RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 CNOT9Q92600 299 aaKnown RBP4.59□□□□□ -1.68
SMAD4-202ENST00000398417 FOXN4Q96NZ1 517 aa4.59□□□□□ -1.68
SMAD4-202ENST00000398417 FYTTD1Q96QD9 318 aaKnown RBP4.59□□□□□ -1.68
SMAD4-202ENST00000398417 CD180Q99467 661 aa4.59□□□□□ -1.68
SMAD4-202ENST00000398417 C19orf43Q9BQ61 176 aa4.59□□□□□ -1.68
SMAD4-202ENST00000398417 OR10A4Q9H209 315 aa4.59□□□□□ -1.68
SMAD4-202ENST00000398417 SLC28A3Q9HAS3 691 aa4.59□□□□□ -1.68
SMAD4-202ENST00000398417 ASB4Q9Y574 426 aa4.59□□□□□ -1.68
SMAD4-202ENST00000398417 ELK1P19419 428 aa4.59□□□□□ -1.68
SMAD4-202ENST00000398417 RAB3BP20337 219 aa4.59□□□□□ -1.68
SMAD4-202ENST00000398417 PSMD4P55036 377 aaKnown RBP4.59□□□□□ -1.68
SMAD4-202ENST00000398417 PCBP3P57721 371 aaKnown RBP4.59□□□□□ -1.68
SMAD4-202ENST00000398417 RPS15AP62244 130 aaKnown RBP4.59□□□□□ -1.68
SMAD4-202ENST00000398417 RPP30P78346 268 aaKnown RBP4.59□□□□□ -1.68
SMAD4-202ENST00000398417 IFITM2Q01629 132 aa4.59□□□□□ -1.68
SMAD4-202ENST00000398417 HSF2Q03933 536 aa4.59□□□□□ -1.68
SMAD4-202ENST00000398417 DPTQ07507 201 aa4.59□□□□□ -1.68
SMAD4-202ENST00000398417 CBFBQ13951 182 aa4.59□□□□□ -1.68
SMAD4-202ENST00000398417 CRMP1Q14194 572 aa4.59□□□□□ -1.68
SMAD4-202ENST00000398417 DUSP5Q16690 384 aa4.59□□□□□ -1.68
SMAD4-202ENST00000398417 AARDQ4LEZ3 155 aa4.59□□□□□ -1.68
SMAD4-202ENST00000398417 ESCO2Q56NI9 601 aa4.59□□□□□ -1.68
SMAD4-202ENST00000398417 FCRL6Q6DN72 434 aa4.59□□□□□ -1.68
SMAD4-202ENST00000398417 MBOAT2Q6ZWT7 520 aa4.59□□□□□ -1.68
SMAD4-202ENST00000398417 PRSS45Q7RTY3 260 aa4.59□□□□□ -1.68
SMAD4-202ENST00000398417 ACBD7Q8N6N7 88 aa4.59□□□□□ -1.68
SMAD4-202ENST00000398417 LILRB4Q8NHJ6 448 aa4.59□□□□□ -1.68
SMAD4-202ENST00000398417 PEX11GQ96HA9 241 aa4.59□□□□□ -1.68
SMAD4-202ENST00000398417 RPP25Q9BUL9 199 aaKnown RBP4.59□□□□□ -1.68
SMAD4-202ENST00000398417 TAPBPLQ9BX59 468 aa4.59□□□□□ -1.68
SMAD4-202ENST00000398417 HDAC8Q9BY41 377 aa4.59□□□□□ -1.68
SMAD4-202ENST00000398417 PITHD1Q9GZP4 211 aaPredicted RBP4.59□□□□□ -1.68
SMAD4-202ENST00000398417 PRTFDC1Q9NRG1 225 aa4.59□□□□□ -1.68
SMAD4-202ENST00000398417 ACAD8Q9UKU7 415 aa4.59□□□□□ -1.68
SMAD4-202ENST00000398417 LIPT1Q9Y234 373 aa4.59□□□□□ -1.68
SMAD4-202ENST00000398417 RASD1Q9Y272 281 aa4.59□□□□□ -1.68
SMAD4-202ENST00000398417 AK6Q9Y3D8 172 aaKnown RBP4.59□□□□□ -1.68
SMAD4-202ENST00000398417 FKBP7Q9Y680 259 aa4.59□□□□□ -1.68
SMAD4-202ENST00000398417 CENPVL1A0A0U1RR11 272 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 FGF17O60258 216 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 NOS1APO75052 506 aaPredicted RBP4.58□□□□□ -1.68
SMAD4-202ENST00000398417 HSBP1O75506 76 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 FPR3P25089 353 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 BMP8BP34820 402 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 ACSM3Q53FZ2 586 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 GPR155Q7Z3F1 870 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 FAM220AQ7Z4H9 259 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 BMP8AQ7Z5Y6 402 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 SERPINA12Q8IW75 414 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 BOLLQ8N9W6 283 aaKnown RBP4.58□□□□□ -1.68
SMAD4-202ENST00000398417 OR4M1Q8NGD0 313 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 ALG8Q9BVK2 526 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 OR2B2Q9GZK3 357 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 TNRC18O15417 2968 aaPredicted RBP4.58□□□□□ -1.68
SMAD4-202ENST00000398417 HEATR5AQ86XA9 2040 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 BLOC1S5-TXNDC5H3BN57 136 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 MT-ND4P03905 459 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 FBXO45P0C2W1 286 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 CHRNB1P11230 501 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 ADH7P40394 386 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 OR12D2P58182 307 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 C21orf58P58505 322 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 RPS21P63220 83 aaKnown RBP4.58□□□□□ -1.68
SMAD4-202ENST00000398417 P2RY14Q15391 338 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 ZNF79Q15937 498 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 FLYWCH1Q4VC44 716 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 METRNLQ641Q3 311 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 C3orf33Q6P1S2 294 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 PARM1Q6UWI2 310 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 FRRS1Q6ZNA5 592 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 SIRT6Q8N6T7 355 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 OR9A4Q8NGU2 314 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 GRPEL2Q8TAA5 225 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 LMX1AQ8TE12 382 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 HMGB4Q8WW32 186 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 SLC7A6Q92536 515 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 FGF20Q9NP95 211 aaPredicted RBP4.58□□□□□ -1.68
SMAD4-202ENST00000398417 PLEKHB1Q9UF11 243 aaPredicted RBP4.58□□□□□ -1.68
SMAD4-202ENST00000398417 CYP8B1Q9UNU6 501 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 A0A1W2PQ72 361 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 ANKRD34BA5PLL1 514 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 TVP23AA6NH52 213 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 ELOA3DA6NLF2 546 aaPredicted RBP4.58□□□□□ -1.68
SMAD4-202ENST00000398417 LALBAP00709 142 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 RAP2BP61225 183 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 ERVK-25P63136 954 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 FUT5Q11128 374 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 ARHGAP19Q14CB8 494 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 ELOA3BQ3SY89 546 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 CSNK1A1LQ8N752 337 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 ELOA3Q8NG57 546 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 OR6K6Q8NGW6 343 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 OR6N2Q8NGY6 317 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 ATF6BQ99941 703 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 THAP7Q9BT49 309 aaPredicted RBP4.58□□□□□ -1.68
SMAD4-202ENST00000398417 HCAR1Q9BXC0 346 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 TPSD1Q9BZJ3 242 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 NXF2Q9GZY0 626 aaKnown RBP4.58□□□□□ -1.68
SMAD4-202ENST00000398417 TMEM168Q9H0V1 697 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 ABCG5Q9H222 651 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms