RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 RPS26P11Q5JNZ5 115 aaPredicted RBP14.56□□□□□ -0.08
SMPD4-207ENST00000435455 GCNT6Q5T4J0 391 aa14.56□□□□□ -0.08
SMPD4-207ENST00000435455 RNF220Q5VTB9 566 aa14.56□□□□□ -0.08
SMPD4-207ENST00000435455 VWA1Q6PCB0 445 aa14.56□□□□□ -0.08
SMPD4-207ENST00000435455 DLEU7Q6UYE1 221 aa14.56□□□□□ -0.08
SMPD4-207ENST00000435455 FAM214BQ7L5A3 538 aa14.56□□□□□ -0.08
SMPD4-207ENST00000435455 GRINAQ7Z429 371 aa14.56□□□□□ -0.08
SMPD4-207ENST00000435455 DHDDSQ86SQ9 333 aa14.56□□□□□ -0.08
SMPD4-207ENST00000435455 VRK2Q86Y07 508 aa14.56□□□□□ -0.08
SMPD4-207ENST00000435455 GMPPAQ96IJ6 420 aaPredicted RBP14.56□□□□□ -0.08
SMPD4-207ENST00000435455 CCDC106Q9BWC9 280 aa14.56□□□□□ -0.08
SMPD4-207ENST00000435455 MCCC2Q9HCC0 563 aa14.56□□□□□ -0.08
SMPD4-207ENST00000435455 ZNF443Q9Y2A4 671 aaPredicted RBP14.56□□□□□ -0.08
SMPD4-207ENST00000435455 POLQO75417 2590 aa14.56□□□□□ -0.08
SMPD4-207ENST00000435455 ANKRD17O75179 2603 aaKnown RBP14.55□□□□□ -0.08
SMPD4-207ENST00000435455 CDHR4A6H8M9 788 aa14.55□□□□□ -0.08
SMPD4-207ENST00000435455 CFAP73A6NFT4 308 aa14.55□□□□□ -0.08
SMPD4-207ENST00000435455 SS18L1O75177 396 aaPredicted RBP14.55□□□□□ -0.08
SMPD4-207ENST00000435455 NUDT7P0C024 238 aa14.55□□□□□ -0.08
SMPD4-207ENST00000435455 CD8BP10966 210 aa14.55□□□□□ -0.08
SMPD4-207ENST00000435455 CD1EP15812 388 aa14.55□□□□□ -0.08
SMPD4-207ENST00000435455 GPX2P18283 190 aa14.55□□□□□ -0.08
SMPD4-207ENST00000435455 IDH2P48735 452 aaKnown RBP14.55□□□□□ -0.08
SMPD4-207ENST00000435455 PCYT1AP49585 367 aa14.55□□□□□ -0.08
SMPD4-207ENST00000435455 RAC3P60763 192 aa14.55□□□□□ -0.08
SMPD4-207ENST00000435455 CGB2Q6NT52 195 aa14.55□□□□□ -0.08
SMPD4-207ENST00000435455 REEP3Q6NUK4 255 aa14.55□□□□□ -0.08
SMPD4-207ENST00000435455 BTLAQ7Z6A9 289 aa14.55□□□□□ -0.08
SMPD4-207ENST00000435455 OR6K3Q8NGY3 331 aa14.55□□□□□ -0.08
SMPD4-207ENST00000435455 FAM222BQ8WU58 562 aa14.55□□□□□ -0.08
SMPD4-207ENST00000435455 MAL2Q969L2 176 aa14.55□□□□□ -0.08
SMPD4-207ENST00000435455 CPPED1Q9BRF8 314 aaPredicted RBP14.55□□□□□ -0.08
SMPD4-207ENST00000435455 SPATA9Q9BWV2 254 aa14.55□□□□□ -0.08
SMPD4-207ENST00000435455 TMEM38AQ9H6F2 299 aa14.55□□□□□ -0.08
SMPD4-207ENST00000435455 COQ10BQ9H8M1 238 aa14.55□□□□□ -0.08
SMPD4-207ENST00000435455 CTPS2Q9NRF8 586 aa14.55□□□□□ -0.08
SMPD4-207ENST00000435455 GALNT8Q9NY28 637 aa14.55□□□□□ -0.08
SMPD4-207ENST00000435455 CHRNA9Q9UGM1 479 aa14.55□□□□□ -0.08
SMPD4-207ENST00000435455 ADAM11O75078 769 aa14.54□□□□□ -0.08
SMPD4-207ENST00000435455 PGM3O95394 542 aa14.54□□□□□ -0.08
SMPD4-207ENST00000435455 ETS2P15036 469 aa14.54□□□□□ -0.08
SMPD4-207ENST00000435455 SLC1A3P43003 542 aa14.54□□□□□ -0.08
SMPD4-207ENST00000435455 CLK1P49759 484 aaKnown RBP14.54□□□□□ -0.08
SMPD4-207ENST00000435455 EPS8Q12929 822 aa14.54□□□□□ -0.08
SMPD4-207ENST00000435455 RNPS1Q15287 305 aaKnown RBP14.54□□□□□ -0.08
SMPD4-207ENST00000435455 SYT14P1Q58G82 188 aa14.54□□□□□ -0.08
SMPD4-207ENST00000435455 RUNDC3AQ59EK9 446 aa14.54□□□□□ -0.08
SMPD4-207ENST00000435455 ZNF311Q5JNZ3 666 aa14.54□□□□□ -0.08
SMPD4-207ENST00000435455 ZNF836Q6ZNA1 936 aa14.54□□□□□ -0.08
SMPD4-207ENST00000435455 ZNF550Q7Z398 422 aa14.54□□□□□ -0.08
SMPD4-207ENST00000435455 RETREG3Q86VR2 466 aa14.54□□□□□ -0.08
SMPD4-207ENST00000435455 KRT73Q86Y46 540 aa14.54□□□□□ -0.08
SMPD4-207ENST00000435455 SLC43A2Q8N370 569 aa14.54□□□□□ -0.08
SMPD4-207ENST00000435455 RNF128Q8TEB7 428 aa14.54□□□□□ -0.08
SMPD4-207ENST00000435455 OR5B2Q96R09 309 aa14.54□□□□□ -0.08
SMPD4-207ENST00000435455 CGREF1Q99674 301 aa14.54□□□□□ -0.08
SMPD4-207ENST00000435455 SLC39A3Q9BRY0 314 aa14.54□□□□□ -0.08
SMPD4-207ENST00000435455 SRXN1Q9BYN0 137 aa14.54□□□□□ -0.08
SMPD4-207ENST00000435455 GP6Q9HCN6 339 aa14.54□□□□□ -0.08
SMPD4-207ENST00000435455 RLIMQ9NVW2 624 aa14.54□□□□□ -0.08
SMPD4-207ENST00000435455 CRIM1Q9NZV1 1036 aa14.54□□□□□ -0.08
SMPD4-207ENST00000435455 KLHL14Q9P2G3 628 aa14.54□□□□□ -0.08
SMPD4-207ENST00000435455 CLEC4AQ9UMR7 237 aa14.54□□□□□ -0.08
SMPD4-207ENST00000435455 PROCRQ9UNN8 238 aa14.54□□□□□ -0.08
SMPD4-207ENST00000435455 MYO9AB2RTY4 2548 aa14.53□□□□□ -0.08
SMPD4-207ENST00000435455 SPG11Q96JI7 2443 aa14.53□□□□□ -0.08
SMPD4-207ENST00000435455 A0A1W2PNR3 127 aa14.53□□□□□ -0.08
SMPD4-207ENST00000435455 TUBAL3A6NHL2 446 aa14.53□□□□□ -0.08
SMPD4-207ENST00000435455 AP3D1O14617 1153 aa14.53□□□□□ -0.08
SMPD4-207ENST00000435455 CGAP01215 116 aa14.53□□□□□ -0.08
SMPD4-207ENST00000435455 TFPIP10646 304 aa14.53□□□□□ -0.08
SMPD4-207ENST00000435455 SLC6A2P23975 617 aa14.53□□□□□ -0.08
SMPD4-207ENST00000435455 CPOXP36551 454 aa14.53□□□□□ -0.08
SMPD4-207ENST00000435455 CD79BP40259 229 aa14.53□□□□□ -0.08
SMPD4-207ENST00000435455 POLR2HP52434 150 aaKnown RBP14.53□□□□□ -0.08
SMPD4-207ENST00000435455 MAP2K6P52564 334 aa14.53□□□□□ -0.08
SMPD4-207ENST00000435455 CSNK2A1P68400 391 aaPredicted RBP14.53□□□□□ -0.08
SMPD4-207ENST00000435455 CDK6Q00534 326 aa14.53□□□□□ -0.08
SMPD4-207ENST00000435455 NFYCQ13952 458 aa14.53□□□□□ -0.08
SMPD4-207ENST00000435455 MAPRE2Q15555 327 aa14.53□□□□□ -0.08
SMPD4-207ENST00000435455 FCRLAQ7L513 359 aa14.53□□□□□ -0.08
SMPD4-207ENST00000435455 NFKBIDQ8NI38 313 aa14.53□□□□□ -0.08
SMPD4-207ENST00000435455 ROBO4Q8WZ75 1007 aa14.53□□□□□ -0.08
SMPD4-207ENST00000435455 SLC35B4Q969S0 331 aa14.53□□□□□ -0.08
SMPD4-207ENST00000435455 LURAP1Q96LR2 239 aa14.53□□□□□ -0.08
SMPD4-207ENST00000435455 ANKRD27Q96NW4 1050 aa14.53□□□□□ -0.08
SMPD4-207ENST00000435455 ZNF317Q96PQ6 595 aaPredicted RBP14.53□□□□□ -0.08
SMPD4-207ENST00000435455 ZNF607Q96SK3 696 aa14.53□□□□□ -0.08
SMPD4-207ENST00000435455 TACO1Q9BSH4 297 aaKnown RBP14.53□□□□□ -0.08
SMPD4-207ENST00000435455 SPATA5L1Q9BVQ7 753 aa14.53□□□□□ -0.08
SMPD4-207ENST00000435455 OPN3Q9H1Y3 402 aaPredicted RBP14.53□□□□□ -0.08
SMPD4-207ENST00000435455 IKZF5Q9H5V7 419 aa14.53□□□□□ -0.08
SMPD4-207ENST00000435455 ELOVL5Q9NYP7 299 aa14.53□□□□□ -0.08
SMPD4-207ENST00000435455 HDGFL3Q9Y3E1 203 aa14.53□□□□□ -0.08
SMPD4-207ENST00000435455 PDZD2O15018 2839 aa14.52□□□□□ -0.08
SMPD4-207ENST00000435455 TMED7-TICAM2A0A0A6YYA0 188 aa14.52□□□□□ -0.09
SMPD4-207ENST00000435455 PRKD3O94806 890 aa14.52□□□□□ -0.09
SMPD4-207ENST00000435455 ENPP1P22413 925 aa14.52□□□□□ -0.09
SMPD4-207ENST00000435455 AGTR1P30556 359 aa14.52□□□□□ -0.09
SMPD4-207ENST00000435455 ADSLP30566 484 aaPredicted RBP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms