RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 RANBP3LQ86VV4 465 aaPredicted RBP11.55□□□□□ -0.56
CDH3-202ENST00000429102 MEIOBQ8N635 442 aa11.55□□□□□ -0.56
CDH3-202ENST00000429102 MRPL43Q8N983 215 aaKnown RBP11.55□□□□□ -0.56
CDH3-202ENST00000429102 SLAIN1Q8ND83 568 aa11.55□□□□□ -0.56
CDH3-202ENST00000429102 SMARCD2Q92925 531 aa11.55□□□□□ -0.56
CDH3-202ENST00000429102 CREB3L1Q96BA8 519 aa11.55□□□□□ -0.56
CDH3-202ENST00000429102 NMNAT3Q96T66 252 aa11.55□□□□□ -0.56
CDH3-202ENST00000429102 MED18Q9BUE0 208 aa11.55□□□□□ -0.56
CDH3-202ENST00000429102 GTPBP2Q9BX10 602 aaKnown RBP11.55□□□□□ -0.56
CDH3-202ENST00000429102 TSPAN10Q9H1Z9 355 aaPredicted RBP11.55□□□□□ -0.56
CDH3-202ENST00000429102 FOLH1BQ9HBA9 442 aa11.55□□□□□ -0.56
CDH3-202ENST00000429102 CYSLTR2Q9NS75 346 aa11.55□□□□□ -0.56
CDH3-202ENST00000429102 A0A1W2PQU0 124 aa11.55□□□□□ -0.56
CDH3-202ENST00000429102 TRABD2BA6NFA1 517 aa11.55□□□□□ -0.56
CDH3-202ENST00000429102 SLC9A3R1O14745 358 aaPredicted RBP11.55□□□□□ -0.56
CDH3-202ENST00000429102 MAS1P04201 325 aa11.55□□□□□ -0.56
CDH3-202ENST00000429102 CSN2P05814 226 aa11.55□□□□□ -0.56
CDH3-202ENST00000429102 CCL5P13501 91 aa11.55□□□□□ -0.56
CDH3-202ENST00000429102 HK1P19367 917 aa11.55□□□□□ -0.56
CDH3-202ENST00000429102 POU3F2P20265 443 aaPredicted RBP11.55□□□□□ -0.56
CDH3-202ENST00000429102 FPR3P25089 353 aa11.55□□□□□ -0.56
CDH3-202ENST00000429102 FNTBP49356 437 aa11.55□□□□□ -0.56
CDH3-202ENST00000429102 BLVRAP53004 296 aa11.55□□□□□ -0.56
CDH3-202ENST00000429102 FXYD6P3P58550 94 aa11.55□□□□□ -0.56
CDH3-202ENST00000429102 LGALSLQ3ZCW2 172 aaPredicted RBP11.55□□□□□ -0.56
CDH3-202ENST00000429102 TMEM255AQ5JRV8 349 aa11.55□□□□□ -0.56
CDH3-202ENST00000429102 ZNF767PQ75MW2 155 aa11.55□□□□□ -0.56
CDH3-202ENST00000429102 LRRC25Q8N386 305 aaPredicted RBP11.55□□□□□ -0.56
CDH3-202ENST00000429102 FAM181AQ8N9Y4 354 aa11.55□□□□□ -0.56
CDH3-202ENST00000429102 ZNF511Q8NB15 262 aa11.55□□□□□ -0.56
CDH3-202ENST00000429102 ELMOD3Q96FG2 381 aa11.55□□□□□ -0.56
CDH3-202ENST00000429102 C19orf43Q9BQ61 176 aa11.55□□□□□ -0.56
CDH3-202ENST00000429102 SRA1Q9HD15 236 aaKnown RBP11.55□□□□□ -0.56
CDH3-202ENST00000429102 TMEM138Q9NPI0 162 aa11.55□□□□□ -0.56
CDH3-202ENST00000429102 MGAT4CQ9UBM8 478 aa11.55□□□□□ -0.56
CDH3-202ENST00000429102 MED31Q9Y3C7 131 aa11.55□□□□□ -0.56
CDH3-202ENST00000429102 CASC3O15234 703 aaKnown RBP11.55□□□□□ -0.56
CDH3-202ENST00000429102 FLRT2O43155 660 aa11.55□□□□□ -0.56
CDH3-202ENST00000429102 TYRP1P17643 537 aa11.55□□□□□ -0.56
CDH3-202ENST00000429102 F8A1P23610 371 aa11.55□□□□□ -0.56
CDH3-202ENST00000429102 GDI2P50395 445 aaKnown RBP11.55□□□□□ -0.56
CDH3-202ENST00000429102 EFNB1P98172 346 aa11.55□□□□□ -0.56
CDH3-202ENST00000429102 SFRP5Q5T4F7 317 aa11.55□□□□□ -0.56
CDH3-202ENST00000429102 MFSD12Q6NUT3 480 aa11.55□□□□□ -0.56
CDH3-202ENST00000429102 APOOLQ6UXV4 268 aa11.55□□□□□ -0.56
CDH3-202ENST00000429102 KIAA0907Q7Z7F0 614 aaPredicted RBP11.55□□□□□ -0.56
CDH3-202ENST00000429102 OR4K14Q8NGD5 310 aa11.55□□□□□ -0.56
CDH3-202ENST00000429102 SDF2Q99470 211 aa11.55□□□□□ -0.56
CDH3-202ENST00000429102 C1QTNF2Q9BXJ5 285 aa11.55□□□□□ -0.56
CDH3-202ENST00000429102 ULBP3Q9BZM4 244 aa11.55□□□□□ -0.56
CDH3-202ENST00000429102 SRMSQ9H3Y6 488 aa11.55□□□□□ -0.56
CDH3-202ENST00000429102 POM121BA6NF01 834 aa11.54□□□□□ -0.56
CDH3-202ENST00000429102 TVP23AA6NH52 213 aa11.54□□□□□ -0.56
CDH3-202ENST00000429102 SBK2P0C263 348 aa11.54□□□□□ -0.56
CDH3-202ENST00000429102 FAM157BP0CG42 384 aa11.54□□□□□ -0.56
CDH3-202ENST00000429102 LIPCP11150 499 aa11.54□□□□□ -0.56
CDH3-202ENST00000429102 IL9P15248 144 aa11.54□□□□□ -0.56
CDH3-202ENST00000429102 NPR2P20594 1047 aa11.54□□□□□ -0.56
CDH3-202ENST00000429102 SQSTM1Q13501 440 aa11.54□□□□□ -0.56
CDH3-202ENST00000429102 FGL2Q14314 439 aa11.54□□□□□ -0.56
CDH3-202ENST00000429102 GRK1Q15835 563 aa11.54□□□□□ -0.56
CDH3-202ENST00000429102 FAM78AQ5JUQ0 283 aa11.54□□□□□ -0.56
CDH3-202ENST00000429102 NHLRC1Q6VVB1 395 aa11.54□□□□□ -0.56
CDH3-202ENST00000429102 ZFP64Q9NPA5 681 aa11.54□□□□□ -0.56
CDH3-202ENST00000429102 NOX4Q9NPH5 578 aa11.54□□□□□ -0.56
CDH3-202ENST00000429102 PHPT1Q9NRX4 125 aaPredicted RBP11.54□□□□□ -0.56
CDH3-202ENST00000429102 IKZF2Q9UKS7 526 aa11.54□□□□□ -0.56
CDH3-202ENST00000429102 SCML1Q9UN30 329 aa11.54□□□□□ -0.56
CDH3-202ENST00000429102 FXYD6-FXYD2A0A087WZ82 144 aa11.54□□□□□ -0.56
CDH3-202ENST00000429102 M0R233 179 aa11.54□□□□□ -0.56
CDH3-202ENST00000429102 RAD52P43351 418 aa11.54□□□□□ -0.56
CDH3-202ENST00000429102 ERVK-25P63136 954 aa11.54□□□□□ -0.56
CDH3-202ENST00000429102 FZD5Q13467 585 aa11.54□□□□□ -0.56
CDH3-202ENST00000429102 MELKQ14680 651 aa11.54□□□□□ -0.56
CDH3-202ENST00000429102 ZNF658BQ4V348 819 aaPredicted RBP11.54□□□□□ -0.56
CDH3-202ENST00000429102 PLA1AQ53H76 456 aa11.54□□□□□ -0.56
CDH3-202ENST00000429102 FAAH2Q6GMR7 532 aa11.54□□□□□ -0.56
CDH3-202ENST00000429102 FGD2Q7Z6J4 655 aa11.54□□□□□ -0.56
CDH3-202ENST00000429102 UBE2Q1Q7Z7E8 422 aa11.54□□□□□ -0.56
CDH3-202ENST00000429102 NRROSQ86YC3 692 aa11.54□□□□□ -0.56
CDH3-202ENST00000429102 OR52I2Q8NH67 350 aa11.54□□□□□ -0.56
CDH3-202ENST00000429102 MED30Q96HR3 178 aa11.54□□□□□ -0.56
CDH3-202ENST00000429102 LRIG1Q96JA1 1093 aa11.54□□□□□ -0.56
CDH3-202ENST00000429102 HSPA12BQ96MM6 686 aa11.54□□□□□ -0.56
CDH3-202ENST00000429102 FXYD6Q9H0Q3 95 aa11.54□□□□□ -0.56
CDH3-202ENST00000429102 EPHX3Q9H6B9 360 aa11.54□□□□□ -0.56
CDH3-202ENST00000429102 CD93Q9NPY3 652 aa11.54□□□□□ -0.56
CDH3-202ENST00000429102 WASH6PQ9NQA3 447 aa11.54□□□□□ -0.56
CDH3-202ENST00000429102 TBC1D29Q9UFV1 150 aa11.54□□□□□ -0.56
CDH3-202ENST00000429102 ZMIZ1Q9ULJ6 1067 aa11.54□□□□□ -0.56
CDH3-202ENST00000429102 GPR171O14626 319 aa11.54□□□□□ -0.56
CDH3-202ENST00000429102 ARPC5O15511 151 aa11.54□□□□□ -0.56
CDH3-202ENST00000429102 OR10H2O60403 315 aa11.54□□□□□ -0.56
CDH3-202ENST00000429102 MPC2O95563 127 aa11.54□□□□□ -0.56
CDH3-202ENST00000429102 PLATP00750 562 aa11.54□□□□□ -0.56
CDH3-202ENST00000429102 CMPK1P30085 196 aa11.54□□□□□ -0.56
CDH3-202ENST00000429102 RUNX2Q13950 521 aa11.54□□□□□ -0.56
CDH3-202ENST00000429102 AKIRIN2Q53H80 203 aa11.54□□□□□ -0.56
CDH3-202ENST00000429102 LINC00471Q8N535 108 aa11.54□□□□□ -0.56
CDH3-202ENST00000429102 ZNF485Q8NCK3 441 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms