RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 NSDHLQ15738 373 aa13.72□□□□□ -0.21
CBX3-202ENST00000396386 CD226Q15762 336 aa13.72□□□□□ -0.21
CBX3-202ENST00000396386 ZNF791Q3KP31 576 aaPredicted RBP13.72□□□□□ -0.21
CBX3-202ENST00000396386 PLK5Q496M5 336 aa13.72□□□□□ -0.21
CBX3-202ENST00000396386 VWA2Q5GFL6 755 aa13.72□□□□□ -0.21
CBX3-202ENST00000396386 RTL4Q6ZR62 310 aa13.72□□□□□ -0.21
CBX3-202ENST00000396386 WDR5BQ86VZ2 330 aa13.72□□□□□ -0.21
CBX3-202ENST00000396386 PHOSPHO1Q8TCT1 267 aa13.72□□□□□ -0.21
CBX3-202ENST00000396386 DAZLQ92904 295 aaKnown RBP13.72□□□□□ -0.21
CBX3-202ENST00000396386 ADIPOR1Q96A54 375 aa13.72□□□□□ -0.21
CBX3-202ENST00000396386 C3orf49Q96BT1 292 aa13.72□□□□□ -0.21
CBX3-202ENST00000396386 TNFRSF13CQ96RJ3 184 aa13.72□□□□□ -0.21
CBX3-202ENST00000396386 NUDT9Q9BW91 350 aa13.72□□□□□ -0.21
CBX3-202ENST00000396386 NUAK2Q9H093 628 aa13.72□□□□□ -0.21
CBX3-202ENST00000396386 TXNL4BQ9NX01 149 aaKnown RBP13.72□□□□□ -0.21
CBX3-202ENST00000396386 TOR4AQ9NXH8 423 aa13.72□□□□□ -0.21
CBX3-202ENST00000396386 ETAA1Q9NY74 926 aa13.72□□□□□ -0.21
CBX3-202ENST00000396386 CRNNQ9UBG3 495 aaPredicted RBP13.72□□□□□ -0.21
CBX3-202ENST00000396386 COPS7AQ9UBW8 275 aa13.72□□□□□ -0.21
CBX3-202ENST00000396386 MUTYHQ9UIF7 546 aa13.72□□□□□ -0.21
CBX3-202ENST00000396386 DAPK2Q9UIK4 370 aa13.72□□□□□ -0.21
CBX3-202ENST00000396386 A0A075B6Q4 140 aa13.72□□□□□ -0.21
CBX3-202ENST00000396386 A0A1B0GTQ1 180 aa13.72□□□□□ -0.21
CBX3-202ENST00000396386 PNMA8CA0A1B0GUJ8 204 aa13.72□□□□□ -0.21
CBX3-202ENST00000396386 C2orf92A0A1B0GVN3 265 aa13.72□□□□□ -0.21
CBX3-202ENST00000396386 J3QRE1 110 aa13.72□□□□□ -0.21
CBX3-202ENST00000396386 SLC30A4O14863 429 aa13.72□□□□□ -0.21
CBX3-202ENST00000396386 CBFA2T3O75081 653 aa13.72□□□□□ -0.21
CBX3-202ENST00000396386 NDUFB2O95178 105 aa13.72□□□□□ -0.21
CBX3-202ENST00000396386 NOS3P29474 1203 aa13.72□□□□□ -0.21
CBX3-202ENST00000396386 GABRA5P31644 462 aa13.72□□□□□ -0.21
CBX3-202ENST00000396386 ACSM1Q08AH1 577 aa13.72□□□□□ -0.21
CBX3-202ENST00000396386 FHL1Q13642 323 aa13.72□□□□□ -0.21
CBX3-202ENST00000396386 EBPQ15125 230 aaKnown RBP13.72□□□□□ -0.21
CBX3-202ENST00000396386 HLA-DQA1Q5Y7H0 255 aa13.72□□□□□ -0.21
CBX3-202ENST00000396386 WBP2NLQ6ICG8 309 aa13.72□□□□□ -0.21
CBX3-202ENST00000396386 PRSS58Q8IYP2 241 aa13.72□□□□□ -0.21
CBX3-202ENST00000396386 SLC37A3Q8NCC5 494 aa13.72□□□□□ -0.21
CBX3-202ENST00000396386 KISS1RQ969F8 398 aaPredicted RBP13.72□□□□□ -0.21
CBX3-202ENST00000396386 HCAR1Q9BXC0 346 aa13.72□□□□□ -0.21
CBX3-202ENST00000396386 SLC19A3Q9BZV2 496 aa13.72□□□□□ -0.21
CBX3-202ENST00000396386 VN1R1Q9GZP7 353 aa13.72□□□□□ -0.21
CBX3-202ENST00000396386 SMURF1Q9HCE7 757 aa13.72□□□□□ -0.21
CBX3-202ENST00000396386 GALNT8Q9NY28 637 aa13.72□□□□□ -0.21
CBX3-202ENST00000396386 ATXN7L1Q9ULK2 861 aaPredicted RBP13.72□□□□□ -0.21
CBX3-202ENST00000396386 TRIOO75962 3097 aa13.71□□□□□ -0.21
CBX3-202ENST00000396386 CCDC182A6NF36 153 aa13.71□□□□□ -0.21
CBX3-202ENST00000396386 SAGE2PA6NJ88 616 aa13.71□□□□□ -0.21
CBX3-202ENST00000396386 ELOA3DA6NLF2 546 aaPredicted RBP13.71□□□□□ -0.21
CBX3-202ENST00000396386 ANKRD34CP0C6C1 535 aa13.71□□□□□ -0.21
CBX3-202ENST00000396386 PEPDP12955 493 aa13.71□□□□□ -0.21
CBX3-202ENST00000396386 IL12BP29460 328 aa13.71□□□□□ -0.21
CBX3-202ENST00000396386 CCR4P51679 360 aa13.71□□□□□ -0.21
CBX3-202ENST00000396386 RPS7P62081 194 aaKnown RBP13.71□□□□□ -0.21
CBX3-202ENST00000396386 ZNF45Q02386 682 aa13.71□□□□□ -0.21
CBX3-202ENST00000396386 ACY1Q03154 408 aa13.71□□□□□ -0.21
CBX3-202ENST00000396386 CRMP1Q14194 572 aa13.71□□□□□ -0.21
CBX3-202ENST00000396386 ELOA3BQ3SY89 546 aa13.71□□□□□ -0.21
CBX3-202ENST00000396386 KLHL12Q53G59 568 aa13.71□□□□□ -0.21
CBX3-202ENST00000396386 PERM1Q5SV97 790 aa13.71□□□□□ -0.21
CBX3-202ENST00000396386 FCRLBQ6BAA4 426 aa13.71□□□□□ -0.21
CBX3-202ENST00000396386 GUSBP11Q6P575 273 aa13.71□□□□□ -0.21
CBX3-202ENST00000396386 ACBD7Q8N6N7 88 aa13.71□□□□□ -0.21
CBX3-202ENST00000396386 ELOA3Q8NG57 546 aa13.71□□□□□ -0.21
CBX3-202ENST00000396386 SPRYD4Q8WW59 207 aaPredicted RBP13.71□□□□□ -0.21
CBX3-202ENST00000396386 LRFN5Q96NI6 719 aa13.71□□□□□ -0.21
CBX3-202ENST00000396386 ZNF649Q9BS31 505 aa13.71□□□□□ -0.21
CBX3-202ENST00000396386 SLC7A5P2Q9GIP4 190 aa13.71□□□□□ -0.21
CBX3-202ENST00000396386 PRMT8Q9NR22 394 aaPredicted RBP13.71□□□□□ -0.21
CBX3-202ENST00000396386 MKL2Q9ULH7 1088 aa13.71□□□□□ -0.21
CBX3-202ENST00000396386 CAB39Q9Y376 341 aaPredicted RBP13.71□□□□□ -0.21
CBX3-202ENST00000396386 SF3B6Q9Y3B4 125 aaKnown RBP13.71□□□□□ -0.21
CBX3-202ENST00000396386 DNAH14Q0VDD8 3507 aa13.7□□□□□ -0.22
CBX3-202ENST00000396386 ZC3H12DA2A288 527 aaKnown RBP13.7□□□□□ -0.22
CBX3-202ENST00000396386 CPED1A4D0V7 1026 aa13.7□□□□□ -0.22
CBX3-202ENST00000396386 C12orf71A8MTZ7 269 aa13.7□□□□□ -0.22
CBX3-202ENST00000396386 GTPBP1O00178 669 aaKnown RBP13.7□□□□□ -0.22
CBX3-202ENST00000396386 PLD2O14939 933 aa13.7□□□□□ -0.22
CBX3-202ENST00000396386 ZNF264O43296 627 aa13.7□□□□□ -0.22
CBX3-202ENST00000396386 OIP5O43482 229 aa13.7□□□□□ -0.22
CBX3-202ENST00000396386 OR7A10O76100 309 aa13.7□□□□□ -0.22
CBX3-202ENST00000396386 IL1AP01583 271 aa13.7□□□□□ -0.22
CBX3-202ENST00000396386 PNMTP11086 282 aa13.7□□□□□ -0.22
CBX3-202ENST00000396386 RPS19P39019 145 aaKnown RBP13.7□□□□□ -0.22
CBX3-202ENST00000396386 RORCP51449 518 aa13.7□□□□□ -0.22
CBX3-202ENST00000396386 SQSTM1Q13501 440 aa13.7□□□□□ -0.22
CBX3-202ENST00000396386 TRIM16LQ309B1 348 aa13.7□□□□□ -0.22
CBX3-202ENST00000396386 C22orf42Q6IC83 251 aa13.7□□□□□ -0.22
CBX3-202ENST00000396386 ZNF322Q6U7Q0 402 aaPredicted RBP13.7□□□□□ -0.22
CBX3-202ENST00000396386 TMPRSS11AQ6ZMR5 421 aa13.7□□□□□ -0.22
CBX3-202ENST00000396386 SLC29A4Q7RTT9 530 aa13.7□□□□□ -0.22
CBX3-202ENST00000396386 RABEPKQ7Z6M1 372 aa13.7□□□□□ -0.22
CBX3-202ENST00000396386 C9orf40Q8IXQ3 194 aa13.7□□□□□ -0.22
CBX3-202ENST00000396386 PRR22Q8IZ63 422 aa13.7□□□□□ -0.22
CBX3-202ENST00000396386 MINDY2Q8NBR6 621 aa13.7□□□□□ -0.22
CBX3-202ENST00000396386 TMEM203Q969S6 136 aa13.7□□□□□ -0.22
CBX3-202ENST00000396386 MROQ9BYG7 248 aa13.7□□□□□ -0.22
CBX3-202ENST00000396386 WWTR1Q9GZV5 400 aa13.7□□□□□ -0.22
CBX3-202ENST00000396386 INPP5EQ9NRR6 644 aa13.7□□□□□ -0.22
CBX3-202ENST00000396386 SNTG1Q9NSN8 517 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms