RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 HIST1H2BAQ96A08 127 aa5.23□□□□□ -1.57
VTI1BP4-201ENST00000427516 CMBLQ96DG6 245 aa5.23□□□□□ -1.57
VTI1BP4-201ENST00000427516 KLRG1Q96E93 195 aa5.23□□□□□ -1.57
VTI1BP4-201ENST00000427516 ZFP3Q96NJ6 502 aa5.23□□□□□ -1.57
VTI1BP4-201ENST00000427516 OR5B2Q96R09 309 aa5.23□□□□□ -1.57
VTI1BP4-201ENST00000427516 PPP1R16BQ96T49 567 aa5.23□□□□□ -1.57
VTI1BP4-201ENST00000427516 GPR21Q99679 349 aa5.23□□□□□ -1.57
VTI1BP4-201ENST00000427516 NRIP2Q9BQI9 281 aa5.23□□□□□ -1.57
VTI1BP4-201ENST00000427516 ALG8Q9BVK2 526 aa5.23□□□□□ -1.57
VTI1BP4-201ENST00000427516 DPH1Q9BZG8 443 aa5.23□□□□□ -1.57
VTI1BP4-201ENST00000427516 SLC39A8Q9C0K1 460 aa5.23□□□□□ -1.57
VTI1BP4-201ENST00000427516 CHST5Q9GZS9 411 aa5.23□□□□□ -1.57
VTI1BP4-201ENST00000427516 OR10A4Q9H209 315 aa5.23□□□□□ -1.57
VTI1BP4-201ENST00000427516 SLCO5A1Q9H2Y9 848 aa5.23□□□□□ -1.57
VTI1BP4-201ENST00000427516 RERGLQ9H628 205 aa5.23□□□□□ -1.57
VTI1BP4-201ENST00000427516 TMEM185BQ9H7F4 350 aa5.23□□□□□ -1.57
VTI1BP4-201ENST00000427516 METTL8Q9H825 291 aaKnown RBP5.23□□□□□ -1.57
VTI1BP4-201ENST00000427516 HRASLSQ9HDD0 168 aa5.23□□□□□ -1.57
VTI1BP4-201ENST00000427516 SEMA4GQ9NTN9 838 aa5.23□□□□□ -1.57
VTI1BP4-201ENST00000427516 PIGVQ9NUD9 493 aa5.23□□□□□ -1.57
VTI1BP4-201ENST00000427516 TMEM100Q9NV29 134 aa5.23□□□□□ -1.57
VTI1BP4-201ENST00000427516 TVP23BQ9NYZ1 205 aa5.23□□□□□ -1.57
VTI1BP4-201ENST00000427516 COX16Q9P0S2 106 aa5.23□□□□□ -1.57
VTI1BP4-201ENST00000427516 NTMQ9P121 344 aa5.23□□□□□ -1.57
VTI1BP4-201ENST00000427516 RCC2Q9P258 522 aaKnown RBP5.23□□□□□ -1.57
VTI1BP4-201ENST00000427516 CLEC2DQ9UHP7 191 aa5.23□□□□□ -1.57
VTI1BP4-201ENST00000427516 ZNF107Q9UII5 783 aaPredicted RBP5.23□□□□□ -1.57
VTI1BP4-201ENST00000427516 FBXL21Q9UKT6 434 aa5.23□□□□□ -1.57
VTI1BP4-201ENST00000427516 RCE1Q9Y256 329 aa5.23□□□□□ -1.57
VTI1BP4-201ENST00000427516 EXOGQ9Y2C4 368 aaKnown RBP5.23□□□□□ -1.57
VTI1BP4-201ENST00000427516 FBXO7Q9Y3I1 522 aa5.23□□□□□ -1.57
VTI1BP4-201ENST00000427516 COL11A1P12107 1806 aaPredicted RBP5.23□□□□□ -1.57
VTI1BP4-201ENST00000427516 TRBV23-1A0A0A0MS06 115 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 IGKV6D-21A0A0A0MT36 114 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 ABHD14A-ACY1A0A1B0GW23 586 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 A0A1W2PPQ1 181 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 TRBC2A0A5B9 178 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 MGAT4DA6NG13 374 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 GABRR3A8MPY1 467 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 ZNF705EA8MWA4 302 aaPredicted RBP5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 H7BY64 318 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 SCAMP2O15127 329 aaKnown RBP5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 MAGEB4O15481 346 aaPredicted RBP5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 MBTPS2O43462 519 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 SYT7O43581 403 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 HYAL3O43820 417 aaPredicted RBP5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 GPRIN2O60269 458 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 OR1I1O60431 355 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 MAFKO60675 156 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 SEMA7AO75326 666 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 HPXP02790 462 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 HLA-DQB2P05538 268 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 ANXA2P07355 339 aaKnown RBP5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 CD3GP09693 182 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 OR5AC1P0C628 307 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 OR4E1P0C645 316 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 SFTA3P0C7M3 94 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 OR8U8P0C7N1 319 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 CALCBP10092 127 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 ZNF7P17097 686 aaPredicted RBP5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 SDC1P18827 310 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 CR2P20023 1033 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 TBXA2RP21731 343 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 IDSP22304 550 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 ADH6P28332 368 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 GABRR2P28476 465 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 ADORA2BP29275 332 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 HTR1FP30939 366 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 SERPINF1P36955 418 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 RABIFP47224 123 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 OMPP47874 163 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 HTR6P50406 440 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 WNT3P56703 355 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 ACTA2P62736 377 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 ACTG2P63267 376 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 RING1Q06587 406 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 TNFRSF9Q07011 255 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 ACSM2AQ08AH3 577 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 ELAVL2Q12926 359 aaKnown RBP5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 OLIG2Q13516 323 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 NAE1Q13564 534 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 ZNF235Q14590 738 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 GANABQ14697 944 aaKnown RBP5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 TMEM255AQ5JRV8 349 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 ENTPD8Q5MY95 495 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 TMEM69Q5SWH9 247 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 SFRP5Q5T4F7 317 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 ADGRF1Q5T601 910 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 OTUD1Q5VV17 481 aaPredicted RBP5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 ACSM2BQ68CK6 577 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 TANGO2Q6ICL3 276 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 ZNF770Q6IQ21 691 aaPredicted RBP5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 CXorf57Q6NSI4 855 aaKnown RBP5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 C11orf87Q6NUJ2 197 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 REEP3Q6NUK4 255 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 ZCCHC12Q6PEW1 402 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 SMARCD3Q6STE5 483 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 ZNF322Q6U7Q0 402 aaPredicted RBP5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 RBMS3Q6XE24 437 aaKnown RBP5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 SPNS3Q6ZMD2 512 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms