RNA–Protein interactions for RNA: ENST00000414664.5

CPNE1-207, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-207ENST00000414664 ARMCX1Q9P291 453 aa22.71■■□□□ 1.23
CPNE1-207ENST00000414664 ANGPT4Q9Y264 503 aa22.71■■□□□ 1.23
CPNE1-207ENST00000414664 SETXQ7Z333 2677 aaKnown RBP22.7■■□□□ 1.22
CPNE1-207ENST00000414664 GYS2P54840 703 aa22.7■■□□□ 1.22
CPNE1-207ENST00000414664 EPS8Q12929 822 aa22.7■■□□□ 1.22
CPNE1-207ENST00000414664 CAPRIN1Q14444 709 aaKnown RBP22.7■■□□□ 1.22
CPNE1-207ENST00000414664 ADRM1Q16186 407 aa22.7■■□□□ 1.22
CPNE1-207ENST00000414664 GTF2IRD2BQ6EKJ0 949 aa22.7■■□□□ 1.22
CPNE1-207ENST00000414664 GTF2IRD2Q86UP8 949 aa22.7■■□□□ 1.22
CPNE1-207ENST00000414664 RP9Q8TA86 221 aaKnown RBP22.7■■□□□ 1.22
CPNE1-207ENST00000414664 CPNE4Q96A23 557 aaPredicted RBP22.7■■□□□ 1.22
CPNE1-207ENST00000414664 MARVELD3Q96A59 401 aa22.7■■□□□ 1.22
CPNE1-207ENST00000414664 REXO5Q96IC2 774 aaKnown RBP22.7■■□□□ 1.22
CPNE1-207ENST00000414664 CCDC106Q9BWC9 280 aa22.7■■□□□ 1.22
CPNE1-207ENST00000414664 KAT8Q9H7Z6 458 aaKnown RBP22.7■■□□□ 1.22
CPNE1-207ENST00000414664 FOXD3Q9UJU5 478 aaPredicted RBP22.7■■□□□ 1.22
CPNE1-207ENST00000414664 SYT5O00445 386 aa22.69■■□□□ 1.22
CPNE1-207ENST00000414664 AP3D1O14617 1153 aa22.69■■□□□ 1.22
CPNE1-207ENST00000414664 ADAM11O75078 769 aa22.69■■□□□ 1.22
CPNE1-207ENST00000414664 SERPINB7O75635 380 aa22.69■■□□□ 1.22
CPNE1-207ENST00000414664 SHC1P29353 583 aa22.69■■□□□ 1.22
CPNE1-207ENST00000414664 PRKAR1BP31321 381 aa22.69■■□□□ 1.22
CPNE1-207ENST00000414664 SLC1A3P43003 542 aa22.69■■□□□ 1.22
CPNE1-207ENST00000414664 COPZ1P61923 177 aa22.69■■□□□ 1.22
CPNE1-207ENST00000414664 FBXL19-AS1Q494R0 122 aa22.69■■□□□ 1.22
CPNE1-207ENST00000414664 NANOGP8Q6NSW7 305 aa22.69■■□□□ 1.22
CPNE1-207ENST00000414664 MEX3BQ6ZN04 569 aaKnown RBP22.69■■□□□ 1.22
CPNE1-207ENST00000414664 SERPINA11Q86U17 422 aa22.69■■□□□ 1.22
CPNE1-207ENST00000414664 SLC30A8Q8IWU4 369 aa22.69■■□□□ 1.22
CPNE1-207ENST00000414664 CLIP4Q8N3C7 705 aa22.69■■□□□ 1.22
CPNE1-207ENST00000414664 SLC35B4Q969S0 331 aa22.69■■□□□ 1.22
CPNE1-207ENST00000414664 NANOGQ9H9S0 305 aa22.69■■□□□ 1.22
CPNE1-207ENST00000414664 SLC24A3Q9HC58 644 aa22.69■■□□□ 1.22
CPNE1-207ENST00000414664 NPDC1Q9NQX5 325 aaPredicted RBP22.69■■□□□ 1.22
CPNE1-207ENST00000414664 CTPS2Q9NRF8 586 aa22.69■■□□□ 1.22
CPNE1-207ENST00000414664 MED12LQ86YW9 2145 aa22.69■■□□□ 1.22
CPNE1-207ENST00000414664 HCFC1P51610 2035 aa22.69■■□□□ 1.22
CPNE1-207ENST00000414664 A0A1W2PNV4 684 aa22.68■■□□□ 1.22
CPNE1-207ENST00000414664 PRORSD1PA6NEY8 169 aa22.68■■□□□ 1.22
CPNE1-207ENST00000414664 EEF1E1-BLOC1S5C9J1V9 151 aa22.68■■□□□ 1.22
CPNE1-207ENST00000414664 EEF1E1O43324 174 aaKnown RBP22.68■■□□□ 1.22
CPNE1-207ENST00000414664 SNX3O60493 162 aa22.68■■□□□ 1.22
CPNE1-207ENST00000414664 DRD4P21917 467 aa22.68■■□□□ 1.22
CPNE1-207ENST00000414664 PEX19P40855 299 aa22.68■■□□□ 1.22
CPNE1-207ENST00000414664 SELPLGQ14242 412 aa22.68■■□□□ 1.22
CPNE1-207ENST00000414664 MTDHQ86UE4 582 aaKnown RBP22.68■■□□□ 1.22
CPNE1-207ENST00000414664 CNEP1R1Q8N9A8 125 aa22.68■■□□□ 1.22
CPNE1-207ENST00000414664 ACBD4Q8NC06 268 aa22.68■■□□□ 1.22
CPNE1-207ENST00000414664 BHLHE22Q8NFJ8 381 aaPredicted RBP22.68■■□□□ 1.22
CPNE1-207ENST00000414664 OR8J3Q8NGG0 315 aa22.68■■□□□ 1.22
CPNE1-207ENST00000414664 RNASE6Q93091 150 aaKnown RBP22.68■■□□□ 1.22
CPNE1-207ENST00000414664 TRIM8Q9BZR9 551 aa22.68■■□□□ 1.22
CPNE1-207ENST00000414664 GLRX2Q9NS18 164 aa22.68■■□□□ 1.22
CPNE1-207ENST00000414664 CHRNA9Q9UGM1 479 aa22.68■■□□□ 1.22
CPNE1-207ENST00000414664 PACSIN3Q9UKS6 424 aa22.68■■□□□ 1.22
CPNE1-207ENST00000414664 AQP8O94778 261 aa22.67■■□□□ 1.22
CPNE1-207ENST00000414664 PLGP00747 810 aaPredicted RBP22.67■■□□□ 1.22
CPNE1-207ENST00000414664 GKN3PP0CG01 181 aa22.67■■□□□ 1.22
CPNE1-207ENST00000414664 CLK1P49759 484 aaKnown RBP22.67■■□□□ 1.22
CPNE1-207ENST00000414664 POLR2HP52434 150 aaKnown RBP22.67■■□□□ 1.22
CPNE1-207ENST00000414664 MAP2K6P52564 334 aa22.67■■□□□ 1.22
CPNE1-207ENST00000414664 SYT14P1Q58G82 188 aa22.67■■□□□ 1.22
CPNE1-207ENST00000414664 NET1Q7Z628 596 aaPredicted RBP22.67■■□□□ 1.22
CPNE1-207ENST00000414664 PTOV1Q86YD1 416 aa22.67■■□□□ 1.22
CPNE1-207ENST00000414664 MCEMP1Q8IX19 187 aa22.67■■□□□ 1.22
CPNE1-207ENST00000414664 OR10A6Q8NH74 314 aa22.67■■□□□ 1.22
CPNE1-207ENST00000414664 OR5B2Q96R09 309 aa22.67■■□□□ 1.22
CPNE1-207ENST00000414664 ECSITQ9BQ95 431 aa22.67■■□□□ 1.22
CPNE1-207ENST00000414664 JKAMPQ9P055 326 aa22.67■■□□□ 1.22
CPNE1-207ENST00000414664 INTS1Q8N201 2190 aaKnown RBP22.67■■□□□ 1.22
CPNE1-207ENST00000414664 TNFSF13O75888 250 aa22.66■■□□□ 1.22
CPNE1-207ENST00000414664 TFPIP10646 304 aa22.66■■□□□ 1.22
CPNE1-207ENST00000414664 IGFBP2P18065 325 aa22.66■■□□□ 1.22
CPNE1-207ENST00000414664 UQCRC1P31930 480 aa22.66■■□□□ 1.22
CPNE1-207ENST00000414664 ACAA2P42765 397 aaKnown RBP22.66■■□□□ 1.22
CPNE1-207ENST00000414664 RAC3P60763 192 aa22.66■■□□□ 1.22
CPNE1-207ENST00000414664 ZNF239Q16600 458 aaKnown RBP22.66■■□□□ 1.22
CPNE1-207ENST00000414664 DHRS4L2Q6PKH6 230 aa22.66■■□□□ 1.22
CPNE1-207ENST00000414664 ADGRG3Q86Y34 549 aa22.66■■□□□ 1.22
CPNE1-207ENST00000414664 GMPPAQ96IJ6 420 aaPredicted RBP22.66■■□□□ 1.22
CPNE1-207ENST00000414664 SLC39A3Q9BRY0 314 aa22.66■■□□□ 1.22
CPNE1-207ENST00000414664 COQ10BQ9H8M1 238 aa22.66■■□□□ 1.22
CPNE1-207ENST00000414664 CHST2Q9Y4C5 530 aa22.66■■□□□ 1.22
CPNE1-207ENST00000414664 TMED7-TICAM2A0A0A6YYA0 188 aa22.65■■□□□ 1.22
CPNE1-207ENST00000414664 A0A1W2PNR3 127 aa22.65■■□□□ 1.22
CPNE1-207ENST00000414664 FXYD1O00168 92 aa22.65■■□□□ 1.22
CPNE1-207ENST00000414664 COX4I1P13073 169 aa22.65■■□□□ 1.22
CPNE1-207ENST00000414664 TACR3P29371 465 aa22.65■■□□□ 1.22
CPNE1-207ENST00000414664 AQP1P29972 269 aa22.65■■□□□ 1.22
CPNE1-207ENST00000414664 CSNK2A1P68400 391 aaPredicted RBP22.65■■□□□ 1.22
CPNE1-207ENST00000414664 INTS11Q5TA45 600 aaKnown RBP22.65■■□□□ 1.22
CPNE1-207ENST00000414664 WBP2NLQ6ICG8 309 aa22.65■■□□□ 1.22
CPNE1-207ENST00000414664 ARMC8Q8IUR7 673 aa22.65■■□□□ 1.22
CPNE1-207ENST00000414664 DMRTC2Q8IXT2 367 aaPredicted RBP22.65■■□□□ 1.22
CPNE1-207ENST00000414664 CADM2Q8N3J6 435 aa22.65■■□□□ 1.22
CPNE1-207ENST00000414664 POU5F2Q8N7G0 328 aa22.65■■□□□ 1.22
CPNE1-207ENST00000414664 KLHL28Q9NXS3 571 aa22.65■■□□□ 1.22
CPNE1-207ENST00000414664 OSGIN1Q9UJX0 560 aa22.65■■□□□ 1.22
CPNE1-207ENST00000414664 SLC13A4Q9UKG4 626 aa22.65■■□□□ 1.22
CPNE1-207ENST00000414664 TMED7Q9Y3B3 224 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms