RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 EXOSC6Q5RKV6 272 aaKnown RBP16.47■□□□□ 0.23
SREBF1-204ENST00000395756 SLC35F3Q8IY50 421 aa16.47■□□□□ 0.23
SREBF1-204ENST00000395756 C10orf53Q8N6V4 93 aa16.47■□□□□ 0.23
SREBF1-204ENST00000395756 OR4K13Q8NH42 304 aa16.47■□□□□ 0.23
SREBF1-204ENST00000395756 OR4C6Q8NH72 309 aa16.47■□□□□ 0.23
SREBF1-204ENST00000395756 UFD1Q92890 307 aa16.47■□□□□ 0.23
SREBF1-204ENST00000395756 ZNF559Q9BR84 538 aa16.47■□□□□ 0.23
SREBF1-204ENST00000395756 SIGLEC7Q9Y286 467 aa16.47■□□□□ 0.23
SREBF1-204ENST00000395756 SNX4O95219 450 aa16.46■□□□□ 0.23
SREBF1-204ENST00000395756 DLGAP3O95886 979 aa16.46■□□□□ 0.23
SREBF1-204ENST00000395756 TNFSF8P32971 234 aa16.46■□□□□ 0.23
SREBF1-204ENST00000395756 ZP2Q05996 745 aa16.46■□□□□ 0.23
SREBF1-204ENST00000395756 RUNX1T1Q06455 604 aa16.46■□□□□ 0.23
SREBF1-204ENST00000395756 CRMP1Q14194 572 aa16.46■□□□□ 0.23
SREBF1-204ENST00000395756 NXNL2Q5VZ03 156 aa16.46■□□□□ 0.23
SREBF1-204ENST00000395756 MRGPREQ86SM8 312 aa16.46■□□□□ 0.23
SREBF1-204ENST00000395756 TMEM99Q8N816 258 aa16.46■□□□□ 0.23
SREBF1-204ENST00000395756 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.46■□□□□ 0.23
SREBF1-204ENST00000395756 SLC37A3Q8NCC5 494 aa16.46■□□□□ 0.23
SREBF1-204ENST00000395756 PHOSPHO1Q8TCT1 267 aa16.46■□□□□ 0.23
SREBF1-204ENST00000395756 PMEPA1Q969W9 287 aa16.46■□□□□ 0.23
SREBF1-204ENST00000395756 ADOQ96SZ5 270 aa16.46■□□□□ 0.23
SREBF1-204ENST00000395756 CRNNQ9UBG3 495 aaPredicted RBP16.46■□□□□ 0.23
SREBF1-204ENST00000395756 ZMAT5Q9UDW3 170 aaKnown RBP16.46■□□□□ 0.23
SREBF1-204ENST00000395756 ATXN7L1Q9ULK2 861 aaPredicted RBP16.46■□□□□ 0.23
SREBF1-204ENST00000395756 PEX16Q9Y5Y5 336 aa16.46■□□□□ 0.23
SREBF1-204ENST00000395756 BHLHE40O14503 412 aa16.46■□□□□ 0.23
SREBF1-204ENST00000395756 IMPA2O14732 288 aa16.46■□□□□ 0.23
SREBF1-204ENST00000395756 MSL3P1P0C860 447 aa16.46■□□□□ 0.23
SREBF1-204ENST00000395756 RORCP51449 518 aa16.46■□□□□ 0.23
SREBF1-204ENST00000395756 PRKCDQ05655 676 aa16.46■□□□□ 0.23
SREBF1-204ENST00000395756 STK11Q15831 433 aa16.46■□□□□ 0.23
SREBF1-204ENST00000395756 PRPF38BQ5VTL8 546 aaKnown RBP16.46■□□□□ 0.23
SREBF1-204ENST00000395756 CBLN3Q6UW01 205 aa16.46■□□□□ 0.23
SREBF1-204ENST00000395756 DPYSL5Q9BPU6 564 aa16.46■□□□□ 0.23
SREBF1-204ENST00000395756 KLHDC3Q9BQ90 382 aa16.46■□□□□ 0.23
SREBF1-204ENST00000395756 LMF2Q9BU23 707 aaKnown RBP16.46■□□□□ 0.23
SREBF1-204ENST00000395756 FGF20Q9NP95 211 aaPredicted RBP16.46■□□□□ 0.23
SREBF1-204ENST00000395756 CCDC59Q9P031 241 aaKnown RBP16.46■□□□□ 0.23
SREBF1-204ENST00000395756 ADAM18Q9Y3Q7 739 aa16.46■□□□□ 0.23
SREBF1-204ENST00000395756 ARID1BQ8NFD5 2236 aaPredicted RBP16.46■□□□□ 0.23
SREBF1-204ENST00000395756 LILRA5A6NI73 299 aa16.45■□□□□ 0.22
SREBF1-204ENST00000395756 PRR23D1E9PI22 279 aaPredicted RBP16.45■□□□□ 0.22
SREBF1-204ENST00000395756 UPK1BO75841 260 aa16.45■□□□□ 0.22
SREBF1-204ENST00000395756 PRR23D2P0DMB1 279 aaPredicted RBP16.45■□□□□ 0.22
SREBF1-204ENST00000395756 CPEP16870 476 aa16.45■□□□□ 0.22
SREBF1-204ENST00000395756 POU3F3P20264 500 aaPredicted RBP16.45■□□□□ 0.22
SREBF1-204ENST00000395756 HTR1FP30939 366 aa16.45■□□□□ 0.22
SREBF1-204ENST00000395756 RPL4P36578 427 aaKnown RBP16.45■□□□□ 0.22
SREBF1-204ENST00000395756 COPZ1P61923 177 aa16.45■□□□□ 0.22
SREBF1-204ENST00000395756 LYSMD2Q8IV50 215 aa16.45■□□□□ 0.22
SREBF1-204ENST00000395756 SDR9C7Q8NEX9 313 aa16.45■□□□□ 0.22
SREBF1-204ENST00000395756 CADM4Q8NFZ8 388 aa16.45■□□□□ 0.22
SREBF1-204ENST00000395756 OR1L3Q8NH93 324 aa16.45■□□□□ 0.22
SREBF1-204ENST00000395756 ERMAPQ96PL5 475 aaPredicted RBP16.45■□□□□ 0.22
SREBF1-204ENST00000395756 MESP1Q9BRJ9 268 aa16.45■□□□□ 0.22
SREBF1-204ENST00000395756 NUDT22Q9BRQ3 303 aa16.45■□□□□ 0.22
SREBF1-204ENST00000395756 MROQ9BYG7 248 aa16.45■□□□□ 0.22
SREBF1-204ENST00000395756 NXF5Q9H1B4 397 aaKnown RBP16.45■□□□□ 0.22
SREBF1-204ENST00000395756 FN3KQ9H479 309 aa16.45■□□□□ 0.22
SREBF1-204ENST00000395756 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.45■□□□□ 0.22
SREBF1-204ENST00000395756 THADAQ6YHU6 1953 aa16.45■□□□□ 0.22
SREBF1-204ENST00000395756 ZDBF2Q9HCK1 2354 aa16.45■□□□□ 0.22
SREBF1-204ENST00000395756 FAM86C2PA6NEL3 165 aa16.45■□□□□ 0.22
SREBF1-204ENST00000395756 ZNF670-ZNF695F2Z2N8 137 aa16.45■□□□□ 0.22
SREBF1-204ENST00000395756 RCBTB2O95199 551 aa16.45■□□□□ 0.22
SREBF1-204ENST00000395756 ATP12AP54707 1039 aa16.45■□□□□ 0.22
SREBF1-204ENST00000395756 OR52E2Q8NGJ4 325 aa16.45■□□□□ 0.22
SREBF1-204ENST00000395756 PTPMT1Q8WUK0 201 aaPredicted RBP16.45■□□□□ 0.22
SREBF1-204ENST00000395756 COLQQ9Y215 455 aaPredicted RBP16.45■□□□□ 0.22
SREBF1-204ENST00000395756 EXOSC1Q9Y3B2 195 aaKnown RBP16.45■□□□□ 0.22
SREBF1-204ENST00000395756 IGHV1OR21-1A0A087WYE8 117 aa16.45■□□□□ 0.22
SREBF1-204ENST00000395756 CPED1A4D0V7 1026 aa16.45■□□□□ 0.22
SREBF1-204ENST00000395756 SLC30A4O14863 429 aa16.45■□□□□ 0.22
SREBF1-204ENST00000395756 ZNF749O43361 778 aa16.45■□□□□ 0.22
SREBF1-204ENST00000395756 CHP2O43745 196 aa16.45■□□□□ 0.22
SREBF1-204ENST00000395756 DAB2P98082 770 aa16.45■□□□□ 0.22
SREBF1-204ENST00000395756 DSG2Q14126 1118 aa16.45■□□□□ 0.22
SREBF1-204ENST00000395756 NSDHLQ15738 373 aa16.45■□□□□ 0.22
SREBF1-204ENST00000395756 CD226Q15762 336 aa16.45■□□□□ 0.22
SREBF1-204ENST00000395756 TCTE1Q5JU00 501 aa16.45■□□□□ 0.22
SREBF1-204ENST00000395756 PLEKHG7Q6ZR37 379 aa16.45■□□□□ 0.22
SREBF1-204ENST00000395756 GPR135Q8IZ08 494 aa16.45■□□□□ 0.22
SREBF1-204ENST00000395756 ELMOD2Q8IZ81 293 aa16.45■□□□□ 0.22
SREBF1-204ENST00000395756 RNF113BQ8IZP6 322 aaKnown RBP16.45■□□□□ 0.22
SREBF1-204ENST00000395756 FAM98AQ8NCA5 519 aaKnown RBP16.45■□□□□ 0.22
SREBF1-204ENST00000395756 ARHGAP9Q9BRR9 750 aa16.45■□□□□ 0.22
SREBF1-204ENST00000395756 SMURF1Q9HCE7 757 aa16.45■□□□□ 0.22
SREBF1-204ENST00000395756 FAM171A2A8MVW0 826 aa16.44■□□□□ 0.22
SREBF1-204ENST00000395756 KHNYNO15037 678 aaKnown RBP16.44■□□□□ 0.22
SREBF1-204ENST00000395756 OIP5O43482 229 aa16.44■□□□□ 0.22
SREBF1-204ENST00000395756 PRKCAP17252 672 aa16.44■□□□□ 0.22
SREBF1-204ENST00000395756 CXCL12P48061 93 aa16.44■□□□□ 0.22
SREBF1-204ENST00000395756 ZNF613Q6PF04 617 aa16.44■□□□□ 0.22
SREBF1-204ENST00000395756 KLHL36Q8N4N3 616 aa16.44■□□□□ 0.22
SREBF1-204ENST00000395756 LSMEM1Q8N8F7 131 aa16.44■□□□□ 0.22
SREBF1-204ENST00000395756 ZNF615Q8N8J6 731 aa16.44■□□□□ 0.22
SREBF1-204ENST00000395756 TOR1AIP2Q8NFQ8 470 aa16.44■□□□□ 0.22
SREBF1-204ENST00000395756 C1orf216Q8TAB5 229 aa16.44■□□□□ 0.22
SREBF1-204ENST00000395756 TIGARQ9NQ88 270 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms