RNA–Protein interactions for RNA: ENST00000427722.2

RFX3-AS1-202, RFX3 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene RFX3-AS1, Length 1,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-AS1-202ENST00000427722 RNF128Q8TEB7 428 aa8.24□□□□□ -1.09
RFX3-AS1-202ENST00000427722 CKAP2Q8WWK9 683 aa8.24□□□□□ -1.09
RFX3-AS1-202ENST00000427722 TMEM234Q8WY98 164 aa8.24□□□□□ -1.09
RFX3-AS1-202ENST00000427722 ST8SIA1Q92185 356 aa8.24□□□□□ -1.09
RFX3-AS1-202ENST00000427722 CNOT9Q92600 299 aaKnown RBP8.24□□□□□ -1.09
RFX3-AS1-202ENST00000427722 CPNE4Q96A23 557 aaPredicted RBP8.24□□□□□ -1.09
RFX3-AS1-202ENST00000427722 REXO5Q96IC2 774 aaKnown RBP8.24□□□□□ -1.09
RFX3-AS1-202ENST00000427722 MAGEB18Q96M61 343 aa8.24□□□□□ -1.09
RFX3-AS1-202ENST00000427722 OR5B2Q96R09 309 aa8.24□□□□□ -1.09
RFX3-AS1-202ENST00000427722 CACYBPQ9HB71 228 aaKnown RBP8.24□□□□□ -1.09
RFX3-AS1-202ENST00000427722 TIGARQ9NQ88 270 aa8.24□□□□□ -1.09
RFX3-AS1-202ENST00000427722 RASSF1Q9NS23 344 aa8.24□□□□□ -1.09
RFX3-AS1-202ENST00000427722 KLHL28Q9NXS3 571 aa8.24□□□□□ -1.09
RFX3-AS1-202ENST00000427722 CCDC167Q9P0B6 97 aa8.24□□□□□ -1.09
RFX3-AS1-202ENST00000427722 DCTN4Q9UJW0 460 aa8.24□□□□□ -1.09
RFX3-AS1-202ENST00000427722 TESMINQ9Y4I5 508 aa8.24□□□□□ -1.09
RFX3-AS1-202ENST00000427722 APCP25054 2843 aa8.23□□□□□ -1.09
RFX3-AS1-202ENST00000427722 CCDC168Q8NDH2 2452 aa8.23□□□□□ -1.09
RFX3-AS1-202ENST00000427722 A0A096LPI6 279 aa8.23□□□□□ -1.09
RFX3-AS1-202ENST00000427722 ETV2O00321 342 aaPredicted RBP8.23□□□□□ -1.09
RFX3-AS1-202ENST00000427722 AP3D1O14617 1153 aa8.23□□□□□ -1.09
RFX3-AS1-202ENST00000427722 DNAJA2O60884 412 aa8.23□□□□□ -1.09
RFX3-AS1-202ENST00000427722 ADAM11O75078 769 aa8.23□□□□□ -1.09
RFX3-AS1-202ENST00000427722 CGAP01215 116 aa8.23□□□□□ -1.09
RFX3-AS1-202ENST00000427722 PABPC4LP0CB38 370 aaKnown RBP8.23□□□□□ -1.09
RFX3-AS1-202ENST00000427722 ZCCHC18P0CG32 403 aa8.23□□□□□ -1.09
RFX3-AS1-202ENST00000427722 TFPIP10646 304 aa8.23□□□□□ -1.09
RFX3-AS1-202ENST00000427722 CD8BP10966 210 aa8.23□□□□□ -1.09
RFX3-AS1-202ENST00000427722 NID1P14543 1247 aa8.23□□□□□ -1.09
RFX3-AS1-202ENST00000427722 RPS4Y1P22090 263 aaKnown RBP8.23□□□□□ -1.09
RFX3-AS1-202ENST00000427722 AGTR1P30556 359 aa8.23□□□□□ -1.09
RFX3-AS1-202ENST00000427722 UGT2B10P36537 528 aa8.23□□□□□ -1.09
RFX3-AS1-202ENST00000427722 CD79BP40259 229 aa8.23□□□□□ -1.09
RFX3-AS1-202ENST00000427722 MAGEA8P43361 318 aa8.23□□□□□ -1.09
RFX3-AS1-202ENST00000427722 MRPL19P49406 292 aaKnown RBP8.23□□□□□ -1.09
RFX3-AS1-202ENST00000427722 CRISP3P54108 245 aa8.23□□□□□ -1.09
RFX3-AS1-202ENST00000427722 GNA13Q14344 377 aa8.23□□□□□ -1.09
RFX3-AS1-202ENST00000427722 MAPK11Q15759 364 aa8.23□□□□□ -1.09
RFX3-AS1-202ENST00000427722 AGKQ53H12 422 aa8.23□□□□□ -1.09
RFX3-AS1-202ENST00000427722 SYT14P1Q58G82 188 aa8.23□□□□□ -1.09
RFX3-AS1-202ENST00000427722 MRPL2Q5T653 305 aaKnown RBP8.23□□□□□ -1.09
RFX3-AS1-202ENST00000427722 ZNF836Q6ZNA1 936 aa8.23□□□□□ -1.09
RFX3-AS1-202ENST00000427722 PLEKHM3Q6ZWE6 761 aa8.23□□□□□ -1.09
RFX3-AS1-202ENST00000427722 FCRLAQ7L513 359 aa8.23□□□□□ -1.09
RFX3-AS1-202ENST00000427722 ZNF550Q7Z398 422 aa8.23□□□□□ -1.09
RFX3-AS1-202ENST00000427722 FUNDC1Q8IVP5 155 aa8.23□□□□□ -1.09
RFX3-AS1-202ENST00000427722 CMIPQ8IY22 773 aa8.23□□□□□ -1.09
RFX3-AS1-202ENST00000427722 PEX5LQ8IYB4 626 aa8.23□□□□□ -1.09
RFX3-AS1-202ENST00000427722 ZNF610Q8N9Z0 462 aa8.23□□□□□ -1.09
RFX3-AS1-202ENST00000427722 SLC38A5Q8WUX1 472 aa8.23□□□□□ -1.09
RFX3-AS1-202ENST00000427722 GTF2H4Q92759 462 aa8.23□□□□□ -1.09
RFX3-AS1-202ENST00000427722 SPDL1Q96EA4 605 aa8.23□□□□□ -1.09
RFX3-AS1-202ENST00000427722 DNAJA3Q96EY1 480 aa8.23□□□□□ -1.09
RFX3-AS1-202ENST00000427722 DACH2Q96NX9 599 aa8.23□□□□□ -1.09
RFX3-AS1-202ENST00000427722 SLC39A3Q9BRY0 314 aa8.23□□□□□ -1.09
RFX3-AS1-202ENST00000427722 MED18Q9BUE0 208 aa8.23□□□□□ -1.09
RFX3-AS1-202ENST00000427722 KLHL4Q9C0H6 718 aa8.23□□□□□ -1.09
RFX3-AS1-202ENST00000427722 PAIP1Q9H074 479 aaKnown RBP8.23□□□□□ -1.09
RFX3-AS1-202ENST00000427722 C12orf49Q9H741 205 aa8.23□□□□□ -1.09
RFX3-AS1-202ENST00000427722 NPHS2Q9NP85 383 aa8.23□□□□□ -1.09
RFX3-AS1-202ENST00000427722 EXOSC3Q9NQT5 275 aaKnown RBP8.23□□□□□ -1.09
RFX3-AS1-202ENST00000427722 SERINC1Q9NRX5 453 aa8.23□□□□□ -1.09
RFX3-AS1-202ENST00000427722 ACER3Q9NUN7 267 aa8.23□□□□□ -1.09
RFX3-AS1-202ENST00000427722 KLHL13Q9P2N7 655 aa8.23□□□□□ -1.09
RFX3-AS1-202ENST00000427722 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.23□□□□□ -1.09
RFX3-AS1-202ENST00000427722 PCDHB14Q9Y5E9 798 aa8.23□□□□□ -1.09
RFX3-AS1-202ENST00000427722 CSMD1Q96PZ7 3565 aa8.23□□□□□ -1.09
RFX3-AS1-202ENST00000427722 LRBAP50851 2863 aa8.22□□□□□ -1.09
RFX3-AS1-202ENST00000427722 A0A0G2JND7 137 aa8.22□□□□□ -1.09
RFX3-AS1-202ENST00000427722 TMEM247A6NEH6 219 aa8.22□□□□□ -1.09
RFX3-AS1-202ENST00000427722 CFAP73A6NFT4 308 aa8.22□□□□□ -1.09
RFX3-AS1-202ENST00000427722 CLIC1O00299 241 aa8.22□□□□□ -1.09
RFX3-AS1-202ENST00000427722 CASKO14936 926 aa8.22□□□□□ -1.09
RFX3-AS1-202ENST00000427722 DBIP07108 87 aaKnown RBP8.22□□□□□ -1.09
RFX3-AS1-202ENST00000427722 FESP07332 822 aa8.22□□□□□ -1.09
RFX3-AS1-202ENST00000427722 UQCRBP14927 111 aa8.22□□□□□ -1.09
RFX3-AS1-202ENST00000427722 IL7RP16871 459 aa8.22□□□□□ -1.09
RFX3-AS1-202ENST00000427722 KLK2P20151 261 aa8.22□□□□□ -1.09
RFX3-AS1-202ENST00000427722 CCNA2P20248 432 aa8.22□□□□□ -1.09
RFX3-AS1-202ENST00000427722 ENPP1P22413 925 aa8.22□□□□□ -1.09
RFX3-AS1-202ENST00000427722 IDH2P48735 452 aaKnown RBP8.22□□□□□ -1.09
RFX3-AS1-202ENST00000427722 ATP4BP51164 291 aa8.22□□□□□ -1.09
RFX3-AS1-202ENST00000427722 DAZAP2Q15038 168 aaPredicted RBP8.22□□□□□ -1.09
RFX3-AS1-202ENST00000427722 RNPS1Q15287 305 aaKnown RBP8.22□□□□□ -1.09
RFX3-AS1-202ENST00000427722 LIN52Q52LA3 116 aa8.22□□□□□ -1.09
RFX3-AS1-202ENST00000427722 ARSJQ5FYB0 599 aaPredicted RBP8.22□□□□□ -1.09
RFX3-AS1-202ENST00000427722 TMEM201Q5SNT2 666 aa8.22□□□□□ -1.09
RFX3-AS1-202ENST00000427722 GCNT6Q5T4J0 391 aa8.22□□□□□ -1.09
RFX3-AS1-202ENST00000427722 GTF2IRD2BQ6EKJ0 949 aa8.22□□□□□ -1.09
RFX3-AS1-202ENST00000427722 GRINAQ7Z429 371 aa8.22□□□□□ -1.09
RFX3-AS1-202ENST00000427722 GTF2IRD2Q86UP8 949 aa8.22□□□□□ -1.09
RFX3-AS1-202ENST00000427722 STK32CQ86UX6 486 aa8.22□□□□□ -1.09
RFX3-AS1-202ENST00000427722 VRK2Q86Y07 508 aa8.22□□□□□ -1.09
RFX3-AS1-202ENST00000427722 CDC20BQ86Y33 519 aa8.22□□□□□ -1.09
RFX3-AS1-202ENST00000427722 OR52P1PQ8NH57 321 aa8.22□□□□□ -1.09
RFX3-AS1-202ENST00000427722 SLC25A43Q8WUT9 341 aaPredicted RBP8.22□□□□□ -1.09
RFX3-AS1-202ENST00000427722 MAL2Q969L2 176 aa8.22□□□□□ -1.09
RFX3-AS1-202ENST00000427722 ZC3HAV1LQ96H79 300 aaKnown RBP8.22□□□□□ -1.09
RFX3-AS1-202ENST00000427722 TMEM19Q96HH6 336 aa8.22□□□□□ -1.09
RFX3-AS1-202ENST00000427722 CCDC106Q9BWC9 280 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms