RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 PITX2Q99697 317 aa11.53□□□□□ -0.56
CHRNA1-205ENST00000409542 APOL4Q9BPW4 351 aa11.53□□□□□ -0.56
CHRNA1-205ENST00000409542 SORBS1Q9BX66 1292 aaKnown RBP11.53□□□□□ -0.56
CHRNA1-205ENST00000409542 PITHD1Q9GZP4 211 aaPredicted RBP11.53□□□□□ -0.56
CHRNA1-205ENST00000409542 OR51B5Q9H339 312 aa11.53□□□□□ -0.56
CHRNA1-205ENST00000409542 LYRM4Q9HD34 91 aa11.53□□□□□ -0.56
CHRNA1-205ENST00000409542 QPCTLQ9NXS2 382 aa11.53□□□□□ -0.56
CHRNA1-205ENST00000409542 AHSPQ9NZD4 102 aa11.53□□□□□ -0.56
CHRNA1-205ENST00000409542 COPS7AQ9UBW8 275 aa11.53□□□□□ -0.56
CHRNA1-205ENST00000409542 PCDHGB1Q9Y5G3 927 aa11.53□□□□□ -0.56
CHRNA1-205ENST00000409542 SNX5Q9Y5X3 404 aa11.53□□□□□ -0.56
CHRNA1-205ENST00000409542 WASHC1A8K0Z3 465 aa11.52□□□□□ -0.56
CHRNA1-205ENST00000409542 TMEM229AB2RXF0 380 aa11.52□□□□□ -0.56
CHRNA1-205ENST00000409542 MITFO75030 526 aaPredicted RBP11.52□□□□□ -0.56
CHRNA1-205ENST00000409542 TRIM3O75382 744 aaPredicted RBP11.52□□□□□ -0.56
CHRNA1-205ENST00000409542 PRKRAO75569 313 aaKnown RBP11.52□□□□□ -0.56
CHRNA1-205ENST00000409542 KRT75O95678 551 aa11.52□□□□□ -0.56
CHRNA1-205ENST00000409542 C6orf47O95873 294 aa11.52□□□□□ -0.56
CHRNA1-205ENST00000409542 TGFB1P01137 390 aa11.52□□□□□ -0.56
CHRNA1-205ENST00000409542 FBXO45P0C2W1 286 aa11.52□□□□□ -0.56
CHRNA1-205ENST00000409542 DDX5P17844 614 aaKnown RBP11.52□□□□□ -0.56
CHRNA1-205ENST00000409542 STT3AP46977 705 aa11.52□□□□□ -0.56
CHRNA1-205ENST00000409542 HBA1P69905 142 aa11.52□□□□□ -0.56
CHRNA1-205ENST00000409542 FNDC7Q5VTL7 733 aa11.52□□□□□ -0.56
CHRNA1-205ENST00000409542 NSUN5P2Q63ZY6 315 aa11.52□□□□□ -0.56
CHRNA1-205ENST00000409542 PLXDC2Q6UX71 529 aa11.52□□□□□ -0.56
CHRNA1-205ENST00000409542 GALNT10Q86SR1 603 aa11.52□□□□□ -0.56
CHRNA1-205ENST00000409542 LACC1Q8IV20 430 aa11.52□□□□□ -0.56
CHRNA1-205ENST00000409542 NATD1Q8N6N6 113 aa11.52□□□□□ -0.56
CHRNA1-205ENST00000409542 ACOT4Q8N9L9 421 aa11.52□□□□□ -0.56
CHRNA1-205ENST00000409542 SLC22A8Q8TCC7 542 aa11.52□□□□□ -0.56
CHRNA1-205ENST00000409542 LRRC46Q96FV0 321 aa11.52□□□□□ -0.56
CHRNA1-205ENST00000409542 TRIB1Q96RU8 372 aa11.52□□□□□ -0.56
CHRNA1-205ENST00000409542 NODALQ96S42 347 aa11.52□□□□□ -0.56
CHRNA1-205ENST00000409542 ZNF347Q96SE7 839 aa11.52□□□□□ -0.56
CHRNA1-205ENST00000409542 SLC35A5Q9BS91 424 aa11.52□□□□□ -0.56
CHRNA1-205ENST00000409542 YIPF4Q9BSR8 244 aa11.52□□□□□ -0.56
CHRNA1-205ENST00000409542 PRDM14Q9GZV8 571 aa11.52□□□□□ -0.56
CHRNA1-205ENST00000409542 RIBC2Q9H4K1 309 aa11.52□□□□□ -0.56
CHRNA1-205ENST00000409542 BEX4Q9NWD9 120 aaPredicted RBP11.52□□□□□ -0.56
CHRNA1-205ENST00000409542 THUMPD1Q9NXG2 353 aaKnown RBP11.52□□□□□ -0.56
CHRNA1-205ENST00000409542 PDP1Q9P0J1 537 aaPredicted RBP11.52□□□□□ -0.56
CHRNA1-205ENST00000409542 FOXD3Q9UJU5 478 aaPredicted RBP11.52□□□□□ -0.56
CHRNA1-205ENST00000409542 NDRG4Q9ULP0 352 aaKnown RBP11.52□□□□□ -0.56
CHRNA1-205ENST00000409542 CAMK2AQ9UQM7 478 aa11.52□□□□□ -0.56
CHRNA1-205ENST00000409542 CSPG4Q6UVK1 2322 aa11.52□□□□□ -0.57
CHRNA1-205ENST00000409542 SYNDIG1LA6NDD5 238 aa11.51□□□□□ -0.57
CHRNA1-205ENST00000409542 EEF1E1-BLOC1S5C9J1V9 151 aa11.51□□□□□ -0.57
CHRNA1-205ENST00000409542 H7C1Q1 480 aa11.51□□□□□ -0.57
CHRNA1-205ENST00000409542 SAP18O00422 153 aaKnown RBP11.51□□□□□ -0.57
CHRNA1-205ENST00000409542 EEF1E1O43324 174 aaKnown RBP11.51□□□□□ -0.57
CHRNA1-205ENST00000409542 GCM2O75603 506 aaPredicted RBP11.51□□□□□ -0.57
CHRNA1-205ENST00000409542 TRAPPC6AO75865 159 aa11.51□□□□□ -0.57
CHRNA1-205ENST00000409542 ANGPTL1O95841 491 aa11.51□□□□□ -0.57
CHRNA1-205ENST00000409542 CLPSP04118 112 aa11.51□□□□□ -0.57
CHRNA1-205ENST00000409542 KLK1P06870 262 aa11.51□□□□□ -0.57
CHRNA1-205ENST00000409542 MATN1P21941 496 aa11.51□□□□□ -0.57
CHRNA1-205ENST00000409542 CPN2P22792 545 aa11.51□□□□□ -0.57
CHRNA1-205ENST00000409542 CTSSP25774 331 aa11.51□□□□□ -0.57
CHRNA1-205ENST00000409542 GSTM5P46439 218 aa11.51□□□□□ -0.57
CHRNA1-205ENST00000409542 CLK3P49761 638 aaKnown RBP11.51□□□□□ -0.57
CHRNA1-205ENST00000409542 SELENOWP63302 87 aa11.51□□□□□ -0.57
CHRNA1-205ENST00000409542 IL5RAQ01344 420 aa11.51□□□□□ -0.57
CHRNA1-205ENST00000409542 FOXF2Q12947 444 aa11.51□□□□□ -0.57
CHRNA1-205ENST00000409542 IFI44LQ53G44 452 aa11.51□□□□□ -0.57
CHRNA1-205ENST00000409542 VASNQ6EMK4 673 aa11.51□□□□□ -0.57
CHRNA1-205ENST00000409542 GALNT5Q7Z7M9 940 aa11.51□□□□□ -0.57
CHRNA1-205ENST00000409542 TSPYL5Q86VY4 417 aaPredicted RBP11.51□□□□□ -0.57
CHRNA1-205ENST00000409542 KIF18BQ86Y91 864 aa11.51□□□□□ -0.57
CHRNA1-205ENST00000409542 CROCCP3Q8IVE0 287 aa11.51□□□□□ -0.57
CHRNA1-205ENST00000409542 SLC15A4Q8N697 577 aa11.51□□□□□ -0.57
CHRNA1-205ENST00000409542 C9orf106Q8NAJ2 232 aa11.51□□□□□ -0.57
CHRNA1-205ENST00000409542 ZNF764Q96H86 408 aaPredicted RBP11.51□□□□□ -0.57
CHRNA1-205ENST00000409542 WDYHV1Q96HA8 205 aa11.51□□□□□ -0.57
CHRNA1-205ENST00000409542 TPD52L3Q96J77 140 aa11.51□□□□□ -0.57
CHRNA1-205ENST00000409542 COX4I2Q96KJ9 171 aa11.51□□□□□ -0.57
CHRNA1-205ENST00000409542 GNRHR2Q96P88 292 aa11.51□□□□□ -0.57
CHRNA1-205ENST00000409542 DGAT2Q96PD7 388 aa11.51□□□□□ -0.57
CHRNA1-205ENST00000409542 GAL3ST4Q96RP7 486 aa11.51□□□□□ -0.57
CHRNA1-205ENST00000409542 BCL7BQ9BQE9 202 aa11.51□□□□□ -0.57
CHRNA1-205ENST00000409542 MS4A8Q9BY19 250 aa11.51□□□□□ -0.57
CHRNA1-205ENST00000409542 GABARAPL3Q9BY60 117 aa11.51□□□□□ -0.57
CHRNA1-205ENST00000409542 NAA50Q9GZZ1 169 aaKnown RBP11.51□□□□□ -0.57
CHRNA1-205ENST00000409542 UBQLN3Q9H347 655 aa11.51□□□□□ -0.57
CHRNA1-205ENST00000409542 PLGRKTQ9HBL7 147 aa11.51□□□□□ -0.57
CHRNA1-205ENST00000409542 KRT84Q9NSB2 600 aa11.51□□□□□ -0.57
CHRNA1-205ENST00000409542 GPATCH2Q9NW75 528 aa11.51□□□□□ -0.57
CHRNA1-205ENST00000409542 TAS2R9Q9NYW1 312 aa11.51□□□□□ -0.57
CHRNA1-205ENST00000409542 CNIH4Q9P003 139 aa11.51□□□□□ -0.57
CHRNA1-205ENST00000409542 KIF17Q9P2E2 1029 aa11.51□□□□□ -0.57
CHRNA1-205ENST00000409542 TPRKBQ9Y3C4 175 aa11.51□□□□□ -0.57
CHRNA1-205ENST00000409542 GMPPBQ9Y5P6 360 aa11.51□□□□□ -0.57
CHRNA1-205ENST00000409542 A0A1B0GVG6 124 aa11.51□□□□□ -0.57
CHRNA1-205ENST00000409542 A0A1W2PRB8 838 aa11.51□□□□□ -0.57
CHRNA1-205ENST00000409542 MBD3L4A6NDZ8 208 aaPredicted RBP11.51□□□□□ -0.57
CHRNA1-205ENST00000409542 MBD3L3A6NE82 208 aaPredicted RBP11.51□□□□□ -0.57
CHRNA1-205ENST00000409542 MBD3L5A6NJ08 208 aaPredicted RBP11.51□□□□□ -0.57
CHRNA1-205ENST00000409542 SMAD7O15105 426 aaKnown RBP11.51□□□□□ -0.57
CHRNA1-205ENST00000409542 ADAMDEC1O15204 470 aa11.51□□□□□ -0.57
CHRNA1-205ENST00000409542 IFNA14P01570 189 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms