RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 SLC6A20Q9NP91 592 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 C20orf141Q9NUB4 165 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 BABAM2Q9NXR7 383 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 ZNF224Q9NZL3 707 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 KCND3Q9UK17 655 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 LIPT1Q9Y234 373 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 ZNF443Q9Y2A4 671 aaPredicted RBP7.48□□□□□ -1.21
HPS4-205ENST00000429411 MYO15AQ9UKN7 3530 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 C4orf51C9J302 202 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 TBX6O95947 436 aaPredicted RBP7.48□□□□□ -1.21
HPS4-205ENST00000429411 CISD3P0C7P0 127 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 SFTPCP11686 197 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 CPMP14384 443 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 ERP29P30040 261 aaKnown RBP7.48□□□□□ -1.21
HPS4-205ENST00000429411 DDOSTP39656 456 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 MAGEB1P43366 347 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 LIMS1P48059 325 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 ABATP80404 500 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 E2F1Q01094 437 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 ARHGAP19Q14CB8 494 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 ZNHIT3Q15649 155 aaPredicted RBP7.48□□□□□ -1.21
HPS4-205ENST00000429411 TMEM35AQ53FP2 167 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 ACSM3Q53FZ2 586 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 GPR135Q8IZ08 494 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 SGK3Q96BR1 496 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 BPIFA2Q96DR5 249 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 FOXN4Q96NZ1 517 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 RSPO3Q9BXY4 272 aaPredicted RBP7.48□□□□□ -1.21
HPS4-205ENST00000429411 ZNF717Q9BY31 904 aaPredicted RBP7.48□□□□□ -1.21
HPS4-205ENST00000429411 WNT5BQ9H1J7 359 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 B3GAT2Q9NPZ5 323 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 MAN2C1Q9NTJ4 1040 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 ZSCAN32Q9NX65 697 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 SIDT1Q9NXL6 827 aaKnown RBP7.48□□□□□ -1.21
HPS4-205ENST00000429411 CDH10Q9Y6N8 788 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 ANAPC1Q9H1A4 1944 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 RTTNQ86VV8 2226 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 DNAH14Q0VDD8 3507 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 DOCK8Q8NF50 2099 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 TRBV2A0A0J9YWF9 115 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 TEX13CA0A0J9YWL9 993 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 CENPBD1B2RD01 187 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 E9PI62 339 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 CASC3O15234 703 aaKnown RBP7.48□□□□□ -1.21
HPS4-205ENST00000429411 SPINT1O43278 529 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 DNAJB6O75190 326 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 RCBTB2O95199 551 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 IFNGP01579 166 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 CTSEP14091 401 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 ZNF10P21506 573 aaPredicted RBP7.48□□□□□ -1.21
HPS4-205ENST00000429411 AP2S1P53680 142 aaPredicted RBP7.48□□□□□ -1.21
HPS4-205ENST00000429411 OR1Q1Q15612 314 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 RPE65Q16518 533 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 NDUFAF6Q330K2 333 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 SLC25A25Q6KCM7 469 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 RTL4Q6ZR62 310 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 QSOX2Q6ZRP7 698 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 RASSF6Q6ZTQ3 369 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 CHMP1BQ7LBR1 199 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 LRRC56Q8IYG6 542 aaPredicted RBP7.48□□□□□ -1.21
HPS4-205ENST00000429411 FGF14Q92915 247 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 HS6ST2Q96MM7 605 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 TNFRSF13CQ96RJ3 184 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 PDCD1LG2Q9BQ51 273 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 ARHGAP9Q9BRR9 750 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 HCAR1Q9BXC0 346 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 NXF2Q9GZY0 626 aaKnown RBP7.48□□□□□ -1.21
HPS4-205ENST00000429411 ENKD1Q9H0I2 346 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 TMEM168Q9H0V1 697 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 DPAGT1Q9H3H5 408 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 CCDC86Q9H6F5 360 aaKnown RBP7.48□□□□□ -1.21
HPS4-205ENST00000429411 MTHFD2LQ9H903 347 aaPredicted RBP7.48□□□□□ -1.21
HPS4-205ENST00000429411 TMEM138Q9NPI0 162 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 FAM86C1Q9NVL1 165 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 HCN3Q9P1Z3 774 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 TBC1D29Q9UFV1 150 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 ERVK-19Q9WJR5 959 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 LSM2Q9Y333 95 aaKnown RBP7.48□□□□□ -1.21
HPS4-205ENST00000429411 TRAPPC13A5PLN9 417 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 URADA6NGE7 173 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 SLC9B1P1A6NJY1 282 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 ACOD1A6NK06 481 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 H3BUI4 141 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 SGK494L7N484 410 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 RNF13O43567 381 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 FBXO45P0C2W1 286 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 LINC00271P0C7V0 271 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 F3P13726 295 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 STOMP27105 288 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 ITPKBP27987 946 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 STAT5AP42229 794 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 CARD18P57730 90 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 GPLD1P80108 840 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 ASAH1Q13510 395 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 ZNF267Q14586 743 aaPredicted RBP7.47□□□□□ -1.21
HPS4-205ENST00000429411 POU4F3Q15319 338 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 ZNF322Q6U7Q0 402 aaPredicted RBP7.47□□□□□ -1.21
HPS4-205ENST00000429411 LYPD4Q6UWN0 246 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 ZNF836Q6ZNA1 936 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 PRSS41Q7RTY9 318 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms