RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 NANSQ9NR45 359 aa22.23■■□□□ 1.15
CSNK1E-203ENST00000396832 GPR160Q9UJ42 338 aa22.23■■□□□ 1.15
CSNK1E-203ENST00000396832 FBXL4Q9UKA2 621 aa22.23■■□□□ 1.15
CSNK1E-203ENST00000396832 NPIPA5A0A0B4J1W7 369 aa22.22■■□□□ 1.15
CSNK1E-203ENST00000396832 OR52A4PA6NMU1 304 aa22.22■■□□□ 1.15
CSNK1E-203ENST00000396832 CHURC1-FNTBB4DL54 471 aa22.22■■□□□ 1.15
CSNK1E-203ENST00000396832 NPIPA7E9PJI5 369 aa22.22■■□□□ 1.15
CSNK1E-203ENST00000396832 SUSD5O60279 629 aa22.22■■□□□ 1.15
CSNK1E-203ENST00000396832 RHOP08100 348 aa22.22■■□□□ 1.15
CSNK1E-203ENST00000396832 NPIPA8P0DM63 369 aa22.22■■□□□ 1.15
CSNK1E-203ENST00000396832 EIF2B5Q13144 721 aaKnown RBP22.22■■□□□ 1.15
CSNK1E-203ENST00000396832 SLC9A5Q14940 896 aa22.22■■□□□ 1.15
CSNK1E-203ENST00000396832 TRAM1Q15629 374 aa22.22■■□□□ 1.15
CSNK1E-203ENST00000396832 FAM69AQ5T7M9 428 aa22.22■■□□□ 1.15
CSNK1E-203ENST00000396832 MEPCEQ7L2J0 689 aaKnown RBP22.22■■□□□ 1.15
CSNK1E-203ENST00000396832 PFN4Q8NHR9 129 aa22.22■■□□□ 1.15
CSNK1E-203ENST00000396832 HMGB4Q8WW32 186 aa22.22■■□□□ 1.15
CSNK1E-203ENST00000396832 IFT27Q9BW83 186 aa22.22■■□□□ 1.15
CSNK1E-203ENST00000396832 KCNK6Q9Y257 313 aa22.22■■□□□ 1.15
CSNK1E-203ENST00000396832 TP53BP1Q12888 1972 aaPredicted RBP22.22■■□□□ 1.15
CSNK1E-203ENST00000396832 J3QLW9 94 aa22.22■■□□□ 1.15
CSNK1E-203ENST00000396832 GALR3O60755 368 aaPredicted RBP22.22■■□□□ 1.15
CSNK1E-203ENST00000396832 SAGP10523 405 aaPredicted RBP22.22■■□□□ 1.15
CSNK1E-203ENST00000396832 ZNF19P17023 458 aa22.22■■□□□ 1.15
CSNK1E-203ENST00000396832 S100A11P31949 105 aa22.22■■□□□ 1.15
CSNK1E-203ENST00000396832 GID4Q8IVV7 300 aa22.22■■□□□ 1.15
CSNK1E-203ENST00000396832 OR4N5Q8IXE1 308 aa22.22■■□□□ 1.15
CSNK1E-203ENST00000396832 SPICQ8N5J4 248 aa22.22■■□□□ 1.15
CSNK1E-203ENST00000396832 VWCEQ96DN2 955 aa22.22■■□□□ 1.15
CSNK1E-203ENST00000396832 SLC41A3Q96GZ6 507 aa22.22■■□□□ 1.15
CSNK1E-203ENST00000396832 DEFB118Q96PH6 123 aa22.22■■□□□ 1.15
CSNK1E-203ENST00000396832 ABRACLQ9P1F3 81 aa22.22■■□□□ 1.15
CSNK1E-203ENST00000396832 RP2O75695 350 aa22.21■■□□□ 1.15
CSNK1E-203ENST00000396832 SC5DO75845 299 aa22.21■■□□□ 1.15
CSNK1E-203ENST00000396832 ACRP10323 421 aa22.21■■□□□ 1.15
CSNK1E-203ENST00000396832 EPXP11678 715 aa22.21■■□□□ 1.15
CSNK1E-203ENST00000396832 CD53P19397 219 aa22.21■■□□□ 1.15
CSNK1E-203ENST00000396832 NDUFV2P19404 249 aa22.21■■□□□ 1.15
CSNK1E-203ENST00000396832 NIPAL3Q6P499 406 aa22.21■■□□□ 1.15
CSNK1E-203ENST00000396832 LINGO2Q7L985 606 aa22.21■■□□□ 1.15
CSNK1E-203ENST00000396832 SHISA5Q8N114 240 aa22.21■■□□□ 1.15
CSNK1E-203ENST00000396832 ZNF454Q8N9F8 522 aa22.21■■□□□ 1.15
CSNK1E-203ENST00000396832 ACOT4Q8N9L9 421 aa22.21■■□□□ 1.15
CSNK1E-203ENST00000396832 SLC16A11Q8NCK7 471 aa22.21■■□□□ 1.15
CSNK1E-203ENST00000396832 UBQLN3Q9H347 655 aa22.21■■□□□ 1.15
CSNK1E-203ENST00000396832 LILRB3O75022 631 aa22.21■■□□□ 1.15
CSNK1E-203ENST00000396832 SLC35G4P0C7Q5 338 aa22.21■■□□□ 1.15
CSNK1E-203ENST00000396832 LAG3P18627 525 aa22.21■■□□□ 1.15
CSNK1E-203ENST00000396832 RAP2BP61225 183 aa22.21■■□□□ 1.15
CSNK1E-203ENST00000396832 HSD17B13Q7Z5P4 300 aaPredicted RBP22.21■■□□□ 1.15
CSNK1E-203ENST00000396832 ACOT11Q8WXI4 607 aaPredicted RBP22.21■■□□□ 1.15
CSNK1E-203ENST00000396832 MENTQ9BUN1 341 aa22.21■■□□□ 1.15
CSNK1E-203ENST00000396832 CCDC86Q9H6F5 360 aaKnown RBP22.21■■□□□ 1.15
CSNK1E-203ENST00000396832 PELI2Q9HAT8 420 aa22.21■■□□□ 1.15
CSNK1E-203ENST00000396832 C20orf141Q9NUB4 165 aa22.21■■□□□ 1.15
CSNK1E-203ENST00000396832 PRELID3BQ9Y3B1 194 aa22.21■■□□□ 1.15
CSNK1E-203ENST00000396832 PLEKHM1Q9Y4G2 1056 aa22.21■■□□□ 1.15
CSNK1E-203ENST00000396832 DNASE2O00115 360 aaPredicted RBP22.21■■□□□ 1.15
CSNK1E-203ENST00000396832 ARPC5O15511 151 aa22.21■■□□□ 1.15
CSNK1E-203ENST00000396832 PRG2P13727 222 aa22.21■■□□□ 1.15
CSNK1E-203ENST00000396832 DHCR24Q15392 516 aa22.21■■□□□ 1.15
CSNK1E-203ENST00000396832 FAM111BQ6SJ93 734 aa22.21■■□□□ 1.15
CSNK1E-203ENST00000396832 SLC44A3Q8N4M1 653 aa22.21■■□□□ 1.15
CSNK1E-203ENST00000396832 CLRN3Q8NCR9 226 aa22.21■■□□□ 1.15
CSNK1E-203ENST00000396832 C4orf36Q96KX1 117 aa22.21■■□□□ 1.15
CSNK1E-203ENST00000396832 ZBP1Q9H171 429 aa22.21■■□□□ 1.15
CSNK1E-203ENST00000396832 ZMIZ1Q9ULJ6 1067 aa22.21■■□□□ 1.15
CSNK1E-203ENST00000396832 KNL1Q8NG31 2342 aa22.21■■□□□ 1.15
CSNK1E-203ENST00000396832 A0A0G2JPF8 293 aa22.2■■□□□ 1.14
CSNK1E-203ENST00000396832 HNRNPCL3B7ZW38 293 aa22.2■■□□□ 1.14
CSNK1E-203ENST00000396832 CTDSPLO15194 276 aa22.2■■□□□ 1.14
CSNK1E-203ENST00000396832 LDOC1O95751 146 aaPredicted RBP22.2■■□□□ 1.14
CSNK1E-203ENST00000396832 ZGLP1P0C6A0 271 aa22.2■■□□□ 1.14
CSNK1E-203ENST00000396832 HNRNPCL4P0DMR1 293 aa22.2■■□□□ 1.14
CSNK1E-203ENST00000396832 CBX5P45973 191 aa22.2■■□□□ 1.14
CSNK1E-203ENST00000396832 HCCSP53701 268 aa22.2■■□□□ 1.14
CSNK1E-203ENST00000396832 B3GNTL1Q67FW5 361 aaPredicted RBP22.2■■□□□ 1.14
CSNK1E-203ENST00000396832 NHLRC1Q6VVB1 395 aa22.2■■□□□ 1.14
CSNK1E-203ENST00000396832 GLDNQ6ZMI3 551 aaPredicted RBP22.2■■□□□ 1.14
CSNK1E-203ENST00000396832 GHSRQ92847 366 aa22.2■■□□□ 1.14
CSNK1E-203ENST00000396832 CDS1Q92903 461 aa22.2■■□□□ 1.14
CSNK1E-203ENST00000396832 PGLYRP3Q96LB9 341 aa22.2■■□□□ 1.14
CSNK1E-203ENST00000396832 TMPRSS13Q9BYE2 586 aa22.2■■□□□ 1.14
CSNK1E-203ENST00000396832 NOX3Q9HBY0 568 aa22.2■■□□□ 1.14
CSNK1E-203ENST00000396832 HPF1Q9NWY4 346 aa22.2■■□□□ 1.14
CSNK1E-203ENST00000396832 NTMQ9P121 344 aa22.2■■□□□ 1.14
CSNK1E-203ENST00000396832 KDM4BO94953 1096 aa22.2■■□□□ 1.14
CSNK1E-203ENST00000396832 ZNF77Q15935 545 aa22.2■■□□□ 1.14
CSNK1E-203ENST00000396832 BAIAP2L2Q6UXY1 529 aa22.2■■□□□ 1.14
CSNK1E-203ENST00000396832 TMUB2Q71RG4 321 aa22.2■■□□□ 1.14
CSNK1E-203ENST00000396832 RFLNBQ8N5W9 214 aa22.2■■□□□ 1.14
CSNK1E-203ENST00000396832 OR1S1Q8NH92 325 aa22.2■■□□□ 1.14
CSNK1E-203ENST00000396832 ORAI1Q96D31 301 aa22.2■■□□□ 1.14
CSNK1E-203ENST00000396832 GMEB2Q9UKD1 530 aa22.2■■□□□ 1.14
CSNK1E-203ENST00000396832 C17orf113A0A1B0GUU1 675 aa22.19■■□□□ 1.14
CSNK1E-203ENST00000396832 KLF4O43474 513 aa22.19■■□□□ 1.14
CSNK1E-203ENST00000396832 ADRB1P08588 477 aa22.19■■□□□ 1.14
CSNK1E-203ENST00000396832 IFNGR1P15260 489 aa22.19■■□□□ 1.14
CSNK1E-203ENST00000396832 NOS3P29474 1203 aa22.19■■□□□ 1.14
CSNK1E-203ENST00000396832 CALCRP30988 508 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms