RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 IDSP22304 550 aa3.76□□□□□ -1.81
CLK1-203ENST00000409769 AK4P27144 223 aaPredicted RBP3.76□□□□□ -1.81
CLK1-203ENST00000409769 BDKRB1P46663 353 aa3.76□□□□□ -1.81
CLK1-203ENST00000409769 SLC6A12P48065 614 aa3.76□□□□□ -1.81
CLK1-203ENST00000409769 DHPSP49366 369 aaPredicted RBP3.76□□□□□ -1.81
CLK1-203ENST00000409769 CSNK1EP49674 416 aaKnown RBP3.76□□□□□ -1.81
CLK1-203ENST00000409769 CDH13P55290 713 aa3.76□□□□□ -1.81
CLK1-203ENST00000409769 AP1S2P56377 157 aa3.76□□□□□ -1.81
CLK1-203ENST00000409769 B3GALT5-AS1P59052 145 aa3.76□□□□□ -1.81
CLK1-203ENST00000409769 HERV-K104P61576 105 aa3.76□□□□□ -1.81
CLK1-203ENST00000409769 HERVK_113P63132 956 aa3.76□□□□□ -1.81
CLK1-203ENST00000409769 MAT1AQ00266 395 aaKnown RBP3.76□□□□□ -1.81
CLK1-203ENST00000409769 BST1Q10588 318 aa3.76□□□□□ -1.81
CLK1-203ENST00000409769 SNAPC1Q16533 368 aa3.76□□□□□ -1.81
CLK1-203ENST00000409769 CCSMST1Q4G0I0 132 aa3.76□□□□□ -1.81
CLK1-203ENST00000409769 UNC50Q53HI1 259 aa3.76□□□□□ -1.81
CLK1-203ENST00000409769 ZNF678Q5SXM1 525 aa3.76□□□□□ -1.81
CLK1-203ENST00000409769 LCE3CQ5T5A8 94 aa3.76□□□□□ -1.81
CLK1-203ENST00000409769 HHATQ5VTY9 493 aa3.76□□□□□ -1.81
CLK1-203ENST00000409769 TTC19Q6DKK2 380 aaPredicted RBP3.76□□□□□ -1.81
CLK1-203ENST00000409769 SULT1C3Q6IMI6 304 aa3.76□□□□□ -1.81
CLK1-203ENST00000409769 TTC23LQ6PF05 361 aa3.76□□□□□ -1.81
CLK1-203ENST00000409769 UNC5DQ6UXZ4 953 aa3.76□□□□□ -1.81
CLK1-203ENST00000409769 MBOAT1Q6ZNC8 495 aa3.76□□□□□ -1.81
CLK1-203ENST00000409769 ZCCHC23Q6ZST2 131 aa3.76□□□□□ -1.81
CLK1-203ENST00000409769 C17orf82Q86X59 251 aaPredicted RBP3.76□□□□□ -1.81
CLK1-203ENST00000409769 NUDCD3Q8IVD9 361 aa3.76□□□□□ -1.81
CLK1-203ENST00000409769 SLC22A9Q8IVM8 553 aa3.76□□□□□ -1.81
CLK1-203ENST00000409769 ZNF595Q8IYB9 648 aa3.76□□□□□ -1.81
CLK1-203ENST00000409769 LSMEM2Q8N112 164 aa3.76□□□□□ -1.81
CLK1-203ENST00000409769 CCDC63Q8NA47 563 aa3.76□□□□□ -1.81
CLK1-203ENST00000409769 AVL9Q8NBF6 648 aa3.76□□□□□ -1.81
CLK1-203ENST00000409769 NPEPL1Q8NDH3 523 aa3.76□□□□□ -1.81
CLK1-203ENST00000409769 OR5K2Q8NHB8 316 aa3.76□□□□□ -1.81
CLK1-203ENST00000409769 CFAP61Q8NHU2 1237 aa3.76□□□□□ -1.81
CLK1-203ENST00000409769 ZNF75CPQ92670 426 aaPredicted RBP3.76□□□□□ -1.81
CLK1-203ENST00000409769 CCDC126Q96EE4 140 aa3.76□□□□□ -1.81
CLK1-203ENST00000409769 ABHD1Q96SE0 405 aa3.76□□□□□ -1.81
CLK1-203ENST00000409769 ERVK-6Q9BXR3 956 aa3.76□□□□□ -1.81
CLK1-203ENST00000409769 CAPS2Q9BXY5 557 aa3.76□□□□□ -1.81
CLK1-203ENST00000409769 GSDMCQ9BYG8 508 aa3.76□□□□□ -1.81
CLK1-203ENST00000409769 C20orf27Q9GZN8 174 aa3.76□□□□□ -1.81
CLK1-203ENST00000409769 DRC3Q9H069 523 aa3.76□□□□□ -1.81
CLK1-203ENST00000409769 WWP1Q9H0M0 922 aa3.76□□□□□ -1.81
CLK1-203ENST00000409769 ERVMER34-1Q9H9K5 563 aa3.76□□□□□ -1.81
CLK1-203ENST00000409769 PARVBQ9HBI1 364 aa3.76□□□□□ -1.81
CLK1-203ENST00000409769 SERINC1Q9NRX5 453 aa3.76□□□□□ -1.81
CLK1-203ENST00000409769 FGF21Q9NSA1 209 aa3.76□□□□□ -1.81
CLK1-203ENST00000409769 PTBP2Q9UKA9 531 aaKnown RBP3.76□□□□□ -1.81
CLK1-203ENST00000409769 TMCO1Q9UM00 188 aa3.76□□□□□ -1.81
CLK1-203ENST00000409769 KCNK6Q9Y257 313 aa3.76□□□□□ -1.81
CLK1-203ENST00000409769 COL5A1P20908 1838 aaPredicted RBP3.75□□□□□ -1.81
CLK1-203ENST00000409769 MYO15AQ9UKN7 3530 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 A0A1W2PPQ1 181 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 A0A1W2PPV9 198 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 KRT87PA6NCN2 255 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 PCNX2A6NKB5 2137 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 TCP11X1B4DZS4 312 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 SUPT3HB4E1H0 165 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 E2F3O00716 465 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 UBFD1O14562 309 aaKnown RBP3.75□□□□□ -1.81
CLK1-203ENST00000409769 ZNF195O14628 629 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 EDF1O60869 148 aaKnown RBP3.75□□□□□ -1.81
CLK1-203ENST00000409769 SMIM24O75264 130 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 SUPT3HO75486 399 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 KHDRBS3O75525 346 aaKnown RBP3.75□□□□□ -1.81
CLK1-203ENST00000409769 LYPLA1O75608 230 aaPredicted RBP3.75□□□□□ -1.81
CLK1-203ENST00000409769 SIX3O95343 332 aaPredicted RBP3.75□□□□□ -1.81
CLK1-203ENST00000409769 TGDSO95455 350 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 GUCA1CO95843 209 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 SLC16A8O95907 504 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 NGFP01138 241 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 CATP04040 527 aaKnown RBP3.75□□□□□ -1.81
CLK1-203ENST00000409769 CHRNGP07510 517 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 ANXA5P08758 320 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 HIST1H2AGP0C0S8 130 aaPredicted RBP3.75□□□□□ -1.81
CLK1-203ENST00000409769 SLC35G4P0C7Q5 338 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 GNSP15586 552 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 XRCC1P18887 633 aaPredicted RBP3.75□□□□□ -1.81
CLK1-203ENST00000409769 EPORP19235 508 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 IL11P20809 199 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 IMPA1P29218 277 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 EEF1DP29692 281 aaKnown RBP3.75□□□□□ -1.81
CLK1-203ENST00000409769 PKLRP30613 574 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 SERPINB5P36952 375 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 ACTR1BP42025 376 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 CCR10P46092 362 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 HNMTP50135 292 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 PDX1P52945 283 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 ACTR1AP61163 376 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 ABCE1P61221 599 aaKnown RBP3.75□□□□□ -1.81
CLK1-203ENST00000409769 NAA20P61599 178 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 GNGT1P63211 74 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 UBE2IP63279 158 aaKnown RBP3.75□□□□□ -1.81
CLK1-203ENST00000409769 ABRQ12979 859 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 HSPB3Q12988 150 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 RCN2Q14257 317 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 ARHGAP19Q14CB8 494 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 CHI3L2Q15782 390 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 CTU2Q2VPK5 515 aaKnown RBP3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms