RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 MERTKQ12866 999 aa19.25■□□□□ 0.67
CPNE1-204ENST00000397443 TOMM20Q15388 145 aa19.25■□□□□ 0.67
CPNE1-204ENST00000397443 KDM4DQ6B0I6 523 aa19.25■□□□□ 0.67
CPNE1-204ENST00000397443 FAHD1Q6P587 224 aa19.25■□□□□ 0.67
CPNE1-204ENST00000397443 ZER1Q7Z7L7 766 aa19.25■□□□□ 0.67
CPNE1-204ENST00000397443 OR5M1Q8NGP8 315 aa19.25■□□□□ 0.67
CPNE1-204ENST00000397443 ZNF556Q9HAH1 456 aa19.25■□□□□ 0.67
CPNE1-204ENST00000397443 MED17Q9NVC6 651 aa19.25■□□□□ 0.67
CPNE1-204ENST00000397443 SMPD3Q9NY59 655 aaPredicted RBP19.25■□□□□ 0.67
CPNE1-204ENST00000397443 ORC6Q9Y5N6 252 aa19.25■□□□□ 0.67
CPNE1-204ENST00000397443 IGLV3-32A0A0A0MS00 114 aa19.24■□□□□ 0.67
CPNE1-204ENST00000397443 PINLYPA6NC86 204 aa19.24■□□□□ 0.67
CPNE1-204ENST00000397443 DLGAP1O14490 977 aa19.24■□□□□ 0.67
CPNE1-204ENST00000397443 SNPHO15079 494 aa19.24■□□□□ 0.67
CPNE1-204ENST00000397443 SNX4O95219 450 aa19.24■□□□□ 0.67
CPNE1-204ENST00000397443 GPR4P46093 362 aa19.24■□□□□ 0.67
CPNE1-204ENST00000397443 SUMO3P55854 103 aaPredicted RBP19.24■□□□□ 0.67
CPNE1-204ENST00000397443 FOXK1P85037 733 aa19.24■□□□□ 0.67
CPNE1-204ENST00000397443 GK3PQ14409 553 aa19.24■□□□□ 0.67
CPNE1-204ENST00000397443 C6orf52Q5T4I8 152 aa19.24■□□□□ 0.67
CPNE1-204ENST00000397443 MBOAT2Q6ZWT7 520 aa19.24■□□□□ 0.67
CPNE1-204ENST00000397443 ATG4DQ86TL0 474 aaPredicted RBP19.24■□□□□ 0.67
CPNE1-204ENST00000397443 PIGXQ8TBF5 258 aa19.24■□□□□ 0.67
CPNE1-204ENST00000397443 ZNF597Q96LX8 424 aa19.24■□□□□ 0.67
CPNE1-204ENST00000397443 PTGES2Q9H7Z7 377 aa19.24■□□□□ 0.67
CPNE1-204ENST00000397443 C20orf141Q9NUB4 165 aa19.24■□□□□ 0.67
CPNE1-204ENST00000397443 RYDENQ9NUL5 291 aaKnown RBP19.24■□□□□ 0.67
CPNE1-204ENST00000397443 TUBA8Q9NY65 449 aaPredicted RBP19.24■□□□□ 0.67
CPNE1-204ENST00000397443 USE1Q9NZ43 259 aa19.24■□□□□ 0.67
CPNE1-204ENST00000397443 OSGIN1Q9UJX0 560 aa19.24■□□□□ 0.67
CPNE1-204ENST00000397443 MED19A0JLT2 244 aaPredicted RBP19.23■□□□□ 0.67
CPNE1-204ENST00000397443 ANXA8P13928 327 aa19.23■□□□□ 0.67
CPNE1-204ENST00000397443 PRKCAP17252 672 aa19.23■□□□□ 0.67
CPNE1-204ENST00000397443 CNR1P21554 472 aa19.23■□□□□ 0.67
CPNE1-204ENST00000397443 CBLP22681 906 aa19.23■□□□□ 0.67
CPNE1-204ENST00000397443 FOXF1Q12946 379 aa19.23■□□□□ 0.67
CPNE1-204ENST00000397443 TIGD3Q6B0B8 471 aa19.23■□□□□ 0.67
CPNE1-204ENST00000397443 TTC33Q6PID6 262 aaPredicted RBP19.23■□□□□ 0.67
CPNE1-204ENST00000397443 FADS6Q8N9I5 356 aa19.23■□□□□ 0.67
CPNE1-204ENST00000397443 CYGBQ8WWM9 190 aa19.23■□□□□ 0.67
CPNE1-204ENST00000397443 MPP4Q96JB8 637 aa19.23■□□□□ 0.67
CPNE1-204ENST00000397443 GPA33Q99795 319 aa19.23■□□□□ 0.67
CPNE1-204ENST00000397443 TOR3AQ9H497 397 aa19.23■□□□□ 0.67
CPNE1-204ENST00000397443 RIBC2Q9H4K1 309 aa19.23■□□□□ 0.67
CPNE1-204ENST00000397443 C8orf4Q9NR00 106 aa19.23■□□□□ 0.67
CPNE1-204ENST00000397443 RPH3AQ9Y2J0 694 aaPredicted RBP19.23■□□□□ 0.67
CPNE1-204ENST00000397443 TNRC6AQ8NDV7 1962 aaKnown RBP19.23■□□□□ 0.67
CPNE1-204ENST00000397443 A0A087WUJ7 227 aa19.23■□□□□ 0.67
CPNE1-204ENST00000397443 TRIM3O75382 744 aaPredicted RBP19.23■□□□□ 0.67
CPNE1-204ENST00000397443 HPRP00739 348 aa19.23■□□□□ 0.67
CPNE1-204ENST00000397443 IFI30P13284 250 aa19.23■□□□□ 0.67
CPNE1-204ENST00000397443 CXCR1P25024 350 aa19.23■□□□□ 0.67
CPNE1-204ENST00000397443 POLR2IP36954 125 aaKnown RBP19.23■□□□□ 0.67
CPNE1-204ENST00000397443 GALNTL5Q7Z4T8 443 aa19.23■□□□□ 0.67
CPNE1-204ENST00000397443 SULF2Q8IWU5 870 aa19.23■□□□□ 0.67
CPNE1-204ENST00000397443 ATP6V1C2Q8NEY4 427 aa19.23■□□□□ 0.67
CPNE1-204ENST00000397443 TMEM234Q8WY98 164 aa19.23■□□□□ 0.67
CPNE1-204ENST00000397443 C1GALT1C1Q96EU7 318 aa19.23■□□□□ 0.67
CPNE1-204ENST00000397443 ADAM19Q9H013 955 aa19.23■□□□□ 0.67
CPNE1-204ENST00000397443 MEPEQ9NQ76 525 aaPredicted RBP19.23■□□□□ 0.67
CPNE1-204ENST00000397443 PAPOLBQ9NRJ5 636 aaKnown RBP19.23■□□□□ 0.67
CPNE1-204ENST00000397443 MED31Q9Y3C7 131 aa19.23■□□□□ 0.67
CPNE1-204ENST00000397443 FREM3P0C091 2139 aa19.23■□□□□ 0.67
CPNE1-204ENST00000397443 PNMTP11086 282 aa19.22■□□□□ 0.67
CPNE1-204ENST00000397443 CRYZQ08257 329 aaKnown RBP19.22■□□□□ 0.67
CPNE1-204ENST00000397443 SWT1Q5T5J6 900 aaKnown RBP19.22■□□□□ 0.67
CPNE1-204ENST00000397443 GRINAQ7Z429 371 aa19.22■□□□□ 0.67
CPNE1-204ENST00000397443 MDS2Q8NDY4 140 aa19.22■□□□□ 0.67
CPNE1-204ENST00000397443 HAS2Q92819 552 aa19.22■□□□□ 0.67
CPNE1-204ENST00000397443 TMEM41AQ96HV5 264 aa19.22■□□□□ 0.67
CPNE1-204ENST00000397443 C5orf34Q96MH7 638 aa19.22■□□□□ 0.67
CPNE1-204ENST00000397443 DKKL1Q9UK85 242 aa19.22■□□□□ 0.67
CPNE1-204ENST00000397443 MGAT4BQ9UQ53 548 aa19.22■□□□□ 0.67
CPNE1-204ENST00000397443 CACNA1GO43497 2377 aa19.22■□□□□ 0.67
CPNE1-204ENST00000397443 ARRDC5A6NEK1 342 aa19.21■□□□□ 0.67
CPNE1-204ENST00000397443 FAM47E-STBD1D6RA91 191 aa19.21■□□□□ 0.67
CPNE1-204ENST00000397443 SOX14O95416 240 aa19.21■□□□□ 0.67
CPNE1-204ENST00000397443 SP1P08047 785 aa19.21■□□□□ 0.67
CPNE1-204ENST00000397443 RFPL3SP0C7P2 107 aa19.21■□□□□ 0.67
CPNE1-204ENST00000397443 FUT1P19526 365 aa19.21■□□□□ 0.67
CPNE1-204ENST00000397443 DPP4P27487 766 aa19.21■□□□□ 0.67
CPNE1-204ENST00000397443 HOXD11P31277 338 aaPredicted RBP19.21■□□□□ 0.67
CPNE1-204ENST00000397443 POLR2HP52434 150 aaKnown RBP19.21■□□□□ 0.67
CPNE1-204ENST00000397443 PLPPR5Q32ZL2 321 aa19.21■□□□□ 0.67
CPNE1-204ENST00000397443 SLC25A25Q6KCM7 469 aa19.21■□□□□ 0.67
CPNE1-204ENST00000397443 LINC00114Q6XXX2 140 aa19.21■□□□□ 0.67
CPNE1-204ENST00000397443 OR2M7Q8NG81 312 aa19.21■□□□□ 0.67
CPNE1-204ENST00000397443 HS6ST2Q96MM7 605 aa19.21■□□□□ 0.67
CPNE1-204ENST00000397443 TNFSF12-TNFSF13A0A0A6YY99 330 aa19.21■□□□□ 0.67
CPNE1-204ENST00000397443 TMED7-TICAM2A0A0A6YYA0 188 aa19.21■□□□□ 0.67
CPNE1-204ENST00000397443 LRRC3CA6NJW4 275 aa19.21■□□□□ 0.67
CPNE1-204ENST00000397443 K7ENP7 123 aa19.21■□□□□ 0.67
CPNE1-204ENST00000397443 CEACAM4O75871 244 aa19.21■□□□□ 0.67
CPNE1-204ENST00000397443 CD46P15529 392 aa19.21■□□□□ 0.67
CPNE1-204ENST00000397443 IFNGR2P38484 337 aa19.21■□□□□ 0.67
CPNE1-204ENST00000397443 OMPP47874 163 aa19.21■□□□□ 0.67
CPNE1-204ENST00000397443 CD97P48960 835 aa19.21■□□□□ 0.67
CPNE1-204ENST00000397443 RAD23AP54725 363 aa19.21■□□□□ 0.67
CPNE1-204ENST00000397443 INO80CQ6PI98 192 aaPredicted RBP19.21■□□□□ 0.67
CPNE1-204ENST00000397443 KLHL17Q6TDP4 642 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms