RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 DCDC5Q6ZRR9 648 aa7.91□□□□□ -1.14
SYNE1-211ENST00000413186 OVCH1Q7RTY7 1134 aa7.91□□□□□ -1.14
SYNE1-211ENST00000413186 FAM71E2Q8N5Q1 922 aa7.91□□□□□ -1.14
SYNE1-211ENST00000413186 OR6K6Q8NGW6 343 aa7.91□□□□□ -1.14
SYNE1-211ENST00000413186 POLR2J2Q9GZM3 115 aaKnown RBP7.91□□□□□ -1.14
SYNE1-211ENST00000413186 FAM86C1Q9NVL1 165 aa7.91□□□□□ -1.14
SYNE1-211ENST00000413186 MRPS2Q9Y399 296 aaKnown RBP7.91□□□□□ -1.14
SYNE1-211ENST00000413186 UNC80Q8N2C7 3258 aa7.91□□□□□ -1.14
SYNE1-211ENST00000413186 SPTBN5Q9NRC6 3674 aaKnown RBP7.91□□□□□ -1.14
SYNE1-211ENST00000413186 JRKO75564 520 aa7.9□□□□□ -1.14
SYNE1-211ENST00000413186 CD2P06729 351 aa7.9□□□□□ -1.14
SYNE1-211ENST00000413186 PRKAR1AP10644 381 aa7.9□□□□□ -1.14
SYNE1-211ENST00000413186 ALDH3B1P43353 468 aa7.9□□□□□ -1.14
SYNE1-211ENST00000413186 SELPLGQ14242 412 aa7.9□□□□□ -1.14
SYNE1-211ENST00000413186 KIAA0040Q15053 153 aa7.9□□□□□ -1.14
SYNE1-211ENST00000413186 PERM1Q5SV97 790 aa7.9□□□□□ -1.14
SYNE1-211ENST00000413186 NIPAL3Q6P499 406 aa7.9□□□□□ -1.14
SYNE1-211ENST00000413186 MED25Q71SY5 747 aa7.9□□□□□ -1.14
SYNE1-211ENST00000413186 WDR53Q7Z5U6 358 aaPredicted RBP7.9□□□□□ -1.14
SYNE1-211ENST00000413186 MEIOBQ8N635 442 aa7.9□□□□□ -1.14
SYNE1-211ENST00000413186 SLC16A11Q8NCK7 471 aa7.9□□□□□ -1.14
SYNE1-211ENST00000413186 LRRC46Q96FV0 321 aa7.9□□□□□ -1.14
SYNE1-211ENST00000413186 FAM60AQ9NP50 221 aa7.9□□□□□ -1.14
SYNE1-211ENST00000413186 OLAHQ9NV23 265 aa7.9□□□□□ -1.14
SYNE1-211ENST00000413186 POLHQ9Y253 713 aa7.9□□□□□ -1.14
SYNE1-211ENST00000413186 PLXNA4Q9HCM2 1894 aa7.9□□□□□ -1.14
SYNE1-211ENST00000413186 DNAH12Q6ZR08 3092 aa7.9□□□□□ -1.14
SYNE1-211ENST00000413186 B4E171 279 aa7.9□□□□□ -1.14
SYNE1-211ENST00000413186 P2RX6O15547 441 aa7.9□□□□□ -1.14
SYNE1-211ENST00000413186 ADORA3P0DMS8 318 aa7.9□□□□□ -1.14
SYNE1-211ENST00000413186 CD82P27701 267 aa7.9□□□□□ -1.14
SYNE1-211ENST00000413186 FMO3P31513 532 aa7.9□□□□□ -1.14
SYNE1-211ENST00000413186 TSPAN7P41732 249 aa7.9□□□□□ -1.14
SYNE1-211ENST00000413186 CYB561P49447 251 aa7.9□□□□□ -1.14
SYNE1-211ENST00000413186 YBX1P67809 324 aaKnown RBP7.9□□□□□ -1.14
SYNE1-211ENST00000413186 GINS1Q14691 196 aa7.9□□□□□ -1.14
SYNE1-211ENST00000413186 CSRP2Q16527 193 aa7.9□□□□□ -1.14
SYNE1-211ENST00000413186 ZNF750Q32MQ0 723 aa7.9□□□□□ -1.14
SYNE1-211ENST00000413186 TRMT12Q53H54 448 aaKnown RBP7.9□□□□□ -1.14
SYNE1-211ENST00000413186 KCNIP4Q6PIL6 250 aa7.9□□□□□ -1.14
SYNE1-211ENST00000413186 ZNF367Q7RTV3 350 aa7.9□□□□□ -1.14
SYNE1-211ENST00000413186 ABCA7Q8IZY2 2146 aa7.9□□□□□ -1.14
SYNE1-211ENST00000413186 PROKR2Q8NFJ6 384 aa7.9□□□□□ -1.14
SYNE1-211ENST00000413186 OR8J1Q8NGP2 316 aa7.9□□□□□ -1.14
SYNE1-211ENST00000413186 TRUB1Q8WWH5 349 aaKnown RBP7.9□□□□□ -1.14
SYNE1-211ENST00000413186 ACOT11Q8WXI4 607 aaPredicted RBP7.9□□□□□ -1.14
SYNE1-211ENST00000413186 C12orf43Q96C57 262 aaKnown RBP7.9□□□□□ -1.14
SYNE1-211ENST00000413186 ZNF649Q9BS31 505 aa7.9□□□□□ -1.14
SYNE1-211ENST00000413186 KLF15Q9UIH9 416 aa7.9□□□□□ -1.14
SYNE1-211ENST00000413186 CASKO14936 926 aa7.9□□□□□ -1.15
SYNE1-211ENST00000413186 FUCA1P04066 466 aa7.9□□□□□ -1.15
SYNE1-211ENST00000413186 ITIH1P19827 911 aa7.9□□□□□ -1.15
SYNE1-211ENST00000413186 PRKACGP22612 351 aa7.9□□□□□ -1.15
SYNE1-211ENST00000413186 MAGEB1P43366 347 aa7.9□□□□□ -1.15
SYNE1-211ENST00000413186 BTG2P78543 158 aa7.9□□□□□ -1.15
SYNE1-211ENST00000413186 MYBPC1Q00872 1141 aa7.9□□□□□ -1.15
SYNE1-211ENST00000413186 ZNF385BQ569K4 471 aa7.9□□□□□ -1.15
SYNE1-211ENST00000413186 ZNF675Q8TD23 568 aa7.9□□□□□ -1.15
SYNE1-211ENST00000413186 TSLPQ969D9 159 aa7.9□□□□□ -1.15
SYNE1-211ENST00000413186 CNRIP1Q96F85 164 aaPredicted RBP7.9□□□□□ -1.15
SYNE1-211ENST00000413186 PHF12Q96QT6 1004 aa7.9□□□□□ -1.15
SYNE1-211ENST00000413186 KCNS2Q9ULS6 477 aa7.9□□□□□ -1.15
SYNE1-211ENST00000413186 PCDHGB5Q9Y5G0 923 aa7.9□□□□□ -1.15
SYNE1-211ENST00000413186 GXYLT2A0PJZ3 443 aa7.9□□□□□ -1.15
SYNE1-211ENST00000413186 OIP5O43482 229 aa7.9□□□□□ -1.15
SYNE1-211ENST00000413186 UTS2O95399 124 aa7.9□□□□□ -1.15
SYNE1-211ENST00000413186 ITGAMP11215 1152 aa7.9□□□□□ -1.15
SYNE1-211ENST00000413186 RPL35P42766 123 aaKnown RBP7.9□□□□□ -1.15
SYNE1-211ENST00000413186 CDH15P55291 814 aa7.9□□□□□ -1.15
SYNE1-211ENST00000413186 TPTEP56180 551 aa7.9□□□□□ -1.15
SYNE1-211ENST00000413186 PDE7AQ13946 482 aa7.9□□□□□ -1.15
SYNE1-211ENST00000413186 RHEBQ15382 184 aa7.9□□□□□ -1.15
SYNE1-211ENST00000413186 MEP1AQ16819 746 aa7.9□□□□□ -1.15
SYNE1-211ENST00000413186 SLC36A3Q495N2 470 aa7.9□□□□□ -1.15
SYNE1-211ENST00000413186 MRPL2Q5T653 305 aaKnown RBP7.9□□□□□ -1.15
SYNE1-211ENST00000413186 GID4Q8IVV7 300 aa7.9□□□□□ -1.15
SYNE1-211ENST00000413186 SETD6Q8TBK2 473 aa7.9□□□□□ -1.15
SYNE1-211ENST00000413186 COG8Q96MW5 612 aa7.9□□□□□ -1.15
SYNE1-211ENST00000413186 EXOSC1Q9Y3B2 195 aaKnown RBP7.9□□□□□ -1.15
SYNE1-211ENST00000413186 NPFFR2Q9Y5X5 522 aa7.9□□□□□ -1.15
SYNE1-211ENST00000413186 IGHV5-10-1A0A0J9YXX1 117 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 KLRC4-KLRK1H3BQV0 150 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 EIF4E2O60573 245 aaKnown RBP7.89□□□□□ -1.15
SYNE1-211ENST00000413186 TACSTD2P09758 323 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 MAN2A2P49641 1150 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 HNRNPFP52597 415 aaKnown RBP7.89□□□□□ -1.15
SYNE1-211ENST00000413186 CTBP2P56545 445 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 SLC26A5P58743 744 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 PRPS1P60891 318 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 PPP1CAP62136 330 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 FOXC1Q12948 553 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 GAB1Q13480 694 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 PIN1Q13526 163 aaPredicted RBP7.89□□□□□ -1.15
SYNE1-211ENST00000413186 QPRTQ15274 297 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 PROX2Q3B8N5 592 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 ADPRMQ3LIE5 342 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 MTFR2Q6P444 385 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 ARHGAP11AQ6P4F7 1023 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 ZNF793Q6ZN11 406 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 DND1Q8IYX4 353 aaKnown RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms