RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 STRADBQ9C0K7 418 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 IKZF5Q9H5V7 419 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 S100A14Q9HCY8 104 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 MRPS30Q9NP92 439 aaKnown RBP2.24□□□□□ -2.05
MCF2-204ENST00000414978 CHRAC1Q9NRG0 131 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 AGPAT3Q9NRZ7 376 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 INTS9Q9NV88 658 aaKnown RBP2.24□□□□□ -2.05
MCF2-204ENST00000414978 TEX10Q9NXF1 929 aaPredicted RBP2.24□□□□□ -2.05
MCF2-204ENST00000414978 AHSPQ9NZD4 102 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 PDP1Q9P0J1 537 aaPredicted RBP2.24□□□□□ -2.05
MCF2-204ENST00000414978 CDH9Q9ULB4 789 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 OR10H1Q9Y4A9 318 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 ZFHX4Q86UP3 3567 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 GSTTP1A0A1W2PQM5 241 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 OR5K4A6NMS3 321 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 SNTNA6NMZ2 147 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 SUPT3HB4E1H0 165 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 WRBO00258 174 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 CHST1O43916 411 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 EML2O95834 649 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 IGHG3P01860 377 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 ATP1A1P05023 1023 aaKnown RBP2.23□□□□□ -2.05
MCF2-204ENST00000414978 CCL2P13500 99 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 TNNI1P19237 187 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 HPCAL1P37235 193 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 PPP1R2P41236 205 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 ARRB1P49407 418 aaPredicted RBP2.23□□□□□ -2.05
MCF2-204ENST00000414978 STX17P56962 302 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 ERVK11-1P61568 191 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 RPL23AP62750 156 aaKnown RBP2.23□□□□□ -2.05
MCF2-204ENST00000414978 BLOC1S1P78537 153 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 DAZAP2Q15038 168 aaPredicted RBP2.23□□□□□ -2.05
MCF2-204ENST00000414978 HKDC1Q2TB90 917 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 ZNF829Q3KNS6 432 aaPredicted RBP2.23□□□□□ -2.05
MCF2-204ENST00000414978 GTDC1Q4AE62 458 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 FILIP1LQ4L180 1135 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 HSP90AA4PQ58FG1 418 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 SLC35D3Q5M8T2 416 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 CYS1Q717R9 158 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 HPS6Q86YV9 775 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 DND1Q8IYX4 353 aaKnown RBP2.23□□□□□ -2.05
MCF2-204ENST00000414978 SLC34A3Q8N130 599 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 THAP6Q8TBB0 222 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 HCAR2Q8TDS4 363 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 NELFBQ8WX92 580 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 MRGPRFQ96AM1 343 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 PRAC1Q96KF2 57 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 RIT2Q99578 217 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 TMEM79Q9BSE2 394 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 PRSS22Q9GZN4 317 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 STMN4Q9H169 189 aaPredicted RBP2.23□□□□□ -2.05
MCF2-204ENST00000414978 ADNPQ9H2P0 1102 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 AUNIPQ9H7T9 357 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 IL1RL2Q9HB29 575 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 RRAGDQ9NQL2 400 aaPredicted RBP2.23□□□□□ -2.05
MCF2-204ENST00000414978 FAM120CQ9NX05 1096 aaKnown RBP2.23□□□□□ -2.05
MCF2-204ENST00000414978 ZNF224Q9NZL3 707 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 ZDHHC2Q9UIJ5 367 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 RWDD2AQ9UIY3 292 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 FZR1Q9UM11 496 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 PLXNA2O75051 1894 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 A0A0G2JNG1 304 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 LOC101059948A0A1B0GTJ6 334 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 ZNF233A6NK53 670 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 NEDD8-MDP1E9PL57 170 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 EDIL3O43854 480 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 NME2P1O60361 137 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 GMDSO60547 372 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 NDUFA7O95182 113 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 PRKAR1AP10644 381 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 CCDC130P13994 396 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 ETS2P15036 469 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 RBMS1P29558 406 aaKnown RBP2.23□□□□□ -2.05
MCF2-204ENST00000414978 ARHGDIAP52565 204 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 ATP5J2P56134 94 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 OSTNP61366 133 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 RBBP4Q09028 425 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 C1orf61Q13536 156 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 KIR2DS5Q14953 304 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 DUSP5Q16690 384 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 PPP6R3Q5H9R7 873 aaPredicted RBP2.23□□□□□ -2.05
MCF2-204ENST00000414978 ZNF311Q5JNZ3 666 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 NEPROQ6NW34 567 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 RNASEKQ6P5S7 137 aaKnown RBP2.23□□□□□ -2.05
MCF2-204ENST00000414978 SH2D5Q6ZV89 423 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 ISCA2Q86U28 154 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 NAXDQ8IW45 347 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 TRMT10AQ8TBZ6 339 aaKnown RBP2.23□□□□□ -2.05
MCF2-204ENST00000414978 SMAP2Q8WU79 429 aaPredicted RBP2.23□□□□□ -2.05
MCF2-204ENST00000414978 TSEN15Q8WW01 171 aaKnown RBP2.23□□□□□ -2.05
MCF2-204ENST00000414978 DNAJA4Q8WW22 397 aaPredicted RBP2.23□□□□□ -2.05
MCF2-204ENST00000414978 DNAJB3Q8WWF6 145 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 CRYGNQ8WXF5 182 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 HSD17B8Q92506 261 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 FGF13Q92913 245 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 CD101Q93033 1021 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 NCLNQ969V3 563 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 C2orf48Q96LS8 159 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 NUP58Q9BVL2 599 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 EGLN3Q9H6Z9 239 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms