000439316 MED28Q9H204 178 aa15.13■□□□□ 0.01
CLCNKA-203ENST00000439316 C14orf105Q9NVL8 296 aa15.13■□□□□ 0.01
CLCNKA-203ENST00000439316 ST6GALNAC2Q9UJ37 374 aa15.13■□□□□ 0.01
CLCNKA-203ENST00000439316 BAIAP2Q9UQB8 552 aa15.13■□□□□ 0.01
CLCNKA-203ENST00000439316 NPFFR2Q9Y5X5 522 aa15.13■□□□□ 0.01
CLCNKA-203ENST00000439316 DNAH14Q0VDD8 3507 aa15.13■□□□□ 0.01
CLCNKA-203ENST00000439316 GON4LQ3T8J9 2241 aa15.13■□□□□ 0.01
CLCNKA-203ENST00000439316 TRAV27A0A087WT01 109 aa15.13■□□□□ 0.01
CLCNKA-203ENST00000439316 FABP7O15540 132 aa15.13■□□□□ 0.01
CLCNKA-203ENST00000439316 NDUFB5O43674 189 aa15.13■□□□□ 0.01
CLCNKA-203ENST00000439316 CTSVO60911 334 aa15.13■□□□□ 0.01
CLCNKA-203ENST00000439316 ATP1B1P05026 303 aa15.13■□□□□ 0.01
CLCNKA-203ENST00000439316 ZNF3P17036 446 aa15.13■□□□□ 0.01
CLCNKA-203ENST00000439316 MAP3K8P41279 467 aa15.13■□□□□ 0.01
CLCNKA-203ENST00000439316 PPP2CBP62714 309 aa15.13■□□□□ 0.01
CLCNKA-203ENST00000439316 PPP2CAP67775 309 aa15.13■□□□□ 0.01
CLCNKA-203ENST00000439316 ANGPT1Q15389 498 aa15.13■□□□□ 0.01
CLCNKA-203ENST00000439316 ACSM3Q53FZ2 586 aa15.13■□□□□ 0.01
CLCNKA-203ENST00000439316 TMEM31Q5JXX7 168 aa15.13■□□□□ 0.01
CLCNKA-203ENST00000439316 FCRLBQ6BAA4 426 aa15.13■□□□□ 0.01
CLCNKA-203ENST00000439316 FAAH2Q6GMR7 532 aa15.13■□□□□ 0.01
CLCNKA-203ENST00000439316 ZNF613Q6PF04 617 aa15.13■□□□□ 0.01
CLCNKA-203ENST00000439316 RPTNQ6XPR3 784 aa15.13■□□□□ 0.01
CLCNKA-203ENST00000439316 MS4A15Q8N5U1 240 aa15.13■□□□□ 0.01
CLCNKA-203ENST00000439316 DOK4Q8TEW6 326 aa15.13■□□□□ 0.01
CLCNKA-203ENST00000439316 SLC22A18Q96BI1 424 aa15.13■□□□□ 0.01
CLCNKA-203ENST00000439316 PEX11GQ96HA9 241 aa15.13■□□□□ 0.01
CLCNKA-203ENST00000439316 TWSG1Q9GZX9 223 aa15.13■□□□□ 0.01
CLCNKA-203ENST00000439316 DPAGT1Q9H3H5 408 aa15.13■□□□□ 0.01
CLCNKA-203ENST00000439316 SRMSQ9H3Y6 488 aa15.13■□□□□ 0.01
CLCNKA-203ENST00000439316 EMC7Q9NPA0 242 aa15.13■□□□□ 0.01
CLCNKA-203ENST00000439316 KLHL1Q9NR64 748 aa15.13■□□□□ 0.01
CLCNKA-203ENST00000439316 ZNF624Q9P2J8 865 aaPredicted RBP15.13■□□□□ 0.01
CLCNKA-203ENST00000439316 NUBP2Q9Y5Y2 271 aa15.13■□□□□ 0.01
CLCNKA-203ENST00000439316 URADA6NGE7 173 aa15.12■□□□□ 0.01
CLCNKA-203ENST00000439316 SLC31A1O15431 190 aa15.12■□□□□ 0.01
CLCNKA-203ENST00000439316 TNFSF14O43557 240 aa15.12■□□□□ 0.01
CLCNKA-203ENST00000439316 HYAL3O43820 417 aaPredicted RBP15.12■□□□□ 0.01
CLCNKA-203ENST00000439316 RFPL3O75679 317 aa15.12■□□□□ 0.01
CLCNKA-203ENST00000439316 PPP1R3DO95685 299 aa15.12■□□□□ 0.01
CLCNKA-203ENST00000439316 AK1P00568 194 aa15.12■□□□□ 0.01
CLCNKA-203ENST00000439316 GABRG2P18507 467 aa15.12■□□□□ 0.01
CLCNKA-203ENST00000439316 RAB3BP20337 219 aa15.12■□□□□ 0.01
CLCNKA-203ENST00000439316 STOMP27105 288 aa15.12■□□□□ 0.01
CLCNKA-203ENST00000439316 ACVR1BP36896 505 aa15.12■□□□□ 0.01
CLCNKA-203ENST00000439316 POU4F2Q12837 409 aa15.12■□□□□ 0.01
CLCNKA-203ENST00000439316 KIR2DS3Q14952 304 aa15.12■□□□□ 0.01
CLCNKA-203ENST00000439316 ZCCHC12Q6PEW1 402 aa15.12■□□□□ 0.01
CLCNKA-203ENST00000439316 ZNF782Q6ZMW2 699 aaPredicted RBP15.12■□□□□ 0.01
CLCNKA-203ENST00000439316 SSX6Q7RTT6 188 aa15.12■□□□□ 0.01
CLCNKA-203ENST00000439316 OR4C6Q8NH72 309 aa15.12■□□□□ 0.01
CLCNKA-203ENST00000439316 HAVCR2Q8TDQ0 301 aa15.12■□□□□ 0.01
CLCNKA-203ENST00000439316 HMGB4Q8WW32 186 aa15.12■□□□□ 0.01
CLCNKA-203ENST00000439316 PMM1Q92871 262 aa15.12■□□□□ 0.01
CLCNKA-203ENST00000439316 YIPF5Q969M3 257 aa15.12■□□□□ 0.01
CLCNKA-203ENST00000439316 ZNF559Q9BR84 538 aa15.12■□□□□ 0.01
CLCNKA-203ENST00000439316 LYRM4Q9HD34 91 aa15.12■□□□□ 0.01
CLCNKA-203ENST00000439316 NUDT15Q9NV35 164 aa15.12■□□□□ 0.01
CLCNKA-203ENST00000439316 FBXL4Q9UKA2 621 aa15.12■□□□□ 0.01
CLCNKA-203ENST00000439316 FBXL21Q9UKT6 434 aa15.12■□□□□ 0.01
CLCNKA-203ENST00000439316 TRAV1-2A0A0B4J238 106 aa15.11■□□□□ 0.01
CLCNKA-203ENST00000439316 A0A0B4J2E0 115 aa15.11■□□□□ 0.01
CLCNKA-203ENST00000439316 A0A1B0GX12 115 aa15.11■□□□□ 0.01
CLCNKA-203ENST00000439316 LRRC72A6NJI9 287 aa15.11■□□□□ 0.01
CLCNKA-203ENST00000439316 UBL3O95164 117 aa15.11■□□□□ 0.01
CLCNKA-203ENST00000439316 SRP9P49458 86 aaKnown RBP15.11■□□□□ 0.01
CLCNKA-203ENST00000439316 TPMTP51580 245 aa15.11■□□□□ 0.01
CLCNKA-203ENST00000439316 P2RX3P56373 397 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms