RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 CBLL1Q75N03 491 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 AGAP4Q96P64 663 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 ATOH8Q96SQ7 321 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 RTP3Q9BQQ7 232 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 DDX60LQ5H9U9 1706 aaKnown RBP5.11□□□□□ -1.59
VPS13C-204ENST00000395898 A0A0A6YYC8 382 aaPredicted RBP5.11□□□□□ -1.59
VPS13C-204ENST00000395898 I3L1I5 382 aaPredicted RBP5.11□□□□□ -1.59
VPS13C-204ENST00000395898 CHRM4P08173 479 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 HTR2BP41595 481 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 MRPL2Q5T653 305 aaKnown RBP5.11□□□□□ -1.59
VPS13C-204ENST00000395898 SFRP4Q6FHJ7 346 aaPredicted RBP5.11□□□□□ -1.59
VPS13C-204ENST00000395898 PARS2Q7L3T8 475 aaKnown RBP5.11□□□□□ -1.59
VPS13C-204ENST00000395898 OR1S1Q8NH92 325 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 FNDC9Q8TBE3 224 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 CPT1CQ8TCG5 803 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 PSMF1Q92530 271 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 ZNF566Q969W8 418 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 KIF25Q9UIL4 384 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 ZNF281Q9Y2X9 895 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 OR6C6A6NF89 314 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 CNMDO75829 334 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 RPS5P46782 204 aaKnown RBP5.1□□□□□ -1.59
VPS13C-204ENST00000395898 AMIGO3Q86WK7 504 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 CYB561A3Q8NBI2 242 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 DRAXINQ8NBI3 349 aaPredicted RBP5.1□□□□□ -1.59
VPS13C-204ENST00000395898 NLGN4YQ8NFZ3 816 aaPredicted RBP5.1□□□□□ -1.59
VPS13C-204ENST00000395898 VN1R2Q8NFZ6 395 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 OR1J4Q8NGS1 313 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 PRR11Q96HE9 360 aaPredicted RBP5.1□□□□□ -1.59
VPS13C-204ENST00000395898 FER1L6-AS2Q96M78 137 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 COQ10AQ96MF6 247 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 HHIPQ96QV1 700 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 NT5DC2Q9H857 520 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 SAGE1Q9NXZ1 904 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 F8W036 122 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 IFNA17P01571 189 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 ECI1P42126 302 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 BLOC1S1P78537 153 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 DCDP81605 110 aaKnown RBP5.1□□□□□ -1.59
VPS13C-204ENST00000395898 ZXDBP98169 803 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 PKDCCQ504Y2 493 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 CTSL3PQ5NE16 218 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 GTF2H4Q92759 462 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 TAAR8Q969N4 342 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 ULBP3Q9BZM4 244 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 MRPL15Q9P015 296 aaKnown RBP5.1□□□□□ -1.59
VPS13C-204ENST00000395898 RP1P56715 2156 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 MYO7AQ13402 2215 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 hCG_1809904A0A1W2PP81 198 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 A0A1W2PPE2 198 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 A0A1W2PR64 198 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 A0A1W2PRV1 198 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 FUOMA2VDF0 154 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 APOC3P02656 99 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 OR2T7P0C7T2 308 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 AQP2P41181 271 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 LUMP51884 338 aaPredicted RBP5.1□□□□□ -1.59
VPS13C-204ENST00000395898 SNU13P55769 128 aaKnown RBP5.1□□□□□ -1.59
VPS13C-204ENST00000395898 ZNF791Q3KP31 576 aaPredicted RBP5.1□□□□□ -1.59
VPS13C-204ENST00000395898 PLCXD3Q63HM9 321 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 CFAP77Q6ZQR2 320 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 PRR22Q8IZ63 422 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 OR51L1Q8NGJ5 315 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 OR2T35Q8NGX2 323 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 OR2T27Q8NH04 317 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 HDAC8Q9BY41 377 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 TRAPPC2LH3BP13 241 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 GPR137BO60478 399 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 BDKRB2P30411 391 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 CLDN2P57739 230 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 FAM189BP81408 668 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 MS4A2Q01362 244 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 TSPAN31Q12999 210 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 RBM39Q14498 530 aaKnown RBP5.1□□□□□ -1.59
VPS13C-204ENST00000395898 SLC5A12Q1EHB4 618 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 ZNF789Q5FWF6 425 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 TP53INP2Q8IXH6 220 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 PPIL3Q9H2H8 161 aaKnown RBP5.1□□□□□ -1.59
VPS13C-204ENST00000395898 PRMT8Q9NR22 394 aaPredicted RBP5.1□□□□□ -1.59
VPS13C-204ENST00000395898 HCFC2Q9Y5Z7 792 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 NHSQ6T4R5 1651 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 DVL2O14641 736 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 AQP9O43315 295 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 LCKP06239 509 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 OPRL1P41146 370 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 HTR6P50406 440 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 TBCEQ15813 527 aaPredicted RBP5.1□□□□□ -1.59
VPS13C-204ENST00000395898 FCRLBQ6BAA4 426 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 KLHDC8BQ8IXV7 354 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 AGBL5Q8NDL9 886 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 SNX18Q96RF0 628 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 HINT2Q9BX68 163 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 SLC19A3Q9BZV2 496 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 SEMA6CQ9H3T2 930 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 C19orf12Q9NSK7 152 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 BABAM2Q9NXR7 383 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 LHX3Q9UBR4 397 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 ZFC3H1O60293 1989 aaKnown RBP5.1□□□□□ -1.59
VPS13C-204ENST00000395898 OPRD1P41143 372 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 MSMO1Q15800 293 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms