RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 MIER2Q8N344 545 aa11.36□□□□□ -0.59
SGCE-203ENST00000425444 ZNF610Q8N9Z0 462 aa11.36□□□□□ -0.59
SGCE-203ENST00000425444 OR6K3Q8NGY3 331 aa11.36□□□□□ -0.59
SGCE-203ENST00000425444 ZNF563Q8TA94 476 aa11.36□□□□□ -0.59
SGCE-203ENST00000425444 ZFP90Q8TF47 636 aa11.36□□□□□ -0.59
SGCE-203ENST00000425444 OIT3Q8WWZ8 545 aa11.36□□□□□ -0.59
SGCE-203ENST00000425444 CPNE4Q96A23 557 aaPredicted RBP11.36□□□□□ -0.59
SGCE-203ENST00000425444 C7orf26Q96N11 449 aa11.36□□□□□ -0.59
SGCE-203ENST00000425444 THUMPD3Q9BV44 507 aaKnown RBP11.36□□□□□ -0.59
SGCE-203ENST00000425444 LAT2Q9GZY6 243 aa11.36□□□□□ -0.59
SGCE-203ENST00000425444 RMND5AQ9H871 391 aa11.36□□□□□ -0.59
SGCE-203ENST00000425444 GLRX2Q9NS18 164 aa11.36□□□□□ -0.59
SGCE-203ENST00000425444 ELOVL5Q9NYP7 299 aa11.36□□□□□ -0.59
SGCE-203ENST00000425444 KCNE5Q9UJ90 142 aa11.36□□□□□ -0.59
SGCE-203ENST00000425444 LIPT1Q9Y234 373 aa11.36□□□□□ -0.59
SGCE-203ENST00000425444 SLC35A3Q9Y2D2 325 aa11.36□□□□□ -0.59
SGCE-203ENST00000425444 USH1CQ9Y6N9 552 aa11.36□□□□□ -0.59
SGCE-203ENST00000425444 PCNX3Q9H6A9 2034 aa11.36□□□□□ -0.59
SGCE-203ENST00000425444 SS18L1O75177 396 aaPredicted RBP11.35□□□□□ -0.59
SGCE-203ENST00000425444 C1QCP02747 245 aa11.35□□□□□ -0.59
SGCE-203ENST00000425444 GUSBP08236 651 aa11.35□□□□□ -0.59
SGCE-203ENST00000425444 NID1P14543 1247 aa11.35□□□□□ -0.59
SGCE-203ENST00000425444 TXNL4AP83876 142 aaKnown RBP11.35□□□□□ -0.59
SGCE-203ENST00000425444 CHRNEQ04844 493 aa11.35□□□□□ -0.59
SGCE-203ENST00000425444 DMTNQ08495 405 aa11.35□□□□□ -0.59
SGCE-203ENST00000425444 MERTKQ12866 999 aa11.35□□□□□ -0.59
SGCE-203ENST00000425444 GUSBP1Q15486 140 aa11.35□□□□□ -0.59
SGCE-203ENST00000425444 MAPK14Q16539 360 aa11.35□□□□□ -0.59
SGCE-203ENST00000425444 C6orf10Q5SRN2 563 aa11.35□□□□□ -0.59
SGCE-203ENST00000425444 ZNF474Q6S9Z5 364 aaPredicted RBP11.35□□□□□ -0.59
SGCE-203ENST00000425444 HDXQ7Z353 690 aa11.35□□□□□ -0.59
SGCE-203ENST00000425444 TMEM234Q8WY98 164 aa11.35□□□□□ -0.59
SGCE-203ENST00000425444 ROBO4Q8WZ75 1007 aa11.35□□□□□ -0.59
SGCE-203ENST00000425444 ST8SIA1Q92185 356 aa11.35□□□□□ -0.59
SGCE-203ENST00000425444 ITCHQ96J02 903 aa11.35□□□□□ -0.59
SGCE-203ENST00000425444 MED18Q9BUE0 208 aa11.35□□□□□ -0.59
SGCE-203ENST00000425444 SRXN1Q9BYN0 137 aa11.35□□□□□ -0.59
SGCE-203ENST00000425444 KLHL4Q9C0H6 718 aa11.35□□□□□ -0.59
SGCE-203ENST00000425444 QRSL1Q9H0R6 528 aaKnown RBP11.35□□□□□ -0.59
SGCE-203ENST00000425444 FANCFQ9NPI8 374 aa11.35□□□□□ -0.59
SGCE-203ENST00000425444 SDR39U1Q9NRG7 319 aaPredicted RBP11.35□□□□□ -0.59
SGCE-203ENST00000425444 SERINC1Q9NRX5 453 aa11.35□□□□□ -0.59
SGCE-203ENST00000425444 KLHL28Q9NXS3 571 aa11.35□□□□□ -0.59
SGCE-203ENST00000425444 SVEP1Q4LDE5 3571 aa11.35□□□□□ -0.59
SGCE-203ENST00000425444 A0A1W2PNR3 127 aa11.34□□□□□ -0.59
SGCE-203ENST00000425444 PRAMEF27A3QJZ7 478 aa11.34□□□□□ -0.59
SGCE-203ENST00000425444 C16orf97H3BN30 126 aa11.34□□□□□ -0.59
SGCE-203ENST00000425444 CGAP01215 116 aa11.34□□□□□ -0.59
SGCE-203ENST00000425444 CHRM4P08173 479 aa11.34□□□□□ -0.59
SGCE-203ENST00000425444 NR2F1P10589 423 aa11.34□□□□□ -0.59
SGCE-203ENST00000425444 AGTR1P30556 359 aa11.34□□□□□ -0.59
SGCE-203ENST00000425444 CCKARP32238 428 aa11.34□□□□□ -0.59
SGCE-203ENST00000425444 RYKP34925 604 aa11.34□□□□□ -0.59
SGCE-203ENST00000425444 UGT2B10P36537 528 aa11.34□□□□□ -0.59
SGCE-203ENST00000425444 PGM1P36871 562 aa11.34□□□□□ -0.59
SGCE-203ENST00000425444 CRATP43155 626 aa11.34□□□□□ -0.59
SGCE-203ENST00000425444 POLR2JP52435 117 aaKnown RBP11.34□□□□□ -0.59
SGCE-203ENST00000425444 KRTAP1-1Q07627 177 aa11.34□□□□□ -0.59
SGCE-203ENST00000425444 GNA13Q14344 377 aa11.34□□□□□ -0.59
SGCE-203ENST00000425444 RNPS1Q15287 305 aaKnown RBP11.34□□□□□ -0.59
SGCE-203ENST00000425444 SYPL1Q16563 259 aa11.34□□□□□ -0.59
SGCE-203ENST00000425444 SLC25A53Q5H9E4 307 aa11.34□□□□□ -0.59
SGCE-203ENST00000425444 COX20Q5RI15 118 aa11.34□□□□□ -0.59
SGCE-203ENST00000425444 TMEM201Q5SNT2 666 aa11.34□□□□□ -0.59
SGCE-203ENST00000425444 EPGNQ6UW88 154 aa11.34□□□□□ -0.59
SGCE-203ENST00000425444 MSANTD1Q6ZTZ1 278 aa11.34□□□□□ -0.59
SGCE-203ENST00000425444 FCRLAQ7L513 359 aa11.34□□□□□ -0.59
SGCE-203ENST00000425444 STK32CQ86UX6 486 aa11.34□□□□□ -0.59
SGCE-203ENST00000425444 ARFGAP2Q8N6H7 521 aa11.34□□□□□ -0.59
SGCE-203ENST00000425444 ANKFN1Q8N957 763 aa11.34□□□□□ -0.59
SGCE-203ENST00000425444 OR9I1Q8NGQ6 314 aa11.34□□□□□ -0.59
SGCE-203ENST00000425444 RNF128Q8TEB7 428 aa11.34□□□□□ -0.59
SGCE-203ENST00000425444 ABHD3Q8WU67 409 aa11.34□□□□□ -0.59
SGCE-203ENST00000425444 VPS33AQ96AX1 596 aa11.34□□□□□ -0.59
SGCE-203ENST00000425444 TRNT1Q96Q11 434 aaKnown RBP11.34□□□□□ -0.59
SGCE-203ENST00000425444 CCL19Q99731 98 aa11.34□□□□□ -0.59
SGCE-203ENST00000425444 SAP130Q9H0E3 1048 aa11.34□□□□□ -0.59
SGCE-203ENST00000425444 C12orf49Q9H741 205 aa11.34□□□□□ -0.59
SGCE-203ENST00000425444 COQ10BQ9H8M1 238 aa11.34□□□□□ -0.59
SGCE-203ENST00000425444 SLCO1B3Q9NPD5 702 aa11.34□□□□□ -0.59
SGCE-203ENST00000425444 TCF7L2Q9NQB0 619 aa11.34□□□□□ -0.59
SGCE-203ENST00000425444 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.34□□□□□ -0.59
SGCE-203ENST00000425444 INTS9Q9NV88 658 aaKnown RBP11.34□□□□□ -0.59
SGCE-203ENST00000425444 ZNF226Q9NYT6 803 aa11.34□□□□□ -0.59
SGCE-203ENST00000425444 P2RX2Q9UBL9 471 aa11.34□□□□□ -0.59
SGCE-203ENST00000425444 TESMINQ9Y4I5 508 aa11.34□□□□□ -0.59
SGCE-203ENST00000425444 SPIN1Q9Y657 262 aaPredicted RBP11.34□□□□□ -0.59
SGCE-203ENST00000425444 IGHV3-15A0A0B4J1V0 119 aa11.33□□□□□ -0.6
SGCE-203ENST00000425444 HMGB1P1B2RPK0 211 aaPredicted RBP11.33□□□□□ -0.6
SGCE-203ENST00000425444 EFNA2O43921 213 aa11.33□□□□□ -0.6
SGCE-203ENST00000425444 NTN1O95631 604 aa11.33□□□□□ -0.6
SGCE-203ENST00000425444 IL7RP16871 459 aa11.33□□□□□ -0.6
SGCE-203ENST00000425444 PCYT1AP49585 367 aa11.33□□□□□ -0.6
SGCE-203ENST00000425444 SESN3P58005 492 aa11.33□□□□□ -0.6
SGCE-203ENST00000425444 KCNJ10P78508 379 aa11.33□□□□□ -0.6
SGCE-203ENST00000425444 LRRC74BQ6ZQY2 392 aa11.33□□□□□ -0.6
SGCE-203ENST00000425444 PLEKHM3Q6ZWE6 761 aa11.33□□□□□ -0.6
SGCE-203ENST00000425444 ZNF550Q7Z398 422 aa11.33□□□□□ -0.6
SGCE-203ENST00000425444 FAM71CQ8NEG0 241 aa11.33□□□□□ -0.6
SGCE-203ENST00000425444 SLC25A43Q8WUT9 341 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms