RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 C12orf73Q69YU5 71 aa7.72□□□□□ -1.17
SNX13-201ENST00000409076 ZNF770Q6IQ21 691 aaPredicted RBP7.72□□□□□ -1.17
SNX13-201ENST00000409076 CFAP77Q6ZQR2 320 aa7.72□□□□□ -1.17
SNX13-201ENST00000409076 C17orf107Q6ZR85 190 aa7.72□□□□□ -1.17
SNX13-201ENST00000409076 OR11H7Q8NGC8 314 aa7.72□□□□□ -1.17
SNX13-201ENST00000409076 ELP4Q96EB1 424 aa7.72□□□□□ -1.17
SNX13-201ENST00000409076 ADAD1Q96M93 576 aaKnown RBP7.72□□□□□ -1.17
SNX13-201ENST00000409076 LYSMD1Q96S90 227 aa7.72□□□□□ -1.17
SNX13-201ENST00000409076 TMEM43Q9BTV4 400 aa7.72□□□□□ -1.17
SNX13-201ENST00000409076 TMEM106CQ9BVX2 250 aa7.72□□□□□ -1.17
SNX13-201ENST00000409076 SGPP1Q9BX95 441 aa7.72□□□□□ -1.17
SNX13-201ENST00000409076 ACTR6Q9GZN1 396 aa7.72□□□□□ -1.17
SNX13-201ENST00000409076 OR52A5Q9H2C5 316 aa7.72□□□□□ -1.17
SNX13-201ENST00000409076 NOX4Q9NPH5 578 aa7.72□□□□□ -1.17
SNX13-201ENST00000409076 ZNF443Q9Y2A4 671 aaPredicted RBP7.72□□□□□ -1.17
SNX13-201ENST00000409076 LSM2Q9Y333 95 aaKnown RBP7.72□□□□□ -1.17
SNX13-201ENST00000409076 A0A0A6YYC8 382 aaPredicted RBP7.72□□□□□ -1.17
SNX13-201ENST00000409076 TMEM72A0PK05 275 aa7.72□□□□□ -1.17
SNX13-201ENST00000409076 TSPAN11A1L157 253 aa7.72□□□□□ -1.17
SNX13-201ENST00000409076 ANXA2P2A6NMY6 339 aa7.72□□□□□ -1.17
SNX13-201ENST00000409076 I3L1I5 382 aaPredicted RBP7.72□□□□□ -1.17
SNX13-201ENST00000409076 CDC40O60508 579 aaKnown RBP eCLIP7.72□□□□□ -1.17
SNX13-201ENST00000409076 TBX6O95947 436 aaPredicted RBP7.72□□□□□ -1.17
SNX13-201ENST00000409076 ANXA2P07355 339 aaKnown RBP7.72□□□□□ -1.17
SNX13-201ENST00000409076 TMIGD3P0DMS9 266 aaPredicted RBP7.72□□□□□ -1.17
SNX13-201ENST00000409076 ACADMP11310 421 aa7.72□□□□□ -1.17
SNX13-201ENST00000409076 GSTM3P21266 225 aa7.72□□□□□ -1.17
SNX13-201ENST00000409076 DCTDP32321 178 aa7.72□□□□□ -1.17
SNX13-201ENST00000409076 PRDX1Q06830 199 aaKnown RBP7.72□□□□□ -1.17
SNX13-201ENST00000409076 TANGO2Q6ICL3 276 aa7.72□□□□□ -1.17
SNX13-201ENST00000409076 KIAA1211LQ6NV74 962 aa7.72□□□□□ -1.17
SNX13-201ENST00000409076 ZNF782Q6ZMW2 699 aaPredicted RBP7.72□□□□□ -1.17
SNX13-201ENST00000409076 RTL4Q6ZR62 310 aa7.72□□□□□ -1.17
SNX13-201ENST00000409076 OR4K14Q8NGD5 310 aa7.72□□□□□ -1.17
SNX13-201ENST00000409076 OR9A4Q8NGU2 314 aa7.72□□□□□ -1.17
SNX13-201ENST00000409076 OR5K2Q8NHB8 316 aa7.72□□□□□ -1.17
SNX13-201ENST00000409076 PHOSPHO1Q8TCT1 267 aa7.72□□□□□ -1.17
SNX13-201ENST00000409076 PPP1R14AQ96A00 147 aa7.72□□□□□ -1.17
SNX13-201ENST00000409076 CPNE2Q96FN4 548 aaPredicted RBP7.72□□□□□ -1.17
SNX13-201ENST00000409076 ARHGAP9Q9BRR9 750 aa7.72□□□□□ -1.17
SNX13-201ENST00000409076 SLA2Q9H6Q3 261 aa7.72□□□□□ -1.17
SNX13-201ENST00000409076 TCF7L1Q9HCS4 588 aa7.72□□□□□ -1.17
SNX13-201ENST00000409076 SLC6A20Q9NP91 592 aa7.72□□□□□ -1.17
SNX13-201ENST00000409076 PNO1Q9NRX1 252 aaKnown RBP7.72□□□□□ -1.17
SNX13-201ENST00000409076 TMEM45AQ9NWC5 275 aa7.72□□□□□ -1.17
SNX13-201ENST00000409076 HRKO00198 91 aa7.72□□□□□ -1.17
SNX13-201ENST00000409076 FOXE1O00358 373 aaPredicted RBP7.72□□□□□ -1.17
SNX13-201ENST00000409076 STK25O00506 426 aa7.72□□□□□ -1.17
SNX13-201ENST00000409076 OR6A2O95222 327 aa7.72□□□□□ -1.17
SNX13-201ENST00000409076 KAT7O95251 611 aa7.72□□□□□ -1.17
SNX13-201ENST00000409076 ANKRD34CP0C6C1 535 aa7.72□□□□□ -1.17
SNX13-201ENST00000409076 ZNF3P17036 446 aa7.72□□□□□ -1.17
SNX13-201ENST00000409076 ATF1P18846 271 aa7.72□□□□□ -1.17
SNX13-201ENST00000409076 SNRPGP62308 76 aaKnown RBP7.72□□□□□ -1.17
SNX13-201ENST00000409076 TSPAN31Q12999 210 aa7.72□□□□□ -1.17
SNX13-201ENST00000409076 BIKQ13323 160 aa7.72□□□□□ -1.17
SNX13-201ENST00000409076 EXOSC2Q13868 293 aaKnown RBP7.72□□□□□ -1.17
SNX13-201ENST00000409076 SF3A2Q15428 464 aaKnown RBP7.72□□□□□ -1.17
SNX13-201ENST00000409076 HNRNPA1L2Q32P51 320 aaKnown RBP7.72□□□□□ -1.17
SNX13-201ENST00000409076 GLYR1Q49A26 553 aaPredicted RBP7.72□□□□□ -1.17
SNX13-201ENST00000409076 HSD17B12Q53GQ0 312 aa7.72□□□□□ -1.17
SNX13-201ENST00000409076 FAM78AQ5JUQ0 283 aa7.72□□□□□ -1.17
SNX13-201ENST00000409076 TMEM69Q5SWH9 247 aa7.72□□□□□ -1.17
SNX13-201ENST00000409076 MFSD12Q6NUT3 480 aa7.72□□□□□ -1.17
SNX13-201ENST00000409076 LEG1Q6P5S2 330 aa7.72□□□□□ -1.17
SNX13-201ENST00000409076 WDR88Q6ZMY6 472 aa7.72□□□□□ -1.17
SNX13-201ENST00000409076 TMEM91Q6ZNR0 172 aa7.72□□□□□ -1.17
SNX13-201ENST00000409076 LRRC25Q8N386 305 aaPredicted RBP7.72□□□□□ -1.17
SNX13-201ENST00000409076 CPXM2Q8N436 756 aa7.72□□□□□ -1.17
SNX13-201ENST00000409076 OR52I2Q8NH67 350 aa7.72□□□□□ -1.17
SNX13-201ENST00000409076 RLN3Q8WXF3 142 aa7.72□□□□□ -1.17
SNX13-201ENST00000409076 ACOT11Q8WXI4 607 aaPredicted RBP7.72□□□□□ -1.17
SNX13-201ENST00000409076 BADQ92934 168 aa7.72□□□□□ -1.17
SNX13-201ENST00000409076 MS4A6EQ96DS6 147 aa7.72□□□□□ -1.17
SNX13-201ENST00000409076 SIGLEC11Q96RL6 698 aa7.72□□□□□ -1.17
SNX13-201ENST00000409076 PTDSS2Q9BVG9 487 aa7.72□□□□□ -1.17
SNX13-201ENST00000409076 PAK6Q9NQU5 681 aaPredicted RBP7.72□□□□□ -1.17
SNX13-201ENST00000409076 TAS2R10Q9NYW0 307 aa7.72□□□□□ -1.17
SNX13-201ENST00000409076 GLTPQ9NZD2 209 aa7.72□□□□□ -1.17
SNX13-201ENST00000409076 TBC1D29Q9UFV1 150 aa7.72□□□□□ -1.17
SNX13-201ENST00000409076 CBLCQ9ULV8 474 aa7.72□□□□□ -1.17
SNX13-201ENST00000409076 TRIOBPQ9H2D6 2365 aa7.72□□□□□ -1.17
SNX13-201ENST00000409076 DCDC2BA2VCK2 349 aa7.71□□□□□ -1.17
SNX13-201ENST00000409076 FKTNO75072 461 aa7.71□□□□□ -1.17
SNX13-201ENST00000409076 RFPL3O75679 317 aa7.71□□□□□ -1.17
SNX13-201ENST00000409076 FOXK2Q01167 660 aa7.71□□□□□ -1.17
SNX13-201ENST00000409076 HSF2Q03933 536 aa7.71□□□□□ -1.17
SNX13-201ENST00000409076 GRK1Q15835 563 aa7.71□□□□□ -1.17
SNX13-201ENST00000409076 ST3GAL2Q16842 350 aa7.71□□□□□ -1.17
SNX13-201ENST00000409076 KCTD9Q7L273 389 aa7.71□□□□□ -1.17
SNX13-201ENST00000409076 TAF8Q7Z7C8 310 aa7.71□□□□□ -1.17
SNX13-201ENST00000409076 FAM26EQ8N5C1 309 aa7.71□□□□□ -1.17
SNX13-201ENST00000409076 ZBTB44Q8NCP5 570 aa7.71□□□□□ -1.17
SNX13-201ENST00000409076 OR2A1Q8NGT9 310 aa7.71□□□□□ -1.17
SNX13-201ENST00000409076 ZFAND1Q8TCF1 268 aa7.71□□□□□ -1.17
SNX13-201ENST00000409076 ZPLD1Q8TCW7 415 aa7.71□□□□□ -1.17
SNX13-201ENST00000409076 WNT2BQ93097 391 aa7.71□□□□□ -1.17
SNX13-201ENST00000409076 TRIM43Q96BQ3 446 aaPredicted RBP7.71□□□□□ -1.17
SNX13-201ENST00000409076 TBC1D20Q96BZ9 403 aa7.71□□□□□ -1.17
SNX13-201ENST00000409076 HS6ST2Q96MM7 605 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 230.6 ms